RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
SNRPD1-201ENST00000300413 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
SNRPD1-201ENST00000300413 DYNC1H1Q14204 4646 aaKnown RBP4.04□□□□□ -1.76
SNRPD1-201ENST00000300413 PRKDCP78527 4128 aaKnown RBP4.03□□□□□ -1.76
SNRPD1-201ENST00000300413 STARD9Q9P2P6 4700 aa4.03□□□□□ -1.76
SNRPD1-201ENST00000300413 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.76
SNRPD1-201ENST00000300413 P0C880 135 aa4.02□□□□□ -1.77
SNRPD1-201ENST00000300413 DYNC2H1Q8NCM8 4307 aaKnown RBP4.02□□□□□ -1.77
SNRPD1-201ENST00000300413 A6NN06 94 aa4.01□□□□□ -1.77
SNRPD1-201ENST00000300413 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
SNRPD1-201ENST00000300413 PRAC1Q96KF2 57 aa4□□□□□ -1.77
SNRPD1-201ENST00000300413 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
SNRPD1-201ENST00000300413 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
SNRPD1-201ENST00000300413 LRP1BQ9NZR2 4599 aa3.95□□□□□ -1.78
SNRPD1-201ENST00000300413 FAT2Q9NYQ8 4349 aa3.94□□□□□ -1.78
SNRPD1-201ENST00000300413 DNAH2Q9P225 4427 aa3.94□□□□□ -1.78
SNRPD1-201ENST00000300413 DNAH8Q96JB1 4490 aa3.9□□□□□ -1.79
SNRPD1-201ENST00000300413 FAT1Q14517 4588 aa3.89□□□□□ -1.79
SNRPD1-201ENST00000300413 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
SNRPD1-201ENST00000300413 KMT2AQ03164 3969 aa3.86□□□□□ -1.79
SNRPD1-201ENST00000300413 KIAA1109Q2LD37 5005 aa3.86□□□□□ -1.79
SNRPD1-201ENST00000300413 LYSTQ99698 3801 aa3.86□□□□□ -1.79
SNRPD1-201ENST00000300413 DNAH7Q8WXX0 4024 aa3.86□□□□□ -1.79
SNRPD1-201ENST00000300413 RYR2Q92736 4967 aa3.86□□□□□ -1.79
SNRPD1-201ENST00000300413 KRTAP10-6P60371 365 aaPredicted RBP3.85□□□□□ -1.79
SNRPD1-201ENST00000300413 RYR1P21817 5038 aa3.82□□□□□ -1.8
SNRPD1-201ENST00000300413 KRTAP12-1P59990 96 aa3.82□□□□□ -1.8
SNRPD1-201ENST00000300413 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
SNRPD1-201ENST00000300413 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
SNRPD1-201ENST00000300413 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
SNRPD1-201ENST00000300413 RYR3Q15413 4870 aa3.77□□□□□ -1.81
SNRPD1-201ENST00000300413 APOBP04114 4563 aaKnown RBP3.75□□□□□ -1.81
SNRPD1-201ENST00000300413 HYDINQ4G0P3 5121 aa3.74□□□□□ -1.81
SNRPD1-201ENST00000300413 MYCBP2O75592 4640 aa3.72□□□□□ -1.81
SNRPD1-201ENST00000300413 KRTAP4-1Q9BYQ7 146 aa3.71□□□□□ -1.81
SNRPD1-201ENST00000300413 KRTAP17-1Q9BYP8 105 aa3.71□□□□□ -1.82
SNRPD1-201ENST00000300413 KMT2CQ8NEZ4 4911 aaKnown RBP3.7□□□□□ -1.82
SNRPD1-201ENST00000300413 MT1HP80294 61 aa3.68□□□□□ -1.82
SNRPD1-201ENST00000300413 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
SNRPD1-201ENST00000300413 VPS13BQ7Z7G8 4022 aa3.68□□□□□ -1.82
SNRPD1-201ENST00000300413 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
SNRPD1-201ENST00000300413 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
SNRPD1-201ENST00000300413 LRP1Q07954 4544 aaKnown RBP3.66□□□□□ -1.82
SNRPD1-201ENST00000300413 PKHD1P08F94 4074 aa3.64□□□□□ -1.83
SNRPD1-201ENST00000300413 HSPG2P98160 4391 aa3.62□□□□□ -1.83
SNRPD1-201ENST00000300413 HERC2O95714 4834 aa3.61□□□□□ -1.83
SNRPD1-201ENST00000300413 PKD1P98161 4303 aa3.58□□□□□ -1.84
SNRPD1-201ENST00000300413 MT2AP02795 61 aa3.58□□□□□ -1.84
SNRPD1-201ENST00000300413 FRAS1Q86XX4 4008 aa3.58□□□□□ -1.84
SNRPD1-201ENST00000300413 SPRR2GQ9BYE4 73 aa3.58□□□□□ -1.84
SNRPD1-201ENST00000300413 HERC1Q15751 4861 aa3.56□□□□□ -1.84
SNRPD1-201ENST00000300413 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
SNRPD1-201ENST00000300413 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
SNRPD1-201ENST00000300413 PKHD1L1Q86WI1 4243 aa3.51□□□□□ -1.85
SNRPD1-201ENST00000300413 LRP2P98164 4655 aa3.5□□□□□ -1.85
SNRPD1-201ENST00000300413 MT1FP04733 61 aa3.49□□□□□ -1.85
SNRPD1-201ENST00000300413 EPPK1P58107 5090 aaKnown RBP3.48□□□□□ -1.85
SNRPD1-201ENST00000300413 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
SNRPD1-201ENST00000300413 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
SNRPD1-201ENST00000300413 KRTAP12-3P60328 96 aa3.4□□□□□ -1.86
SNRPD1-201ENST00000300413 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.87
SNRPD1-201ENST00000300413 TNXBP22105 4242 aa3.38□□□□□ -1.87
SNRPD1-201ENST00000300413 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
SNRPD1-201ENST00000300413 KRTAP8-1Q8IUC2 63 aa3.37□□□□□ -1.87
SNRPD1-201ENST00000300413 LCE3AQ5TA76 89 aa3.36□□□□□ -1.87
SNRPD1-201ENST00000300413 KRTAP9-8Q9BYQ0 159 aa3.36□□□□□ -1.87
SNRPD1-201ENST00000300413 KRTAP19-4Q3LI73 84 aa3.35□□□□□ -1.87
SNRPD1-201ENST00000300413 KRTAP19-1Q8IUB9 90 aa3.35□□□□□ -1.87
SNRPD1-201ENST00000300413 KRTAP19-2Q3LHN2 52 aa3.34□□□□□ -1.87
SNRPD1-201ENST00000300413 LPAP08519 4548 aa3.32□□□□□ -1.88
SNRPD1-201ENST00000300413 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
SNRPD1-201ENST00000300413 KRTAP9-3Q9BYQ3 159 aa3.29□□□□□ -1.88
SNRPD1-201ENST00000300413 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
SNRPD1-201ENST00000300413 RNF213Q63HN8 5207 aa3.26□□□□□ -1.89
SNRPD1-201ENST00000300413 MT1BP07438 61 aa3.24□□□□□ -1.89
SNRPD1-201ENST00000300413 MUC2Q02817 5179 aa3.21□□□□□ -1.9
SNRPD1-201ENST00000300413 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
SNRPD1-201ENST00000300413 FLGP20930 4061 aaPredicted RBP3.19□□□□□ -1.9
SNRPD1-201ENST00000300413 MT1XP80297 61 aa3.19□□□□□ -1.9
SNRPD1-201ENST00000300413 UBR4Q5T4S7 5183 aa3.18□□□□□ -1.9
SNRPD1-201ENST00000300413 HMCN2Q8NDA2 5059 aa3.17□□□□□ -1.9
SNRPD1-201ENST00000300413 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
SNRPD1-201ENST00000300413 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
SNRPD1-201ENST00000300413 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
SNRPD1-201ENST00000300413 KRTAP10-7P60409 375 aaPredicted RBP3.1□□□□□ -1.91
SNRPD1-201ENST00000300413 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
SNRPD1-201ENST00000300413 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
SNRPD1-201ENST00000300413 KRTAP9-2Q9BYQ4 174 aa3.05□□□□□ -1.92
SNRPD1-201ENST00000300413 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
SNRPD1-201ENST00000300413 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
SNRPD1-201ENST00000300413 INE1O15225 51 aa3.03□□□□□ -1.92
SNRPD1-201ENST00000300413 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
SNRPD1-201ENST00000300413 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
SNRPD1-201ENST00000300413 KRTAP9-7A8MTY7 169 aa3.01□□□□□ -1.93
SNRPD1-201ENST00000300413 SPRR2EP22531 72 aa3.01□□□□□ -1.93
SNRPD1-201ENST00000300413 SPRR2BP35325 72 aa3.01□□□□□ -1.93
SNRPD1-201ENST00000300413 SPRR2AP35326 72 aa3.01□□□□□ -1.93
SNRPD1-201ENST00000300413 MT1GP13640 62 aa2.99□□□□□ -1.93
SNRPD1-201ENST00000300413 LCE5AQ5TCM9 118 aa2.96□□□□□ -1.93
SNRPD1-201ENST00000300413 SPRR2DP22532 72 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms