RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 FAM236AA0A1B0GUQ0 79 aa6.56□□□□□ -1.36
HMGN3-201ENST00000275036 FAM236BA0A1B0GV22 79 aa6.56□□□□□ -1.36
HMGN3-201ENST00000275036 HIST1H4AP62805 103 aaKnown RBP6.56□□□□□ -1.36
HMGN3-201ENST00000275036 A0A087WVE0 104 aa6.55□□□□□ -1.36
HMGN3-201ENST00000275036 LOC101927531A0A1B0GV80 90 aa6.55□□□□□ -1.36
HMGN3-201ENST00000275036 KRTAP4-9Q9BYQ8 210 aa6.55□□□□□ -1.36
HMGN3-201ENST00000275036 UQCRQO14949 82 aa6.51□□□□□ -1.37
HMGN3-201ENST00000275036 MT1BP07438 61 aa6.51□□□□□ -1.37
HMGN3-201ENST00000275036 A0A1B0GV90 55 aa6.5□□□□□ -1.37
HMGN3-201ENST00000275036 H0Y9P7 68 aa6.5□□□□□ -1.37
HMGN3-201ENST00000275036 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
HMGN3-201ENST00000275036 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
HMGN3-201ENST00000275036 ATOX1O00244 68 aa6.46□□□□□ -1.38
HMGN3-201ENST00000275036 KRTAP19-8Q3LI54 63 aa6.46□□□□□ -1.38
HMGN3-201ENST00000275036 KRTAP6-3Q3LI67 103 aa6.46□□□□□ -1.38
HMGN3-201ENST00000275036 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
HMGN3-201ENST00000275036 KRTAP4-2Q9BYR5 136 aa6.44□□□□□ -1.38
HMGN3-201ENST00000275036 Q5VV11 94 aa6.42□□□□□ -1.38
HMGN3-201ENST00000275036 OCR1Q9BZK8 76 aa6.41□□□□□ -1.38
HMGN3-201ENST00000275036 NEBP20929 6669 aa6.4□□□□□ -1.38
HMGN3-201ENST00000275036 LINC00208Q96KT6 92 aa6.39□□□□□ -1.39
HMGN3-201ENST00000275036 A6NN06 94 aa6.38□□□□□ -1.39
HMGN3-201ENST00000275036 MUC12Q9UKN1 5478 aa6.37□□□□□ -1.39
HMGN3-201ENST00000275036 NDUFC1O43677 76 aa6.35□□□□□ -1.39
HMGN3-201ENST00000275036 IMUPQ9GZP8 106 aa6.34□□□□□ -1.39
HMGN3-201ENST00000275036 A8MUN3 132 aa6.33□□□□□ -1.4
HMGN3-201ENST00000275036 KRTAP10-5P60370 271 aa6.33□□□□□ -1.4
HMGN3-201ENST00000275036 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
HMGN3-201ENST00000275036 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
HMGN3-201ENST00000275036 H0YAA0 97 aa6.32□□□□□ -1.4
HMGN3-201ENST00000275036 MP68P56378 58 aa6.32□□□□□ -1.4
HMGN3-201ENST00000275036 KRTAP4-11Q9BYQ6 195 aa6.3□□□□□ -1.4
HMGN3-201ENST00000275036 J3QR89 54 aa6.28□□□□□ -1.4
HMGN3-201ENST00000275036 ADM2Q7Z4H4 148 aa6.26□□□□□ -1.41
HMGN3-201ENST00000275036 H3BPC8 53 aa6.24□□□□□ -1.41
HMGN3-201ENST00000275036 SCGB1A1P11684 91 aa6.21□□□□□ -1.42
HMGN3-201ENST00000275036 DMAC1Q96GE9 116 aa6.2□□□□□ -1.42
HMGN3-201ENST00000275036 KMT2DO14686 5537 aa6.19□□□□□ -1.42
HMGN3-201ENST00000275036 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
HMGN3-201ENST00000275036 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
HMGN3-201ENST00000275036 MT-ATP8P03928 68 aa6.15□□□□□ -1.42
HMGN3-201ENST00000275036 P0C880 135 aa6.15□□□□□ -1.42
HMGN3-201ENST00000275036 KRTAP19-4Q3LI73 84 aa6.14□□□□□ -1.43
HMGN3-201ENST00000275036 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
HMGN3-201ENST00000275036 MT1XP80297 61 aa6.08□□□□□ -1.44
HMGN3-201ENST00000275036 R4GN34 69 aa6.08□□□□□ -1.44
HMGN3-201ENST00000275036 TRAV7A0A075B6U4 112 aa6.06□□□□□ -1.44
HMGN3-201ENST00000275036 K7ERU9 68 aa6.06□□□□□ -1.44
HMGN3-201ENST00000275036 M0QZ58 72 aa6.05□□□□□ -1.44
HMGN3-201ENST00000275036 C20orf197Q8N268 126 aa6.05□□□□□ -1.44
HMGN3-201ENST00000275036 SMIM20Q8N5G0 67 aa6.03□□□□□ -1.44
HMGN3-201ENST00000275036 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
HMGN3-201ENST00000275036 ACYP2P14621 99 aa6.01□□□□□ -1.45
HMGN3-201ENST00000275036 KRTAP20-1Q3LI63 56 aa6.01□□□□□ -1.45
HMGN3-201ENST00000275036 PRO2289Q9P1D8 64 aa6.01□□□□□ -1.45
HMGN3-201ENST00000275036 SNURFQ9Y675 71 aa5.97□□□□□ -1.45
HMGN3-201ENST00000275036 LINC01554Q52M75 96 aa5.96□□□□□ -1.46
HMGN3-201ENST00000275036 SPRR2FQ96RM1 72 aa5.94□□□□□ -1.46
HMGN3-201ENST00000275036 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
HMGN3-201ENST00000275036 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
HMGN3-201ENST00000275036 CHKB-CPT1BH3BT56 60 aa5.88□□□□□ -1.47
HMGN3-201ENST00000275036 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
HMGN3-201ENST00000275036 SPRR2EP22531 72 aa5.86□□□□□ -1.47
HMGN3-201ENST00000275036 SPRR2BP35325 72 aa5.86□□□□□ -1.47
HMGN3-201ENST00000275036 SPRR2AP35326 72 aa5.86□□□□□ -1.47
HMGN3-201ENST00000275036 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
HMGN3-201ENST00000275036 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
HMGN3-201ENST00000275036 SERP2Q8N6R1 65 aa5.85□□□□□ -1.47
HMGN3-201ENST00000275036 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
HMGN3-201ENST00000275036 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
HMGN3-201ENST00000275036 KRTAP10-7P60409 375 aaPredicted RBP5.81□□□□□ -1.48
HMGN3-201ENST00000275036 LCE1AQ5T7P2 110 aa5.81□□□□□ -1.48
HMGN3-201ENST00000275036 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
HMGN3-201ENST00000275036 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
HMGN3-201ENST00000275036 COA5Q86WW8 74 aa5.72□□□□□ -1.49
HMGN3-201ENST00000275036 H3BS24 57 aa5.67□□□□□ -1.5
HMGN3-201ENST00000275036 COX7CP15954 63 aa5.67□□□□□ -1.5
HMGN3-201ENST00000275036 SPRR2DP22532 72 aa5.67□□□□□ -1.5
HMGN3-201ENST00000275036 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
HMGN3-201ENST00000275036 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
HMGN3-201ENST00000275036 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
HMGN3-201ENST00000275036 H7BZZ5 65 aa5.61□□□□□ -1.51
HMGN3-201ENST00000275036 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
HMGN3-201ENST00000275036 SERP1Q9Y6X1 66 aa5.56□□□□□ -1.52
HMGN3-201ENST00000275036 A0A0D9SG42 100 aa5.55□□□□□ -1.52
HMGN3-201ENST00000275036 SEC61GP60059 68 aa5.55□□□□□ -1.52
HMGN3-201ENST00000275036 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
HMGN3-201ENST00000275036 A0A1B0GU33 70 aa5.5□□□□□ -1.53
HMGN3-201ENST00000275036 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
HMGN3-201ENST00000275036 SPINT4Q6UDR6 99 aa5.45□□□□□ -1.54
HMGN3-201ENST00000275036 ANAPC13Q9BS18 74 aa5.45□□□□□ -1.54
HMGN3-201ENST00000275036 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
HMGN3-201ENST00000275036 CCDC179H3BU77 68 aa5.4□□□□□ -1.54
HMGN3-201ENST00000275036 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
HMGN3-201ENST00000275036 A0A1B0GU69 56 aa5.39□□□□□ -1.55
HMGN3-201ENST00000275036 MT1EP04732 61 aa5.38□□□□□ -1.55
HMGN3-201ENST00000275036 A8MU10 97 aa5.36□□□□□ -1.55
HMGN3-201ENST00000275036 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
HMGN3-201ENST00000275036 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
HMGN3-201ENST00000275036 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms