RNA–Protein interactions for RNA: ENST00000293925.9

CRAMP1-201, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-201ENST00000293925 ANK3Q12955 4377 aaKnown RBP6.49□□□□□ -1.37
CRAMP1-201ENST00000293925 AKAP9Q99996 3911 aa6.4□□□□□ -1.38
CRAMP1-201ENST00000293925 KRTAP10-4P60372 401 aaPredicted RBP6.4□□□□□ -1.39
CRAMP1-201ENST00000293925 HUWE1Q7Z6Z7 4374 aaKnown RBP6.37□□□□□ -1.39
CRAMP1-201ENST00000293925 ZNF469Q96JG9 3925 aaPredicted RBP6.33□□□□□ -1.4
CRAMP1-201ENST00000293925 KRTAP10-7P60409 375 aaPredicted RBP6.28□□□□□ -1.4
CRAMP1-201ENST00000293925 ALMS1Q8TCU4 4167 aa6.2□□□□□ -1.42
CRAMP1-201ENST00000293925 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
CRAMP1-201ENST00000293925 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
CRAMP1-201ENST00000293925 SPRR2FQ96RM1 72 aa6.16□□□□□ -1.42
CRAMP1-201ENST00000293925 DNAH2Q9P225 4427 aa6.11□□□□□ -1.43
CRAMP1-201ENST00000293925 MT1HP80294 61 aa6.07□□□□□ -1.44
CRAMP1-201ENST00000293925 SPRR2GQ9BYE4 73 aa6.05□□□□□ -1.44
CRAMP1-201ENST00000293925 KRTAP4-1Q9BYQ7 146 aa6.04□□□□□ -1.44
CRAMP1-201ENST00000293925 MT2AP02795 61 aa5.99□□□□□ -1.45
CRAMP1-201ENST00000293925 DNAH1Q9P2D7 4330 aa5.98□□□□□ -1.45
CRAMP1-201ENST00000293925 LCE3BQ5TA77 95 aa5.96□□□□□ -1.46
CRAMP1-201ENST00000293925 LYSTQ99698 3801 aa5.95□□□□□ -1.46
CRAMP1-201ENST00000293925 VPS13BQ7Z7G8 4022 aa5.9□□□□□ -1.46
CRAMP1-201ENST00000293925 FRAS1Q86XX4 4008 aa5.9□□□□□ -1.47
CRAMP1-201ENST00000293925 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
CRAMP1-201ENST00000293925 MT1FP04733 61 aa5.87□□□□□ -1.47
CRAMP1-201ENST00000293925 KMT2AQ03164 3969 aa5.86□□□□□ -1.47
CRAMP1-201ENST00000293925 ANK2Q01484 3957 aa5.84□□□□□ -1.47
CRAMP1-201ENST00000293925 DNAH8Q96JB1 4490 aa5.83□□□□□ -1.48
CRAMP1-201ENST00000293925 DNAH10Q8IVF4 4471 aa5.8□□□□□ -1.48
CRAMP1-201ENST00000293925 DNAH3Q8TD57 4116 aa5.77□□□□□ -1.49
CRAMP1-201ENST00000293925 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
CRAMP1-201ENST00000293925 DNAH9Q9NYC9 4486 aa5.76□□□□□ -1.49
CRAMP1-201ENST00000293925 SPRR2EP22531 72 aa5.75□□□□□ -1.49
CRAMP1-201ENST00000293925 SPRR2BP35325 72 aa5.75□□□□□ -1.49
CRAMP1-201ENST00000293925 SPRR2AP35326 72 aa5.75□□□□□ -1.49
CRAMP1-201ENST00000293925 MT1GP13640 62 aa5.7□□□□□ -1.5
CRAMP1-201ENST00000293925 DNAH17Q9UFH2 4485 aa5.67□□□□□ -1.5
CRAMP1-201ENST00000293925 DNAH7Q8WXX0 4024 aa5.67□□□□□ -1.5
CRAMP1-201ENST00000293925 FAT1Q14517 4588 aa5.64□□□□□ -1.51
CRAMP1-201ENST00000293925 DNAH5Q8TE73 4624 aa5.61□□□□□ -1.51
CRAMP1-201ENST00000293925 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
CRAMP1-201ENST00000293925 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
CRAMP1-201ENST00000293925 LCE3DQ9BYE3 92 aa5.59□□□□□ -1.51
CRAMP1-201ENST00000293925 CMYA5Q8N3K9 4069 aa5.58□□□□□ -1.52
CRAMP1-201ENST00000293925 SPRR2DP22532 72 aa5.55□□□□□ -1.52
CRAMP1-201ENST00000293925 LCE2BO14633 110 aa5.54□□□□□ -1.52
CRAMP1-201ENST00000293925 HECTD4Q9Y4D8 3996 aa5.49□□□□□ -1.53
CRAMP1-201ENST00000293925 DNAH6Q9C0G6 4158 aa5.49□□□□□ -1.53
CRAMP1-201ENST00000293925 LCE3EQ5T5B0 92 aa5.47□□□□□ -1.53
CRAMP1-201ENST00000293925 PRKDCP78527 4128 aaKnown RBP5.45□□□□□ -1.54
CRAMP1-201ENST00000293925 PLECQ15149 4684 aaKnown RBP5.45□□□□□ -1.54
CRAMP1-201ENST00000293925 MT1XP80297 61 aa5.45□□□□□ -1.54
CRAMP1-201ENST00000293925 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
CRAMP1-201ENST00000293925 KRTAP19-8Q3LI54 63 aa5.43□□□□□ -1.54
CRAMP1-201ENST00000293925 DYNC2H1Q8NCM8 4307 aaKnown RBP5.41□□□□□ -1.54
CRAMP1-201ENST00000293925 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
CRAMP1-201ENST00000293925 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
CRAMP1-201ENST00000293925 VPS13DQ5THJ4 4388 aa5.35□□□□□ -1.55
CRAMP1-201ENST00000293925 LRP1BQ9NZR2 4599 aa5.33□□□□□ -1.56
CRAMP1-201ENST00000293925 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
CRAMP1-201ENST00000293925 APOBP04114 4563 aaKnown RBP5.32□□□□□ -1.56
CRAMP1-201ENST00000293925 STARD9Q9P2P6 4700 aa5.3□□□□□ -1.56
CRAMP1-201ENST00000293925 MT1BP07438 61 aa5.23□□□□□ -1.57
CRAMP1-201ENST00000293925 PRM1P04553 51 aa5.22□□□□□ -1.57
CRAMP1-201ENST00000293925 LRP1Q07954 4544 aaKnown RBP5.22□□□□□ -1.57
CRAMP1-201ENST00000293925 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
CRAMP1-201ENST00000293925 SACSQ9NZJ4 4579 aa5.2□□□□□ -1.58
CRAMP1-201ENST00000293925 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
CRAMP1-201ENST00000293925 FLGP20930 4061 aaPredicted RBP5.15□□□□□ -1.59
CRAMP1-201ENST00000293925 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
CRAMP1-201ENST00000293925 FAT3Q8TDW7 4589 aa5.13□□□□□ -1.59
CRAMP1-201ENST00000293925 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
CRAMP1-201ENST00000293925 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
CRAMP1-201ENST00000293925 MT1LQ93083 61 aa5.08□□□□□ -1.6
CRAMP1-201ENST00000293925 KRTAP17-1Q9BYP8 105 aa5.08□□□□□ -1.6
CRAMP1-201ENST00000293925 DNHD1Q96M86 4753 aa5.05□□□□□ -1.6
CRAMP1-201ENST00000293925 DYNC1H1Q14204 4646 aaKnown RBP5.05□□□□□ -1.6
CRAMP1-201ENST00000293925 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
CRAMP1-201ENST00000293925 PKHD1P08F94 4074 aa5.03□□□□□ -1.6
CRAMP1-201ENST00000293925 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
CRAMP1-201ENST00000293925 MT4P47944 62 aa5.02□□□□□ -1.61
CRAMP1-201ENST00000293925 MT3P25713 68 aa4.99□□□□□ -1.61
CRAMP1-201ENST00000293925 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
CRAMP1-201ENST00000293925 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
CRAMP1-201ENST00000293925 PKD1P98161 4303 aa4.95□□□□□ -1.62
CRAMP1-201ENST00000293925 MT1EP04732 61 aa4.93□□□□□ -1.62
CRAMP1-201ENST00000293925 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
CRAMP1-201ENST00000293925 RYR1P21817 5038 aa4.89□□□□□ -1.63
CRAMP1-201ENST00000293925 PKHD1L1Q86WI1 4243 aa4.89□□□□□ -1.63
CRAMP1-201ENST00000293925 HSPG2P98160 4391 aa4.82□□□□□ -1.64
CRAMP1-201ENST00000293925 MT1MQ8N339 61 aa4.82□□□□□ -1.64
CRAMP1-201ENST00000293925 LPAP08519 4548 aa4.78□□□□□ -1.64
CRAMP1-201ENST00000293925 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
CRAMP1-201ENST00000293925 KRTAP9-2Q9BYQ4 174 aa4.76□□□□□ -1.65
CRAMP1-201ENST00000293925 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
CRAMP1-201ENST00000293925 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
CRAMP1-201ENST00000293925 RYR3Q15413 4870 aa4.61□□□□□ -1.67
CRAMP1-201ENST00000293925 TNXBP22105 4242 aa4.6□□□□□ -1.67
CRAMP1-201ENST00000293925 LRP2P98164 4655 aa4.59□□□□□ -1.68
CRAMP1-201ENST00000293925 KRTAP9-6A0A140TA67 174 aa4.56□□□□□ -1.68
CRAMP1-201ENST00000293925 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
CRAMP1-201ENST00000293925 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
CRAMP1-201ENST00000293925 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms