RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 PLECQ15149 4684 aaKnown RBP7.71□□□□□ -1.18
PCDHA13-201ENST00000289272 KRTAP4-5Q9BYR2 181 aa7.7□□□□□ -1.18
PCDHA13-201ENST00000289272 DNAH5Q8TE73 4624 aa7.66□□□□□ -1.18
PCDHA13-201ENST00000289272 VPS13DQ5THJ4 4388 aa7.62□□□□□ -1.19
PCDHA13-201ENST00000289272 DNAH17Q9UFH2 4485 aa7.61□□□□□ -1.19
PCDHA13-201ENST00000289272 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
PCDHA13-201ENST00000289272 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
PCDHA13-201ENST00000289272 DNAH10Q8IVF4 4471 aa7.57□□□□□ -1.2
PCDHA13-201ENST00000289272 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
PCDHA13-201ENST00000289272 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
PCDHA13-201ENST00000289272 STARD9Q9P2P6 4700 aa7.41□□□□□ -1.22
PCDHA13-201ENST00000289272 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
PCDHA13-201ENST00000289272 LCE3AQ5TA76 89 aa7.4□□□□□ -1.23
PCDHA13-201ENST00000289272 DNAH2Q9P225 4427 aa7.39□□□□□ -1.23
PCDHA13-201ENST00000289272 DYNC1H1Q14204 4646 aaKnown RBP7.35□□□□□ -1.23
PCDHA13-201ENST00000289272 DNHD1Q96M86 4753 aa7.34□□□□□ -1.23
PCDHA13-201ENST00000289272 DNAH8Q96JB1 4490 aa7.33□□□□□ -1.24
PCDHA13-201ENST00000289272 LRP1BQ9NZR2 4599 aa7.3□□□□□ -1.24
PCDHA13-201ENST00000289272 CRCT1Q9UGL9 99 aa7.29□□□□□ -1.24
PCDHA13-201ENST00000289272 DYNC2H1Q8NCM8 4307 aaKnown RBP7.29□□□□□ -1.24
PCDHA13-201ENST00000289272 KRTAP4-1Q9BYQ7 146 aa7.24□□□□□ -1.25
PCDHA13-201ENST00000289272 FAT1Q14517 4588 aa7.24□□□□□ -1.25
PCDHA13-201ENST00000289272 SACSQ9NZJ4 4579 aa7.24□□□□□ -1.25
PCDHA13-201ENST00000289272 ANK2Q01484 3957 aa7.19□□□□□ -1.26
PCDHA13-201ENST00000289272 PRKDCP78527 4128 aaKnown RBP7.18□□□□□ -1.26
PCDHA13-201ENST00000289272 FAT2Q9NYQ8 4349 aa7.17□□□□□ -1.26
PCDHA13-201ENST00000289272 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
PCDHA13-201ENST00000289272 MT1HP80294 61 aa7.03□□□□□ -1.28
PCDHA13-201ENST00000289272 VPS13BQ7Z7G8 4022 aa7.02□□□□□ -1.28
PCDHA13-201ENST00000289272 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
PCDHA13-201ENST00000289272 RYR1P21817 5038 aa7.01□□□□□ -1.29
PCDHA13-201ENST00000289272 CMYA5Q8N3K9 4069 aa7□□□□□ -1.29
PCDHA13-201ENST00000289272 KRTAP8-1Q8IUC2 63 aa6.98□□□□□ -1.29
PCDHA13-201ENST00000289272 APOBP04114 4563 aaKnown RBP6.97□□□□□ -1.29
PCDHA13-201ENST00000289272 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
PCDHA13-201ENST00000289272 SPRR2GQ9BYE4 73 aa6.96□□□□□ -1.29
PCDHA13-201ENST00000289272 MT2AP02795 61 aa6.92□□□□□ -1.3
PCDHA13-201ENST00000289272 HECTD4Q9Y4D8 3996 aa6.88□□□□□ -1.31
PCDHA13-201ENST00000289272 LYSTQ99698 3801 aa6.86□□□□□ -1.31
PCDHA13-201ENST00000289272 FRAS1Q86XX4 4008 aa6.85□□□□□ -1.31
PCDHA13-201ENST00000289272 DNAH7Q8WXX0 4024 aa6.84□□□□□ -1.31
PCDHA13-201ENST00000289272 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
PCDHA13-201ENST00000289272 KRTAP10-5P60370 271 aa6.8□□□□□ -1.32
PCDHA13-201ENST00000289272 KRTAP17-1Q9BYP8 105 aa6.8□□□□□ -1.32
PCDHA13-201ENST00000289272 MT1FP04733 61 aa6.78□□□□□ -1.32
PCDHA13-201ENST00000289272 MYCBP2O75592 4640 aa6.77□□□□□ -1.33
PCDHA13-201ENST00000289272 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
PCDHA13-201ENST00000289272 RYR3Q15413 4870 aa6.73□□□□□ -1.33
PCDHA13-201ENST00000289272 LCE3CQ5T5A8 94 aa6.7□□□□□ -1.34
PCDHA13-201ENST00000289272 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
PCDHA13-201ENST00000289272 RYR2Q92736 4967 aa6.69□□□□□ -1.34
PCDHA13-201ENST00000289272 LRP1Q07954 4544 aaKnown RBP6.68□□□□□ -1.34
PCDHA13-201ENST00000289272 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
PCDHA13-201ENST00000289272 HYDINQ4G0P3 5121 aa6.54□□□□□ -1.36
PCDHA13-201ENST00000289272 KRTAP19-8Q3LI54 63 aa6.53□□□□□ -1.36
PCDHA13-201ENST00000289272 KRTAP19-5Q3LI72 72 aa6.51□□□□□ -1.37
PCDHA13-201ENST00000289272 SPRR2FQ96RM1 72 aa6.45□□□□□ -1.38
PCDHA13-201ENST00000289272 KRTAP10-7P60409 375 aaPredicted RBP6.44□□□□□ -1.38
PCDHA13-201ENST00000289272 HSPG2P98160 4391 aa6.42□□□□□ -1.38
PCDHA13-201ENST00000289272 PKHD1P08F94 4074 aa6.41□□□□□ -1.38
PCDHA13-201ENST00000289272 HERC1Q15751 4861 aa6.4□□□□□ -1.38
PCDHA13-201ENST00000289272 PKD1P98161 4303 aa6.38□□□□□ -1.39
PCDHA13-201ENST00000289272 LRP2P98164 4655 aa6.37□□□□□ -1.39
PCDHA13-201ENST00000289272 MT1XP80297 61 aa6.33□□□□□ -1.4
PCDHA13-201ENST00000289272 HERC2O95714 4834 aa6.31□□□□□ -1.4
PCDHA13-201ENST00000289272 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
PCDHA13-201ENST00000289272 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
PCDHA13-201ENST00000289272 MT1BP07438 61 aa6.3□□□□□ -1.4
PCDHA13-201ENST00000289272 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
PCDHA13-201ENST00000289272 KRTAP19-2Q3LHN2 52 aa6.17□□□□□ -1.42
PCDHA13-201ENST00000289272 TNXBP22105 4242 aa6.16□□□□□ -1.42
PCDHA13-201ENST00000289272 BIRC6Q9NR09 4857 aa6.16□□□□□ -1.42
PCDHA13-201ENST00000289272 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
PCDHA13-201ENST00000289272 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
PCDHA13-201ENST00000289272 LPAP08519 4548 aa6.12□□□□□ -1.43
PCDHA13-201ENST00000289272 SPRR2EP22531 72 aa6.09□□□□□ -1.43
PCDHA13-201ENST00000289272 SPRR2BP35325 72 aa6.09□□□□□ -1.43
PCDHA13-201ENST00000289272 SPRR2AP35326 72 aa6.09□□□□□ -1.43
PCDHA13-201ENST00000289272 KRTAP12-4P60329 112 aa6.08□□□□□ -1.44
PCDHA13-201ENST00000289272 PCLOQ9Y6V0 5065 aa6□□□□□ -1.45
PCDHA13-201ENST00000289272 MUC17Q685J3 4493 aa6□□□□□ -1.45
PCDHA13-201ENST00000289272 MT1GP13640 62 aa5.99□□□□□ -1.45
PCDHA13-201ENST00000289272 KRTAP4-8A0A0G2JLE6 195 aa5.97□□□□□ -1.45
PCDHA13-201ENST00000289272 KRTAP4-8Q9BYQ9 185 aa5.97□□□□□ -1.45
PCDHA13-201ENST00000289272 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
PCDHA13-201ENST00000289272 LCE2BO14633 110 aa5.93□□□□□ -1.46
PCDHA13-201ENST00000289272 SPRR2DP22532 72 aa5.92□□□□□ -1.46
PCDHA13-201ENST00000289272 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
PCDHA13-201ENST00000289272 ABCA13Q86UQ4 5058 aa5.8□□□□□ -1.48
PCDHA13-201ENST00000289272 LCE3DQ9BYE3 92 aa5.79□□□□□ -1.48
PCDHA13-201ENST00000289272 LCE3EQ5T5B0 92 aa5.79□□□□□ -1.48
PCDHA13-201ENST00000289272 EPPK1P58107 5090 aaKnown RBP5.77□□□□□ -1.49
PCDHA13-201ENST00000289272 MT1LQ93083 61 aa5.76□□□□□ -1.49
PCDHA13-201ENST00000289272 KRTAP19-3Q7Z4W3 81 aa5.73□□□□□ -1.49
PCDHA13-201ENST00000289272 MT1EP04732 61 aa5.66□□□□□ -1.5
PCDHA13-201ENST00000289272 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
PCDHA13-201ENST00000289272 KRTAP4-7Q9BYR0 210 aa5.64□□□□□ -1.51
PCDHA13-201ENST00000289272 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
PCDHA13-201ENST00000289272 FAT4Q6V0I7 4981 aa5.53□□□□□ -1.52
PCDHA13-201ENST00000289272 KRTAP2-3P0C7H8 128 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms