RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
FUBP1-201ENST00000294623 A0A0A0MQY5 61 aa7.19□□□□□ -1.26
FUBP1-201ENST00000294623 M0QZ58 72 aa7.18□□□□□ -1.26
FUBP1-201ENST00000294623 KMT2AQ03164 3969 aa7.17□□□□□ -1.26
FUBP1-201ENST00000294623 PKHD1L1Q86WI1 4243 aa7.12□□□□□ -1.27
FUBP1-201ENST00000294623 VPS13BQ7Z7G8 4022 aa7.1□□□□□ -1.27
FUBP1-201ENST00000294623 PKD1P98161 4303 aa7.09□□□□□ -1.27
FUBP1-201ENST00000294623 LUZP6Q538Z0 58 aa7.07□□□□□ -1.28
FUBP1-201ENST00000294623 PLAC4Q8WY50 150 aa6.99□□□□□ -1.29
FUBP1-201ENST00000294623 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
FUBP1-201ENST00000294623 FAT2Q9NYQ8 4349 aa6.96□□□□□ -1.3
FUBP1-201ENST00000294623 PKHD1P08F94 4074 aa6.96□□□□□ -1.3
FUBP1-201ENST00000294623 KRTAP10-8P60410 259 aa6.94□□□□□ -1.3
FUBP1-201ENST00000294623 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
FUBP1-201ENST00000294623 APOBP04114 4563 aaKnown RBP6.91□□□□□ -1.3
FUBP1-201ENST00000294623 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
FUBP1-201ENST00000294623 DMBT1Q9UGM3 2413 aaPredicted RBP6.87□□□□□ -1.31
FUBP1-201ENST00000294623 SMR3BP02814 79 aaPredicted RBP6.87□□□□□ -1.31
FUBP1-201ENST00000294623 BIRC6Q9NR09 4857 aa6.81□□□□□ -1.32
FUBP1-201ENST00000294623 LRP1Q07954 4544 aaKnown RBP6.8□□□□□ -1.32
FUBP1-201ENST00000294623 RYR3Q15413 4870 aa6.8□□□□□ -1.32
FUBP1-201ENST00000294623 TNXBP22105 4242 aa6.77□□□□□ -1.33
FUBP1-201ENST00000294623 KMT2CQ8NEZ4 4911 aaKnown RBP6.77□□□□□ -1.33
FUBP1-201ENST00000294623 FAT3Q8TDW7 4589 aa6.75□□□□□ -1.33
FUBP1-201ENST00000294623 A0A1B0GVY2 172 aa6.74□□□□□ -1.33
FUBP1-201ENST00000294623 R4GN34 69 aa6.74□□□□□ -1.33
FUBP1-201ENST00000294623 HSPG2P98160 4391 aa6.7□□□□□ -1.34
FUBP1-201ENST00000294623 FAT1Q14517 4588 aa6.68□□□□□ -1.34
FUBP1-201ENST00000294623 DYNC1H1Q14204 4646 aaKnown RBP6.68□□□□□ -1.34
FUBP1-201ENST00000294623 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
FUBP1-201ENST00000294623 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
FUBP1-201ENST00000294623 HYDINQ4G0P3 5121 aa6.62□□□□□ -1.35
FUBP1-201ENST00000294623 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
FUBP1-201ENST00000294623 MYCBP2O75592 4640 aa6.56□□□□□ -1.36
FUBP1-201ENST00000294623 PCLOQ9Y6V0 5065 aa6.54□□□□□ -1.36
FUBP1-201ENST00000294623 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
FUBP1-201ENST00000294623 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
FUBP1-201ENST00000294623 Q5VSD8 79 aa6.44□□□□□ -1.38
FUBP1-201ENST00000294623 RYR1P21817 5038 aa6.43□□□□□ -1.38
FUBP1-201ENST00000294623 HERC2O95714 4834 aa6.4□□□□□ -1.39
FUBP1-201ENST00000294623 RYR2Q92736 4967 aa6.39□□□□□ -1.39
FUBP1-201ENST00000294623 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
FUBP1-201ENST00000294623 TNP1P09430 55 aa6.37□□□□□ -1.39
FUBP1-201ENST00000294623 MT1HL1P0DM35 61 aa6.35□□□□□ -1.39
FUBP1-201ENST00000294623 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
FUBP1-201ENST00000294623 INE1O15225 51 aa6.29□□□□□ -1.4
FUBP1-201ENST00000294623 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
FUBP1-201ENST00000294623 LPAP08519 4548 aa6.06□□□□□ -1.44
FUBP1-201ENST00000294623 LRP2P98164 4655 aa6.05□□□□□ -1.44
FUBP1-201ENST00000294623 KRTAP19-2Q3LHN2 52 aa6.05□□□□□ -1.44
FUBP1-201ENST00000294623 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
FUBP1-201ENST00000294623 ABCA13Q86UQ4 5058 aa5.99□□□□□ -1.45
FUBP1-201ENST00000294623 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
FUBP1-201ENST00000294623 KRTAP4-1Q9BYQ7 146 aa5.95□□□□□ -1.46
FUBP1-201ENST00000294623 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
FUBP1-201ENST00000294623 HERC1Q15751 4861 aa5.92□□□□□ -1.46
FUBP1-201ENST00000294623 KRTAP8-1Q8IUC2 63 aa5.83□□□□□ -1.48
FUBP1-201ENST00000294623 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
FUBP1-201ENST00000294623 LCE3AQ5TA76 89 aa5.82□□□□□ -1.48
FUBP1-201ENST00000294623 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
FUBP1-201ENST00000294623 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
FUBP1-201ENST00000294623 KRTAP9-6A0A140TA67 174 aa5.63□□□□□ -1.51
FUBP1-201ENST00000294623 J3QL48 77 aa5.6□□□□□ -1.51
FUBP1-201ENST00000294623 KRTAP12-3P60328 96 aa5.59□□□□□ -1.52
FUBP1-201ENST00000294623 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
FUBP1-201ENST00000294623 KRTAP9-2Q9BYQ4 174 aa5.52□□□□□ -1.53
FUBP1-201ENST00000294623 KRTAP19-8Q3LI54 63 aa5.52□□□□□ -1.53
FUBP1-201ENST00000294623 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
FUBP1-201ENST00000294623 KRTAP10-10P60014 251 aa5.45□□□□□ -1.54
FUBP1-201ENST00000294623 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
FUBP1-201ENST00000294623 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
FUBP1-201ENST00000294623 MT1XP80297 61 aa5.38□□□□□ -1.55
FUBP1-201ENST00000294623 RNF213Q63HN8 5207 aa5.37□□□□□ -1.55
FUBP1-201ENST00000294623 MT2AP02795 61 aa5.33□□□□□ -1.56
FUBP1-201ENST00000294623 M0R2T5 61 aa5.31□□□□□ -1.56
FUBP1-201ENST00000294623 MT1FP04733 61 aa5.31□□□□□ -1.56
FUBP1-201ENST00000294623 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
FUBP1-201ENST00000294623 MT1BP07438 61 aa5.29□□□□□ -1.56
FUBP1-201ENST00000294623 FAT4Q6V0I7 4981 aa5.29□□□□□ -1.56
FUBP1-201ENST00000294623 MUC2Q02817 5179 aa5.28□□□□□ -1.56
FUBP1-201ENST00000294623 MT1HP80294 61 aa5.25□□□□□ -1.57
FUBP1-201ENST00000294623 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
FUBP1-201ENST00000294623 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
FUBP1-201ENST00000294623 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.57
FUBP1-201ENST00000294623 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.57
FUBP1-201ENST00000294623 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.57
FUBP1-201ENST00000294623 KRTAP10-7P60409 375 aaPredicted RBP5.19□□□□□ -1.58
FUBP1-201ENST00000294623 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
FUBP1-201ENST00000294623 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.59
FUBP1-201ENST00000294623 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
FUBP1-201ENST00000294623 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
FUBP1-201ENST00000294623 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
FUBP1-201ENST00000294623 LCE2DQ5TA82 110 aaPredicted RBP4.93□□□□□ -1.62
FUBP1-201ENST00000294623 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.63
FUBP1-201ENST00000294623 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
FUBP1-201ENST00000294623 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
FUBP1-201ENST00000294623 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
FUBP1-201ENST00000294623 MT1LQ93083 61 aa4.72□□□□□ -1.65
FUBP1-201ENST00000294623 MT1EP04732 61 aa4.66□□□□□ -1.66
FUBP1-201ENST00000294623 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms