RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
VPS8-201ENST00000287546 ALMS1Q8TCU4 4167 aa3.9□□□□□ -1.79
VPS8-201ENST00000287546 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
VPS8-201ENST00000287546 DNAH5Q8TE73 4624 aa3.89□□□□□ -1.79
VPS8-201ENST00000287546 Q5VV11 94 aa3.89□□□□□ -1.79
VPS8-201ENST00000287546 Q75L30 129 aa3.88□□□□□ -1.79
VPS8-201ENST00000287546 A0A1B0GVY2 172 aa3.87□□□□□ -1.79
VPS8-201ENST00000287546 SPATA8Q6RVD6 105 aa3.87□□□□□ -1.79
VPS8-201ENST00000287546 KIAA1109Q2LD37 5005 aa3.86□□□□□ -1.79
VPS8-201ENST00000287546 ROMO1P60602 79 aa3.85□□□□□ -1.79
VPS8-201ENST00000287546 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
VPS8-201ENST00000287546 FAT1Q14517 4588 aa3.84□□□□□ -1.79
VPS8-201ENST00000287546 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
VPS8-201ENST00000287546 DYNC1H1Q14204 4646 aaKnown RBP3.83□□□□□ -1.8
VPS8-201ENST00000287546 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
VPS8-201ENST00000287546 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
VPS8-201ENST00000287546 A6NN06 94 aa3.8□□□□□ -1.8
VPS8-201ENST00000287546 KRTAP13-3Q3SY46 172 aa3.78□□□□□ -1.8
VPS8-201ENST00000287546 APOBP04114 4563 aaKnown RBP3.76□□□□□ -1.81
VPS8-201ENST00000287546 MYCBP2O75592 4640 aa3.71□□□□□ -1.82
VPS8-201ENST00000287546 KRTAP4-5Q9BYR2 181 aa3.71□□□□□ -1.82
VPS8-201ENST00000287546 KRTAP17-1Q9BYP8 105 aa3.7□□□□□ -1.82
VPS8-201ENST00000287546 RYR1P21817 5038 aa3.7□□□□□ -1.82
VPS8-201ENST00000287546 TPRXLQ17RH7 258 aa3.69□□□□□ -1.82
VPS8-201ENST00000287546 LRP1Q07954 4544 aaKnown RBP3.68□□□□□ -1.82
VPS8-201ENST00000287546 HSPG2P98160 4391 aa3.68□□□□□ -1.82
VPS8-201ENST00000287546 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
VPS8-201ENST00000287546 KRTAP10-4P60372 401 aaPredicted RBP3.67□□□□□ -1.82
VPS8-201ENST00000287546 XP32Q5T750 250 aa3.66□□□□□ -1.82
VPS8-201ENST00000287546 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
VPS8-201ENST00000287546 BIRC6Q9NR09 4857 aa3.63□□□□□ -1.83
VPS8-201ENST00000287546 HERC2O95714 4834 aa3.63□□□□□ -1.83
VPS8-201ENST00000287546 TNXBP22105 4242 aa3.61□□□□□ -1.83
VPS8-201ENST00000287546 ABCA13Q86UQ4 5058 aa3.61□□□□□ -1.83
VPS8-201ENST00000287546 PCLOQ9Y6V0 5065 aa3.57□□□□□ -1.84
VPS8-201ENST00000287546 NDUFAF8A1L188 74 aa3.56□□□□□ -1.84
VPS8-201ENST00000287546 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
VPS8-201ENST00000287546 KRTAP25-1Q3LHN0 102 aa3.52□□□□□ -1.85
VPS8-201ENST00000287546 HERC1Q15751 4861 aa3.51□□□□□ -1.85
VPS8-201ENST00000287546 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
VPS8-201ENST00000287546 H0YAA0 97 aa3.46□□□□□ -1.85
VPS8-201ENST00000287546 LRP2P98164 4655 aa3.45□□□□□ -1.86
VPS8-201ENST00000287546 LPAP08519 4548 aa3.41□□□□□ -1.86
VPS8-201ENST00000287546 MUC2Q02817 5179 aa3.35□□□□□ -1.87
VPS8-201ENST00000287546 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
VPS8-201ENST00000287546 KRTAP3-3Q9BYR6 98 aa3.35□□□□□ -1.87
VPS8-201ENST00000287546 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
VPS8-201ENST00000287546 CRCT1Q9UGL9 99 aa3.34□□□□□ -1.88
VPS8-201ENST00000287546 UBR4Q5T4S7 5183 aa3.33□□□□□ -1.88
VPS8-201ENST00000287546 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
VPS8-201ENST00000287546 KRTAP3-2Q9BYR7 98 aa3.3□□□□□ -1.88
VPS8-201ENST00000287546 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
VPS8-201ENST00000287546 LORP23490 312 aaPredicted RBP3.27□□□□□ -1.89
VPS8-201ENST00000287546 MUC17Q685J3 4493 aa3.27□□□□□ -1.89
VPS8-201ENST00000287546 KRTAP13-4Q3LI77 160 aa3.26□□□□□ -1.89
VPS8-201ENST00000287546 KRTAP12-2P59991 146 aa3.25□□□□□ -1.89
VPS8-201ENST00000287546 KRTAP12-1P59990 96 aa3.25□□□□□ -1.89
VPS8-201ENST00000287546 KRTAP4-1Q9BYQ7 146 aa3.22□□□□□ -1.89
VPS8-201ENST00000287546 FLGP20930 4061 aaPredicted RBP3.21□□□□□ -1.9
VPS8-201ENST00000287546 FAT4Q6V0I7 4981 aa3.21□□□□□ -1.9
VPS8-201ENST00000287546 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
VPS8-201ENST00000287546 KRTAP10-7P60409 375 aaPredicted RBP3.11□□□□□ -1.91
VPS8-201ENST00000287546 KRTAP10-12P60413 245 aa3.1□□□□□ -1.91
VPS8-201ENST00000287546 KRTAP19-2Q3LHN2 52 aa3.02□□□□□ -1.93
VPS8-201ENST00000287546 LCE2CQ5TA81 110 aa3.01□□□□□ -1.93
VPS8-201ENST00000287546 KRTAP23-1A1A580 65 aa3□□□□□ -1.93
VPS8-201ENST00000287546 MT1HP80294 61 aa3□□□□□ -1.93
VPS8-201ENST00000287546 FSIP2Q5CZC0 6907 aa2.99□□□□□ -1.93
VPS8-201ENST00000287546 SPRR2GQ9BYE4 73 aa2.97□□□□□ -1.93
VPS8-201ENST00000287546 KRTAP10-5P60370 271 aa2.96□□□□□ -1.94
VPS8-201ENST00000287546 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
VPS8-201ENST00000287546 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
VPS8-201ENST00000287546 MT2AP02795 61 aa2.92□□□□□ -1.94
VPS8-201ENST00000287546 LCE2AQ5TA79 106 aaPredicted RBP2.88□□□□□ -1.95
VPS8-201ENST00000287546 MT1FP04733 61 aa2.87□□□□□ -1.95
VPS8-201ENST00000287546 USH2AO75445 5202 aa2.86□□□□□ -1.95
VPS8-201ENST00000287546 KRTAP9-8Q9BYQ0 159 aa2.85□□□□□ -1.95
VPS8-201ENST00000287546 KRTAP19-1Q8IUB9 90 aa2.85□□□□□ -1.95
VPS8-201ENST00000287546 SPRR2EP22531 72 aa2.85□□□□□ -1.95
VPS8-201ENST00000287546 SPRR2BP35325 72 aa2.85□□□□□ -1.95
VPS8-201ENST00000287546 SPRR2AP35326 72 aa2.85□□□□□ -1.95
VPS8-201ENST00000287546 KRTAP19-8Q3LI54 63 aa2.85□□□□□ -1.95
VPS8-201ENST00000287546 INE1O15225 51 aa2.82□□□□□ -1.96
VPS8-201ENST00000287546 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
VPS8-201ENST00000287546 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
VPS8-201ENST00000287546 SPRR2DP22532 72 aa2.79□□□□□ -1.96
VPS8-201ENST00000287546 KRTAP12-4P60329 112 aa2.76□□□□□ -1.97
VPS8-201ENST00000287546 KRTAP9-3Q9BYQ3 159 aa2.74□□□□□ -1.97
VPS8-201ENST00000287546 MT1BP07438 61 aa2.73□□□□□ -1.97
VPS8-201ENST00000287546 LCE2BO14633 110 aa2.73□□□□□ -1.97
VPS8-201ENST00000287546 MT1XP80297 61 aa2.69□□□□□ -1.98
VPS8-201ENST00000287546 KRTAP9-2Q9BYQ4 174 aa2.68□□□□□ -1.98
VPS8-201ENST00000287546 SSPOA2VEC9 5147 aa2.65□□□□□ -1.99
VPS8-201ENST00000287546 KRTAP19-4Q3LI73 84 aa2.65□□□□□ -1.99
VPS8-201ENST00000287546 LCE2DQ5TA82 110 aaPredicted RBP2.61□□□□□ -1.99
VPS8-201ENST00000287546 KMT2DO14686 5537 aa2.59□□□□□ -2
VPS8-201ENST00000287546 FCGBPQ9Y6R7 5405 aaPredicted RBP2.58□□□□□ -2
VPS8-201ENST00000287546 KRTAP19-5Q3LI72 72 aa2.57□□□□□ -2
VPS8-201ENST00000287546 KRTAP9-6A0A140TA67 174 aa2.53□□□□□ -2
VPS8-201ENST00000287546 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms