RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 RYR3Q15413 4870 aa5.89□□□□□ -1.47
GTF3C2-201ENST00000264720 FAT1Q14517 4588 aa5.89□□□□□ -1.47
GTF3C2-201ENST00000264720 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
GTF3C2-201ENST00000264720 KRTAP10-8P60410 259 aa5.85□□□□□ -1.47
GTF3C2-201ENST00000264720 H1FX-AS1Q4G0G2 97 aa5.82□□□□□ -1.48
GTF3C2-201ENST00000264720 HSPG2P98160 4391 aa5.81□□□□□ -1.48
GTF3C2-201ENST00000264720 RYR1P21817 5038 aa5.8□□□□□ -1.48
GTF3C2-201ENST00000264720 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
GTF3C2-201ENST00000264720 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
GTF3C2-201ENST00000264720 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
GTF3C2-201ENST00000264720 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
GTF3C2-201ENST00000264720 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
GTF3C2-201ENST00000264720 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
GTF3C2-201ENST00000264720 J3QL48 77 aa5.72□□□□□ -1.49
GTF3C2-201ENST00000264720 MT1HL1P0DM35 61 aa5.72□□□□□ -1.49
GTF3C2-201ENST00000264720 COX6B2Q6YFQ2 88 aa5.71□□□□□ -1.5
GTF3C2-201ENST00000264720 EPPK1P58107 5090 aaKnown RBP5.7□□□□□ -1.5
GTF3C2-201ENST00000264720 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
GTF3C2-201ENST00000264720 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
GTF3C2-201ENST00000264720 LRP1Q07954 4544 aaKnown RBP5.65□□□□□ -1.5
GTF3C2-201ENST00000264720 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
GTF3C2-201ENST00000264720 TNXBP22105 4242 aa5.63□□□□□ -1.51
GTF3C2-201ENST00000264720 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
GTF3C2-201ENST00000264720 XP32Q5T750 250 aa5.56□□□□□ -1.52
GTF3C2-201ENST00000264720 BIRC6Q9NR09 4857 aa5.54□□□□□ -1.52
GTF3C2-201ENST00000264720 MYCBP2O75592 4640 aa5.53□□□□□ -1.52
GTF3C2-201ENST00000264720 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
GTF3C2-201ENST00000264720 KRTAP13-4Q3LI77 160 aa5.51□□□□□ -1.53
GTF3C2-201ENST00000264720 HERC2O95714 4834 aa5.47□□□□□ -1.53
GTF3C2-201ENST00000264720 S4R3F8 94 aa5.47□□□□□ -1.53
GTF3C2-201ENST00000264720 SEC61BP60468 96 aaKnown RBP5.41□□□□□ -1.54
GTF3C2-201ENST00000264720 ABCA13Q86UQ4 5058 aa5.41□□□□□ -1.54
GTF3C2-201ENST00000264720 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
GTF3C2-201ENST00000264720 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
GTF3C2-201ENST00000264720 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
GTF3C2-201ENST00000264720 LRP2P98164 4655 aa5.24□□□□□ -1.57
GTF3C2-201ENST00000264720 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
GTF3C2-201ENST00000264720 LPAP08519 4548 aa5.23□□□□□ -1.57
GTF3C2-201ENST00000264720 KRTAP3-2Q9BYR7 98 aa5.23□□□□□ -1.57
GTF3C2-201ENST00000264720 PCLOQ9Y6V0 5065 aa5.19□□□□□ -1.58
GTF3C2-201ENST00000264720 KRTAP3-3Q9BYR6 98 aa5.18□□□□□ -1.58
GTF3C2-201ENST00000264720 M0QZ58 72 aa5.16□□□□□ -1.58
GTF3C2-201ENST00000264720 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.58
GTF3C2-201ENST00000264720 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
GTF3C2-201ENST00000264720 R4GN34 69 aa5.1□□□□□ -1.59
GTF3C2-201ENST00000264720 HERC1Q15751 4861 aa5.08□□□□□ -1.6
GTF3C2-201ENST00000264720 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
GTF3C2-201ENST00000264720 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
GTF3C2-201ENST00000264720 KRTAP19-2Q3LHN2 52 aa5□□□□□ -1.61
GTF3C2-201ENST00000264720 M0R2T5 61 aa4.88□□□□□ -1.63
GTF3C2-201ENST00000264720 LCE2CQ5TA81 110 aa4.88□□□□□ -1.63
GTF3C2-201ENST00000264720 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
GTF3C2-201ENST00000264720 MUC2Q02817 5179 aa4.82□□□□□ -1.64
GTF3C2-201ENST00000264720 MT1HP80294 61 aa4.81□□□□□ -1.64
GTF3C2-201ENST00000264720 RNF213Q63HN8 5207 aa4.81□□□□□ -1.64
GTF3C2-201ENST00000264720 LORP23490 312 aaPredicted RBP4.8□□□□□ -1.64
GTF3C2-201ENST00000264720 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
GTF3C2-201ENST00000264720 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
GTF3C2-201ENST00000264720 PRO2289Q9P1D8 64 aa4.73□□□□□ -1.65
GTF3C2-201ENST00000264720 TNP1P09430 55 aa4.68□□□□□ -1.66
GTF3C2-201ENST00000264720 FAT4Q6V0I7 4981 aa4.68□□□□□ -1.66
GTF3C2-201ENST00000264720 KRTAP10-10P60014 251 aa4.67□□□□□ -1.66
GTF3C2-201ENST00000264720 MT2AP02795 61 aa4.64□□□□□ -1.67
GTF3C2-201ENST00000264720 KRTAP9-8Q9BYQ0 159 aa4.63□□□□□ -1.67
GTF3C2-201ENST00000264720 MT1FP04733 61 aa4.61□□□□□ -1.67
GTF3C2-201ENST00000264720 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
GTF3C2-201ENST00000264720 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
GTF3C2-201ENST00000264720 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
GTF3C2-201ENST00000264720 INE1O15225 51 aa4.48□□□□□ -1.69
GTF3C2-201ENST00000264720 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.69
GTF3C2-201ENST00000264720 KRTAP9-3Q9BYQ3 159 aa4.46□□□□□ -1.69
GTF3C2-201ENST00000264720 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
GTF3C2-201ENST00000264720 MT1BP07438 61 aa4.37□□□□□ -1.71
GTF3C2-201ENST00000264720 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
GTF3C2-201ENST00000264720 LCE2BO14633 110 aa4.31□□□□□ -1.72
GTF3C2-201ENST00000264720 MT1XP80297 61 aa4.25□□□□□ -1.73
GTF3C2-201ENST00000264720 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
GTF3C2-201ENST00000264720 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
GTF3C2-201ENST00000264720 KRTAP9-2Q9BYQ4 174 aa4.19□□□□□ -1.74
GTF3C2-201ENST00000264720 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.75
GTF3C2-201ENST00000264720 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
GTF3C2-201ENST00000264720 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
GTF3C2-201ENST00000264720 USH2AO75445 5202 aa4.09□□□□□ -1.75
GTF3C2-201ENST00000264720 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
GTF3C2-201ENST00000264720 KRTAP10-7P60409 375 aaPredicted RBP4.08□□□□□ -1.76
GTF3C2-201ENST00000264720 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
GTF3C2-201ENST00000264720 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
GTF3C2-201ENST00000264720 KRTAP8-1Q8IUC2 63 aa4.01□□□□□ -1.77
GTF3C2-201ENST00000264720 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
GTF3C2-201ENST00000264720 FSIP2Q5CZC0 6907 aa3.91□□□□□ -1.78
GTF3C2-201ENST00000264720 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
GTF3C2-201ENST00000264720 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
GTF3C2-201ENST00000264720 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
GTF3C2-201ENST00000264720 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
GTF3C2-201ENST00000264720 FCGBPQ9Y6R7 5405 aaPredicted RBP3.78□□□□□ -1.8
GTF3C2-201ENST00000264720 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
GTF3C2-201ENST00000264720 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
GTF3C2-201ENST00000264720 KMT2DO14686 5537 aa3.76□□□□□ -1.81
GTF3C2-201ENST00000264720 KRTAP19-4Q3LI73 84 aa3.74□□□□□ -1.81
GTF3C2-201ENST00000264720 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 1523.5 ms