RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 COX6B2Q6YFQ2 88 aa8.27□□□□□ -1.09
NCKIPSD-201ENST00000294129 LINC01554Q52M75 96 aa8.25□□□□□ -1.09
NCKIPSD-201ENST00000294129 CSAG1Q6PB30 78 aa8.25□□□□□ -1.09
NCKIPSD-201ENST00000294129 XP32Q5T750 250 aa8.25□□□□□ -1.09
NCKIPSD-201ENST00000294129 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
NCKIPSD-201ENST00000294129 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.1
NCKIPSD-201ENST00000294129 H0YAA0 97 aa8.2□□□□□ -1.1
NCKIPSD-201ENST00000294129 MT1HL1P0DM35 61 aa8.18□□□□□ -1.1
NCKIPSD-201ENST00000294129 A0A1B0GU33 70 aa8.17□□□□□ -1.1
NCKIPSD-201ENST00000294129 LPAP08519 4548 aa8.12□□□□□ -1.11
NCKIPSD-201ENST00000294129 H1FX-AS1Q4G0G2 97 aa8.12□□□□□ -1.11
NCKIPSD-201ENST00000294129 LRP2P98164 4655 aa8.1□□□□□ -1.11
NCKIPSD-201ENST00000294129 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
NCKIPSD-201ENST00000294129 KRTAP4-5Q9BYR2 181 aa8.04□□□□□ -1.12
NCKIPSD-201ENST00000294129 S4R3F8 94 aa8.04□□□□□ -1.12
NCKIPSD-201ENST00000294129 ABCA13Q86UQ4 5058 aa8.04□□□□□ -1.12
NCKIPSD-201ENST00000294129 A0A0D9SG42 100 aa7.96□□□□□ -1.14
NCKIPSD-201ENST00000294129 CRIPTQ9P021 101 aa7.96□□□□□ -1.14
NCKIPSD-201ENST00000294129 KRTAP25-1Q3LHN0 102 aa7.95□□□□□ -1.14
NCKIPSD-201ENST00000294129 KRTAP10-6P60371 365 aaPredicted RBP7.94□□□□□ -1.14
NCKIPSD-201ENST00000294129 H3BS24 57 aa7.93□□□□□ -1.14
NCKIPSD-201ENST00000294129 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
NCKIPSD-201ENST00000294129 KRTAP13-4Q3LI77 160 aa7.91□□□□□ -1.14
NCKIPSD-201ENST00000294129 P0C880 135 aa7.9□□□□□ -1.14
NCKIPSD-201ENST00000294129 K7ERS5 55 aa7.89□□□□□ -1.15
NCKIPSD-201ENST00000294129 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
NCKIPSD-201ENST00000294129 J3QL48 77 aa7.8□□□□□ -1.16
NCKIPSD-201ENST00000294129 ROMO1P60602 79 aa7.76□□□□□ -1.17
NCKIPSD-201ENST00000294129 HERC2O95714 4834 aa7.75□□□□□ -1.17
NCKIPSD-201ENST00000294129 SPINT4Q6UDR6 99 aa7.68□□□□□ -1.18
NCKIPSD-201ENST00000294129 SEC61BP60468 96 aaKnown RBP7.66□□□□□ -1.18
NCKIPSD-201ENST00000294129 KRTAP12-2P59991 146 aa7.64□□□□□ -1.19
NCKIPSD-201ENST00000294129 KRTAP4-1Q9BYQ7 146 aa7.64□□□□□ -1.19
NCKIPSD-201ENST00000294129 MUC2Q02817 5179 aa7.6□□□□□ -1.19
NCKIPSD-201ENST00000294129 C10orf95Q9H7T3 257 aa7.6□□□□□ -1.19
NCKIPSD-201ENST00000294129 MUC17Q685J3 4493 aa7.59□□□□□ -1.19
NCKIPSD-201ENST00000294129 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
NCKIPSD-201ENST00000294129 M0QZ58 72 aa7.54□□□□□ -1.2
NCKIPSD-201ENST00000294129 R4GN34 69 aa7.5□□□□□ -1.21
NCKIPSD-201ENST00000294129 BIRC6Q9NR09 4857 aa7.47□□□□□ -1.21
NCKIPSD-201ENST00000294129 HERC1Q15751 4861 aa7.46□□□□□ -1.22
NCKIPSD-201ENST00000294129 LORP23490 312 aaPredicted RBP7.46□□□□□ -1.22
NCKIPSD-201ENST00000294129 PCLOQ9Y6V0 5065 aa7.39□□□□□ -1.23
NCKIPSD-201ENST00000294129 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
NCKIPSD-201ENST00000294129 KRTAP15-1Q3LI76 137 aa7.28□□□□□ -1.24
NCKIPSD-201ENST00000294129 FLGP20930 4061 aaPredicted RBP7.25□□□□□ -1.25
NCKIPSD-201ENST00000294129 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
NCKIPSD-201ENST00000294129 HMCN2Q8NDA2 5059 aa7.23□□□□□ -1.25
NCKIPSD-201ENST00000294129 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
NCKIPSD-201ENST00000294129 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
NCKIPSD-201ENST00000294129 RNF213Q63HN8 5207 aa7.14□□□□□ -1.27
NCKIPSD-201ENST00000294129 UBR4Q5T4S7 5183 aa7.07□□□□□ -1.28
NCKIPSD-201ENST00000294129 M0R2T5 61 aa7.05□□□□□ -1.28
NCKIPSD-201ENST00000294129 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
NCKIPSD-201ENST00000294129 PLAC4Q8WY50 150 aa6.93□□□□□ -1.3
NCKIPSD-201ENST00000294129 MT1HP80294 61 aa6.87□□□□□ -1.31
NCKIPSD-201ENST00000294129 KRTAP10-10P60014 251 aa6.8□□□□□ -1.32
NCKIPSD-201ENST00000294129 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
NCKIPSD-201ENST00000294129 TNP1P09430 55 aa6.77□□□□□ -1.33
NCKIPSD-201ENST00000294129 MT1FP04733 61 aa6.75□□□□□ -1.33
NCKIPSD-201ENST00000294129 SPRR2GQ9BYE4 73 aa6.75□□□□□ -1.33
NCKIPSD-201ENST00000294129 MT2AP02795 61 aa6.73□□□□□ -1.33
NCKIPSD-201ENST00000294129 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
NCKIPSD-201ENST00000294129 A0A0A0MQY5 61 aa6.69□□□□□ -1.34
NCKIPSD-201ENST00000294129 KRTAP9-8Q9BYQ0 159 aa6.66□□□□□ -1.34
NCKIPSD-201ENST00000294129 LUZP6Q538Z0 58 aa6.65□□□□□ -1.35
NCKIPSD-201ENST00000294129 LCE3AQ5TA76 89 aa6.47□□□□□ -1.37
NCKIPSD-201ENST00000294129 MT1BP07438 61 aa6.45□□□□□ -1.38
NCKIPSD-201ENST00000294129 KRTAP19-8Q3LI54 63 aa6.44□□□□□ -1.38
NCKIPSD-201ENST00000294129 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
NCKIPSD-201ENST00000294129 KRTAP10-5P60370 271 aa6.38□□□□□ -1.39
NCKIPSD-201ENST00000294129 MT1XP80297 61 aa6.38□□□□□ -1.39
NCKIPSD-201ENST00000294129 KRTAP9-3Q9BYQ3 159 aa6.38□□□□□ -1.39
NCKIPSD-201ENST00000294129 USH2AO75445 5202 aa6.33□□□□□ -1.4
NCKIPSD-201ENST00000294129 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
NCKIPSD-201ENST00000294129 KRTAP10-7P60409 375 aaPredicted RBP6.25□□□□□ -1.41
NCKIPSD-201ENST00000294129 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
NCKIPSD-201ENST00000294129 LCE2BO14633 110 aa6.21□□□□□ -1.42
NCKIPSD-201ENST00000294129 KRTAP8-1Q8IUC2 63 aa6.18□□□□□ -1.42
NCKIPSD-201ENST00000294129 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.42
NCKIPSD-201ENST00000294129 KMT2DO14686 5537 aa6.15□□□□□ -1.42
NCKIPSD-201ENST00000294129 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
NCKIPSD-201ENST00000294129 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
NCKIPSD-201ENST00000294129 KRTAP4-8A0A0G2JLE6 195 aa5.96□□□□□ -1.46
NCKIPSD-201ENST00000294129 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
NCKIPSD-201ENST00000294129 KRTAP4-8Q9BYQ9 185 aa5.96□□□□□ -1.46
NCKIPSD-201ENST00000294129 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
NCKIPSD-201ENST00000294129 SSPOA2VEC9 5147 aa5.77□□□□□ -1.49
NCKIPSD-201ENST00000294129 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
NCKIPSD-201ENST00000294129 INE1O15225 51 aa5.68□□□□□ -1.5
NCKIPSD-201ENST00000294129 KRTAP19-7Q3SYF9 63 aa5.68□□□□□ -1.5
NCKIPSD-201ENST00000294129 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
NCKIPSD-201ENST00000294129 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
NCKIPSD-201ENST00000294129 MT1EP04732 61 aa5.52□□□□□ -1.53
NCKIPSD-201ENST00000294129 KRTAP19-6Q3LI70 58 aa5.51□□□□□ -1.53
NCKIPSD-201ENST00000294129 MT1LQ93083 61 aa5.5□□□□□ -1.53
NCKIPSD-201ENST00000294129 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
NCKIPSD-201ENST00000294129 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.53
NCKIPSD-201ENST00000294129 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
NCKIPSD-201ENST00000294129 DSTQ03001 7570 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms