RNA–Protein interactions for RNA: ENST00000299853.9

POLR3E-201, Transcript of RNA polymerase III subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR3E, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-201ENST00000299853 MYCBP2O75592 4640 aa6.66□□□□□ -1.34
POLR3E-201ENST00000299853 COX6B2Q6YFQ2 88 aa6.64□□□□□ -1.35
POLR3E-201ENST00000299853 PKHD1L1Q86WI1 4243 aa6.64□□□□□ -1.35
POLR3E-201ENST00000299853 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
POLR3E-201ENST00000299853 J3QL48 77 aa6.62□□□□□ -1.35
POLR3E-201ENST00000299853 KRTAP3-1Q9BYR8 98 aa6.6□□□□□ -1.35
POLR3E-201ENST00000299853 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
POLR3E-201ENST00000299853 HSPG2P98160 4391 aa6.55□□□□□ -1.36
POLR3E-201ENST00000299853 Q5VSD8 79 aa6.54□□□□□ -1.36
POLR3E-201ENST00000299853 FAT3Q8TDW7 4589 aa6.54□□□□□ -1.36
POLR3E-201ENST00000299853 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
POLR3E-201ENST00000299853 RYR3Q15413 4870 aa6.5□□□□□ -1.37
POLR3E-201ENST00000299853 KIAA1109Q2LD37 5005 aa6.49□□□□□ -1.37
POLR3E-201ENST00000299853 TNXBP22105 4242 aa6.49□□□□□ -1.37
POLR3E-201ENST00000299853 P0C880 135 aa6.46□□□□□ -1.38
POLR3E-201ENST00000299853 KRTAP10-8P60410 259 aa6.44□□□□□ -1.38
POLR3E-201ENST00000299853 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
POLR3E-201ENST00000299853 KRTAP17-1Q9BYP8 105 aa6.44□□□□□ -1.38
POLR3E-201ENST00000299853 S4R3F8 94 aa6.42□□□□□ -1.38
POLR3E-201ENST00000299853 RYR1P21817 5038 aa6.41□□□□□ -1.38
POLR3E-201ENST00000299853 TPRXLQ17RH7 258 aa6.4□□□□□ -1.38
POLR3E-201ENST00000299853 XP32Q5T750 250 aa6.39□□□□□ -1.39
POLR3E-201ENST00000299853 LPAP08519 4548 aa6.35□□□□□ -1.39
POLR3E-201ENST00000299853 LRP2P98164 4655 aa6.34□□□□□ -1.39
POLR3E-201ENST00000299853 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
POLR3E-201ENST00000299853 EPPK1P58107 5090 aaKnown RBP6.3□□□□□ -1.4
POLR3E-201ENST00000299853 KRTAP3-3Q9BYR6 98 aa6.29□□□□□ -1.4
POLR3E-201ENST00000299853 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
POLR3E-201ENST00000299853 A0A0A0MQY5 61 aa6.27□□□□□ -1.41
POLR3E-201ENST00000299853 M0QZ58 72 aa6.26□□□□□ -1.41
POLR3E-201ENST00000299853 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
POLR3E-201ENST00000299853 ABCA13Q86UQ4 5058 aa6.22□□□□□ -1.41
POLR3E-201ENST00000299853 R4GN34 69 aa6.21□□□□□ -1.42
POLR3E-201ENST00000299853 KRTAP3-2Q9BYR7 98 aa6.19□□□□□ -1.42
POLR3E-201ENST00000299853 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
POLR3E-201ENST00000299853 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
POLR3E-201ENST00000299853 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
POLR3E-201ENST00000299853 LUZP6Q538Z0 58 aa6□□□□□ -1.45
POLR3E-201ENST00000299853 KRTAP15-1Q3LI76 137 aa5.99□□□□□ -1.45
POLR3E-201ENST00000299853 HERC2O95714 4834 aa5.96□□□□□ -1.46
POLR3E-201ENST00000299853 MUC2Q02817 5179 aa5.95□□□□□ -1.46
POLR3E-201ENST00000299853 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
POLR3E-201ENST00000299853 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.46
POLR3E-201ENST00000299853 KRTAP4-1Q9BYQ7 146 aa5.9□□□□□ -1.46
POLR3E-201ENST00000299853 LORP23490 312 aaPredicted RBP5.89□□□□□ -1.47
POLR3E-201ENST00000299853 MUC17Q685J3 4493 aa5.88□□□□□ -1.47
POLR3E-201ENST00000299853 HERC1Q15751 4861 aa5.77□□□□□ -1.49
POLR3E-201ENST00000299853 M0R2T5 61 aa5.67□□□□□ -1.5
POLR3E-201ENST00000299853 FAT4Q6V0I7 4981 aa5.66□□□□□ -1.5
POLR3E-201ENST00000299853 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.5
POLR3E-201ENST00000299853 BIRC6Q9NR09 4857 aa5.64□□□□□ -1.51
POLR3E-201ENST00000299853 PCLOQ9Y6V0 5065 aa5.64□□□□□ -1.51
POLR3E-201ENST00000299853 FLGP20930 4061 aaPredicted RBP5.59□□□□□ -1.51
POLR3E-201ENST00000299853 RNF213Q63HN8 5207 aa5.56□□□□□ -1.52
POLR3E-201ENST00000299853 TNP1P09430 55 aa5.56□□□□□ -1.52
POLR3E-201ENST00000299853 HMCN2Q8NDA2 5059 aa5.54□□□□□ -1.52
POLR3E-201ENST00000299853 UBR4Q5T4S7 5183 aa5.45□□□□□ -1.54
POLR3E-201ENST00000299853 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
POLR3E-201ENST00000299853 LCE2CQ5TA81 110 aa5.37□□□□□ -1.55
POLR3E-201ENST00000299853 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
POLR3E-201ENST00000299853 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
POLR3E-201ENST00000299853 MT1HP80294 61 aa5.27□□□□□ -1.57
POLR3E-201ENST00000299853 KRTAP19-1Q8IUB9 90 aa5.25□□□□□ -1.57
POLR3E-201ENST00000299853 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
POLR3E-201ENST00000299853 MT1FP04733 61 aa5.21□□□□□ -1.58
POLR3E-201ENST00000299853 SPRR2GQ9BYE4 73 aa5.2□□□□□ -1.58
POLR3E-201ENST00000299853 MT2AP02795 61 aa5.18□□□□□ -1.58
POLR3E-201ENST00000299853 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
POLR3E-201ENST00000299853 KRTAP9-8Q9BYQ0 159 aa5.12□□□□□ -1.59
POLR3E-201ENST00000299853 MT1BP07438 61 aa4.98□□□□□ -1.61
POLR3E-201ENST00000299853 KMT2DO14686 5537 aa4.97□□□□□ -1.61
POLR3E-201ENST00000299853 USH2AO75445 5202 aa4.97□□□□□ -1.61
POLR3E-201ENST00000299853 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
POLR3E-201ENST00000299853 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
POLR3E-201ENST00000299853 FSIP2Q5CZC0 6907 aa4.95□□□□□ -1.62
POLR3E-201ENST00000299853 KRTAP10-5P60370 271 aa4.94□□□□□ -1.62
POLR3E-201ENST00000299853 MT1XP80297 61 aa4.94□□□□□ -1.62
POLR3E-201ENST00000299853 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
POLR3E-201ENST00000299853 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
POLR3E-201ENST00000299853 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
POLR3E-201ENST00000299853 OBSCNQ5VST9 7968 aa4.88□□□□□ -1.63
POLR3E-201ENST00000299853 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
POLR3E-201ENST00000299853 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
POLR3E-201ENST00000299853 LCE2BO14633 110 aa4.83□□□□□ -1.64
POLR3E-201ENST00000299853 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
POLR3E-201ENST00000299853 LCE2AQ5TA79 106 aaPredicted RBP4.8□□□□□ -1.64
POLR3E-201ENST00000299853 CRCT1Q9UGL9 99 aa4.71□□□□□ -1.66
POLR3E-201ENST00000299853 INE1O15225 51 aa4.67□□□□□ -1.66
POLR3E-201ENST00000299853 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
POLR3E-201ENST00000299853 DSTQ03001 7570 aaKnown RBP4.66□□□□□ -1.66
POLR3E-201ENST00000299853 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.66
POLR3E-201ENST00000299853 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.66
POLR3E-201ENST00000299853 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.66
POLR3E-201ENST00000299853 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
POLR3E-201ENST00000299853 FCGBPQ9Y6R7 5405 aaPredicted RBP4.59□□□□□ -1.67
POLR3E-201ENST00000299853 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
POLR3E-201ENST00000299853 SSPOA2VEC9 5147 aa4.45□□□□□ -1.7
POLR3E-201ENST00000299853 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
POLR3E-201ENST00000299853 KRTAP19-7Q3SYF9 63 aa4.4□□□□□ -1.71
POLR3E-201ENST00000299853 MUC12Q9UKN1 5478 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms