RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 S4R3F8 94 aa5.1□□□□□ -1.59
HMBOX1-201ENST00000287701 XP32Q5T750 250 aa5.09□□□□□ -1.59
HMBOX1-201ENST00000287701 KMT2AQ03164 3969 aa5.08□□□□□ -1.6
HMBOX1-201ENST00000287701 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
HMBOX1-201ENST00000287701 A0A0D9SG42 100 aa5.06□□□□□ -1.6
HMBOX1-201ENST00000287701 DYNC1H1Q14204 4646 aaKnown RBP5.05□□□□□ -1.6
HMBOX1-201ENST00000287701 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
HMBOX1-201ENST00000287701 DMBT1Q9UGM3 2413 aaPredicted RBP5.02□□□□□ -1.61
HMBOX1-201ENST00000287701 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
HMBOX1-201ENST00000287701 FAT2Q9NYQ8 4349 aa5.01□□□□□ -1.61
HMBOX1-201ENST00000287701 DNAH5Q8TE73 4624 aa5.01□□□□□ -1.61
HMBOX1-201ENST00000287701 KRTAP12-1P59990 96 aa4.99□□□□□ -1.61
HMBOX1-201ENST00000287701 C9orf92A6NGG3 77 aa4.99□□□□□ -1.61
HMBOX1-201ENST00000287701 KRTAP10-2P60368 255 aa4.98□□□□□ -1.61
HMBOX1-201ENST00000287701 PKD1P98161 4303 aa4.98□□□□□ -1.61
HMBOX1-201ENST00000287701 LRP1BQ9NZR2 4599 aa4.95□□□□□ -1.62
HMBOX1-201ENST00000287701 KRTAP10-1P60331 282 aa4.95□□□□□ -1.62
HMBOX1-201ENST00000287701 A0A1B0GVY2 172 aa4.92□□□□□ -1.62
HMBOX1-201ENST00000287701 RYR1P21817 5038 aa4.91□□□□□ -1.62
HMBOX1-201ENST00000287701 M0QZ58 72 aa4.9□□□□□ -1.62
HMBOX1-201ENST00000287701 KIAA1109Q2LD37 5005 aa4.9□□□□□ -1.62
HMBOX1-201ENST00000287701 PKHD1L1Q86WI1 4243 aa4.9□□□□□ -1.62
HMBOX1-201ENST00000287701 PLAC4Q8WY50 150 aa4.9□□□□□ -1.63
HMBOX1-201ENST00000287701 ABCA13Q86UQ4 5058 aa4.89□□□□□ -1.63
HMBOX1-201ENST00000287701 VPS13BQ7Z7G8 4022 aa4.89□□□□□ -1.63
HMBOX1-201ENST00000287701 HSPG2P98160 4391 aa4.88□□□□□ -1.63
HMBOX1-201ENST00000287701 PKHD1P08F94 4074 aa4.88□□□□□ -1.63
HMBOX1-201ENST00000287701 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
HMBOX1-201ENST00000287701 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
HMBOX1-201ENST00000287701 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
HMBOX1-201ENST00000287701 APOBP04114 4563 aaKnown RBP4.81□□□□□ -1.64
HMBOX1-201ENST00000287701 KRTAP10-8P60410 259 aa4.76□□□□□ -1.65
HMBOX1-201ENST00000287701 KRTAP4-5Q9BYR2 181 aa4.75□□□□□ -1.65
HMBOX1-201ENST00000287701 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
HMBOX1-201ENST00000287701 MYCBP2O75592 4640 aa4.71□□□□□ -1.66
HMBOX1-201ENST00000287701 LRP1Q07954 4544 aaKnown RBP4.71□□□□□ -1.66
HMBOX1-201ENST00000287701 KRTAP10-4P60372 401 aaPredicted RBP4.69□□□□□ -1.66
HMBOX1-201ENST00000287701 TNXBP22105 4242 aa4.67□□□□□ -1.66
HMBOX1-201ENST00000287701 HERC1Q15751 4861 aa4.65□□□□□ -1.66
HMBOX1-201ENST00000287701 CAMK2N1Q7Z7J9 78 aa4.63□□□□□ -1.67
HMBOX1-201ENST00000287701 FAT3Q8TDW7 4589 aa4.63□□□□□ -1.67
HMBOX1-201ENST00000287701 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
HMBOX1-201ENST00000287701 R4GN34 69 aa4.57□□□□□ -1.68
HMBOX1-201ENST00000287701 SMR3BP02814 79 aaPredicted RBP4.56□□□□□ -1.68
HMBOX1-201ENST00000287701 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
HMBOX1-201ENST00000287701 FAT1Q14517 4588 aa4.55□□□□□ -1.68
HMBOX1-201ENST00000287701 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
HMBOX1-201ENST00000287701 PRO2289Q9P1D8 64 aa4.55□□□□□ -1.68
HMBOX1-201ENST00000287701 Q5VSD8 79 aa4.51□□□□□ -1.69
HMBOX1-201ENST00000287701 INE1O15225 51 aa4.44□□□□□ -1.7
HMBOX1-201ENST00000287701 J3QL48 77 aa4.4□□□□□ -1.7
HMBOX1-201ENST00000287701 LPAP08519 4548 aa4.39□□□□□ -1.71
HMBOX1-201ENST00000287701 LORP23490 312 aaPredicted RBP4.38□□□□□ -1.71
HMBOX1-201ENST00000287701 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
HMBOX1-201ENST00000287701 TNP1P09430 55 aa4.34□□□□□ -1.71
HMBOX1-201ENST00000287701 MT1HL1P0DM35 61 aa4.31□□□□□ -1.72
HMBOX1-201ENST00000287701 RNF213Q63HN8 5207 aa4.31□□□□□ -1.72
HMBOX1-201ENST00000287701 LCE2BO14633 110 aa4.3□□□□□ -1.72
HMBOX1-201ENST00000287701 LCE2AQ5TA79 106 aaPredicted RBP4.25□□□□□ -1.73
HMBOX1-201ENST00000287701 LRP2P98164 4655 aa4.18□□□□□ -1.74
HMBOX1-201ENST00000287701 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
HMBOX1-201ENST00000287701 MUC17Q685J3 4493 aa4.17□□□□□ -1.74
HMBOX1-201ENST00000287701 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.74
HMBOX1-201ENST00000287701 FAT4Q6V0I7 4981 aa4.14□□□□□ -1.75
HMBOX1-201ENST00000287701 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
HMBOX1-201ENST00000287701 KRTAP19-2Q3LHN2 52 aa4.11□□□□□ -1.75
HMBOX1-201ENST00000287701 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
HMBOX1-201ENST00000287701 MUC2Q02817 5179 aa4.07□□□□□ -1.76
HMBOX1-201ENST00000287701 KRTAP4-1Q9BYQ7 146 aa4.02□□□□□ -1.77
HMBOX1-201ENST00000287701 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
HMBOX1-201ENST00000287701 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
HMBOX1-201ENST00000287701 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
HMBOX1-201ENST00000287701 LCE2CQ5TA81 110 aa3.98□□□□□ -1.77
HMBOX1-201ENST00000287701 KRTAP4-8A0A0G2JLE6 195 aa3.95□□□□□ -1.78
HMBOX1-201ENST00000287701 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
HMBOX1-201ENST00000287701 KRTAP10-12P60413 245 aa3.89□□□□□ -1.79
HMBOX1-201ENST00000287701 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
HMBOX1-201ENST00000287701 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
HMBOX1-201ENST00000287701 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
HMBOX1-201ENST00000287701 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
HMBOX1-201ENST00000287701 KRTAP19-1Q8IUB9 90 aa3.84□□□□□ -1.8
HMBOX1-201ENST00000287701 KRTAP12-3P60328 96 aa3.82□□□□□ -1.8
HMBOX1-201ENST00000287701 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
HMBOX1-201ENST00000287701 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
HMBOX1-201ENST00000287701 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
HMBOX1-201ENST00000287701 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
HMBOX1-201ENST00000287701 KRTAP19-8Q3LI54 63 aa3.7□□□□□ -1.82
HMBOX1-201ENST00000287701 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
HMBOX1-201ENST00000287701 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
HMBOX1-201ENST00000287701 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
HMBOX1-201ENST00000287701 MT1HP80294 61 aa3.67□□□□□ -1.82
HMBOX1-201ENST00000287701 MT1XP80297 61 aa3.65□□□□□ -1.82
HMBOX1-201ENST00000287701 KRTAP2-3P0C7H8 128 aa3.65□□□□□ -1.83
HMBOX1-201ENST00000287701 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
HMBOX1-201ENST00000287701 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
HMBOX1-201ENST00000287701 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
HMBOX1-201ENST00000287701 KRTAP2-4Q9BYR9 128 aa3.65□□□□□ -1.83
HMBOX1-201ENST00000287701 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
HMBOX1-201ENST00000287701 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
HMBOX1-201ENST00000287701 MT1BP07438 61 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms