RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 KRTAP10-4P60372 401 aaPredicted RBP6.37□□□□□ -1.39
TCF3-201ENST00000262965 VPS13DQ5THJ4 4388 aa6.37□□□□□ -1.39
TCF3-201ENST00000262965 KRTAP3-2Q9BYR7 98 aa6.35□□□□□ -1.39
TCF3-201ENST00000262965 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
TCF3-201ENST00000262965 DNAH7Q8WXX0 4024 aa6.34□□□□□ -1.39
TCF3-201ENST00000262965 KRTAP3-3Q9BYR6 98 aa6.34□□□□□ -1.4
TCF3-201ENST00000262965 MT1HL1P0DM35 61 aa6.33□□□□□ -1.4
TCF3-201ENST00000262965 KMT2AQ03164 3969 aa6.33□□□□□ -1.4
TCF3-201ENST00000262965 ALMS1Q8TCU4 4167 aa6.26□□□□□ -1.41
TCF3-201ENST00000262965 DNAH11Q96DT5 4516 aa6.26□□□□□ -1.41
TCF3-201ENST00000262965 DYNC2H1Q8NCM8 4307 aaKnown RBP6.23□□□□□ -1.41
TCF3-201ENST00000262965 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.41
TCF3-201ENST00000262965 KRTAP4-5Q9BYR2 181 aa6.21□□□□□ -1.42
TCF3-201ENST00000262965 DNAH5Q8TE73 4624 aa6.21□□□□□ -1.42
TCF3-201ENST00000262965 DNAH17Q9UFH2 4485 aa6.2□□□□□ -1.42
TCF3-201ENST00000262965 DNAH2Q9P225 4427 aa6.18□□□□□ -1.42
TCF3-201ENST00000262965 HYDINQ4G0P3 5121 aa6.13□□□□□ -1.43
TCF3-201ENST00000262965 HECTD4Q9Y4D8 3996 aa6.08□□□□□ -1.44
TCF3-201ENST00000262965 DNAH6Q9C0G6 4158 aa6.07□□□□□ -1.44
TCF3-201ENST00000262965 LRP1BQ9NZR2 4599 aa6.07□□□□□ -1.44
TCF3-201ENST00000262965 DYNC1H1Q14204 4646 aaKnown RBP6.06□□□□□ -1.44
TCF3-201ENST00000262965 SACSQ9NZJ4 4579 aa6.04□□□□□ -1.44
TCF3-201ENST00000262965 LORP23490 312 aaPredicted RBP6.03□□□□□ -1.44
TCF3-201ENST00000262965 FAT1Q14517 4588 aa6.03□□□□□ -1.44
TCF3-201ENST00000262965 DNAH8Q96JB1 4490 aa6.02□□□□□ -1.45
TCF3-201ENST00000262965 FRAS1Q86XX4 4008 aa5.98□□□□□ -1.45
TCF3-201ENST00000262965 KMT2CQ8NEZ4 4911 aaKnown RBP5.95□□□□□ -1.46
TCF3-201ENST00000262965 PKHD1P08F94 4074 aa5.94□□□□□ -1.46
TCF3-201ENST00000262965 RYR2Q92736 4967 aa5.94□□□□□ -1.46
TCF3-201ENST00000262965 FAT2Q9NYQ8 4349 aa5.92□□□□□ -1.46
TCF3-201ENST00000262965 VPS13BQ7Z7G8 4022 aa5.91□□□□□ -1.46
TCF3-201ENST00000262965 PKD1P98161 4303 aa5.87□□□□□ -1.47
TCF3-201ENST00000262965 KIAA1109Q2LD37 5005 aa5.87□□□□□ -1.47
TCF3-201ENST00000262965 KRTAP10-12P60413 245 aa5.86□□□□□ -1.47
TCF3-201ENST00000262965 APOBP04114 4563 aaKnown RBP5.84□□□□□ -1.47
TCF3-201ENST00000262965 RYR1P21817 5038 aa5.82□□□□□ -1.48
TCF3-201ENST00000262965 RYR3Q15413 4870 aa5.82□□□□□ -1.48
TCF3-201ENST00000262965 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
TCF3-201ENST00000262965 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
TCF3-201ENST00000262965 CRCT1Q9UGL9 99 aa5.78□□□□□ -1.48
TCF3-201ENST00000262965 MYCBP2O75592 4640 aa5.75□□□□□ -1.49
TCF3-201ENST00000262965 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
TCF3-201ENST00000262965 LRP1Q07954 4544 aaKnown RBP5.74□□□□□ -1.49
TCF3-201ENST00000262965 INE1O15225 51 aa5.74□□□□□ -1.49
TCF3-201ENST00000262965 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
TCF3-201ENST00000262965 HSPG2P98160 4391 aa5.64□□□□□ -1.51
TCF3-201ENST00000262965 EPPK1P58107 5090 aaKnown RBP5.63□□□□□ -1.51
TCF3-201ENST00000262965 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
TCF3-201ENST00000262965 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
TCF3-201ENST00000262965 HERC2O95714 4834 aa5.48□□□□□ -1.53
TCF3-201ENST00000262965 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
TCF3-201ENST00000262965 BIRC6Q9NR09 4857 aa5.42□□□□□ -1.54
TCF3-201ENST00000262965 MT1HP80294 61 aa5.41□□□□□ -1.54
TCF3-201ENST00000262965 ABCA13Q86UQ4 5058 aa5.39□□□□□ -1.55
TCF3-201ENST00000262965 TNXBP22105 4242 aa5.39□□□□□ -1.55
TCF3-201ENST00000262965 KRTAP10-5P60370 271 aa5.37□□□□□ -1.55
TCF3-201ENST00000262965 LRP2P98164 4655 aa5.36□□□□□ -1.55
TCF3-201ENST00000262965 MT2AP02795 61 aa5.36□□□□□ -1.55
TCF3-201ENST00000262965 SPRR2GQ9BYE4 73 aa5.32□□□□□ -1.56
TCF3-201ENST00000262965 LPAP08519 4548 aa5.31□□□□□ -1.56
TCF3-201ENST00000262965 MT1FP04733 61 aa5.3□□□□□ -1.56
TCF3-201ENST00000262965 KRTAP8-1Q8IUC2 63 aa5.27□□□□□ -1.57
TCF3-201ENST00000262965 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
TCF3-201ENST00000262965 HERC1Q15751 4861 aa5.13□□□□□ -1.59
TCF3-201ENST00000262965 KRTAP19-1Q8IUB9 90 aa5.12□□□□□ -1.59
TCF3-201ENST00000262965 PCLOQ9Y6V0 5065 aa5.11□□□□□ -1.59
TCF3-201ENST00000262965 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
TCF3-201ENST00000262965 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
TCF3-201ENST00000262965 KRTAP10-7P60409 375 aaPredicted RBP5.05□□□□□ -1.6
TCF3-201ENST00000262965 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
TCF3-201ENST00000262965 MUC2Q02817 5179 aa4.99□□□□□ -1.61
TCF3-201ENST00000262965 KRTAP19-8Q3LI54 63 aa4.96□□□□□ -1.61
TCF3-201ENST00000262965 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.62
TCF3-201ENST00000262965 HMCN2Q8NDA2 5059 aa4.94□□□□□ -1.62
TCF3-201ENST00000262965 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
TCF3-201ENST00000262965 SPRR2FQ96RM1 72 aa4.93□□□□□ -1.62
TCF3-201ENST00000262965 MT1XP80297 61 aa4.92□□□□□ -1.62
TCF3-201ENST00000262965 RNF213Q63HN8 5207 aa4.92□□□□□ -1.62
TCF3-201ENST00000262965 UBR4Q5T4S7 5183 aa4.89□□□□□ -1.63
TCF3-201ENST00000262965 MT1BP07438 61 aa4.87□□□□□ -1.63
TCF3-201ENST00000262965 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
TCF3-201ENST00000262965 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
TCF3-201ENST00000262965 MUC17Q685J3 4493 aa4.84□□□□□ -1.64
TCF3-201ENST00000262965 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.64
TCF3-201ENST00000262965 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
TCF3-201ENST00000262965 FAT4Q6V0I7 4981 aa4.81□□□□□ -1.64
TCF3-201ENST00000262965 FLGP20930 4061 aaPredicted RBP4.76□□□□□ -1.65
TCF3-201ENST00000262965 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
TCF3-201ENST00000262965 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
TCF3-201ENST00000262965 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
TCF3-201ENST00000262965 MT1GP13640 62 aa4.72□□□□□ -1.65
TCF3-201ENST00000262965 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
TCF3-201ENST00000262965 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
TCF3-201ENST00000262965 LCE2BO14633 110 aa4.63□□□□□ -1.67
TCF3-201ENST00000262965 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
TCF3-201ENST00000262965 LCE2AQ5TA79 106 aaPredicted RBP4.56□□□□□ -1.68
TCF3-201ENST00000262965 SPRR2EP22531 72 aa4.46□□□□□ -1.7
TCF3-201ENST00000262965 SPRR2BP35325 72 aa4.46□□□□□ -1.7
TCF3-201ENST00000262965 SPRR2AP35326 72 aa4.46□□□□□ -1.7
TCF3-201ENST00000262965 MT1LQ93083 61 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms