RNA–Protein interactions for RNA: ENST00000262717.8

CDH20-201, Transcript of cadherin 20, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDH20, Length 3,882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-201ENST00000262717 XP32Q5T750 250 aa7.65□□□□□ -1.19
CDH20-201ENST00000262717 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
CDH20-201ENST00000262717 KMT2CQ8NEZ4 4911 aaKnown RBP7.63□□□□□ -1.19
CDH20-201ENST00000262717 H3BS24 57 aa7.62□□□□□ -1.19
CDH20-201ENST00000262717 KRTAP10-8P60410 259 aa7.58□□□□□ -1.2
CDH20-201ENST00000262717 J3QL48 77 aa7.57□□□□□ -1.2
CDH20-201ENST00000262717 FAT3Q8TDW7 4589 aa7.55□□□□□ -1.2
CDH20-201ENST00000262717 KIAA1109Q2LD37 5005 aa7.53□□□□□ -1.2
CDH20-201ENST00000262717 P0C880 135 aa7.5□□□□□ -1.21
CDH20-201ENST00000262717 RYR2Q92736 4967 aa7.47□□□□□ -1.21
CDH20-201ENST00000262717 RYR3Q15413 4870 aa7.45□□□□□ -1.22
CDH20-201ENST00000262717 RYR1P21817 5038 aa7.44□□□□□ -1.22
CDH20-201ENST00000262717 ROMO1P60602 79 aa7.43□□□□□ -1.22
CDH20-201ENST00000262717 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
CDH20-201ENST00000262717 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
CDH20-201ENST00000262717 C10orf95Q9H7T3 257 aa7.37□□□□□ -1.23
CDH20-201ENST00000262717 M0QZ58 72 aa7.36□□□□□ -1.23
CDH20-201ENST00000262717 KRTAP17-1Q9BYP8 105 aa7.35□□□□□ -1.23
CDH20-201ENST00000262717 KRTAP3-3Q9BYR6 98 aa7.35□□□□□ -1.23
CDH20-201ENST00000262717 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
CDH20-201ENST00000262717 KRTAP10-6P60371 365 aaPredicted RBP7.35□□□□□ -1.23
CDH20-201ENST00000262717 HSPG2P98160 4391 aa7.35□□□□□ -1.23
CDH20-201ENST00000262717 R4GN34 69 aa7.34□□□□□ -1.23
CDH20-201ENST00000262717 PKHD1L1Q86WI1 4243 aa7.31□□□□□ -1.24
CDH20-201ENST00000262717 KRTAP4-5Q9BYR2 181 aa7.3□□□□□ -1.24
CDH20-201ENST00000262717 LRP2P98164 4655 aa7.29□□□□□ -1.24
CDH20-201ENST00000262717 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
CDH20-201ENST00000262717 KRTAP3-2Q9BYR7 98 aa7.25□□□□□ -1.25
CDH20-201ENST00000262717 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
CDH20-201ENST00000262717 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
CDH20-201ENST00000262717 LPAP08519 4548 aa7.16□□□□□ -1.26
CDH20-201ENST00000262717 TNXBP22105 4242 aa7.15□□□□□ -1.26
CDH20-201ENST00000262717 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
CDH20-201ENST00000262717 EPPK1P58107 5090 aaKnown RBP7.11□□□□□ -1.27
CDH20-201ENST00000262717 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
CDH20-201ENST00000262717 A0A0A0MQY5 61 aa7.06□□□□□ -1.28
CDH20-201ENST00000262717 M0R2T5 61 aa7□□□□□ -1.29
CDH20-201ENST00000262717 ABCA13Q86UQ4 5058 aa6.99□□□□□ -1.29
CDH20-201ENST00000262717 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
CDH20-201ENST00000262717 HERC2O95714 4834 aa6.92□□□□□ -1.3
CDH20-201ENST00000262717 NDUFAF8A1L188 74 aa6.91□□□□□ -1.3
CDH20-201ENST00000262717 KRTAP4-1Q9BYQ7 146 aa6.9□□□□□ -1.3
CDH20-201ENST00000262717 MUC2Q02817 5179 aa6.82□□□□□ -1.32
CDH20-201ENST00000262717 PLAC4Q8WY50 150 aa6.64□□□□□ -1.35
CDH20-201ENST00000262717 LUZP6Q538Z0 58 aa6.63□□□□□ -1.35
CDH20-201ENST00000262717 HERC1Q15751 4861 aa6.62□□□□□ -1.35
CDH20-201ENST00000262717 TNP1P09430 55 aa6.59□□□□□ -1.35
CDH20-201ENST00000262717 KRTAP15-1Q3LI76 137 aa6.56□□□□□ -1.36
CDH20-201ENST00000262717 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
CDH20-201ENST00000262717 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
CDH20-201ENST00000262717 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
CDH20-201ENST00000262717 RNF213Q63HN8 5207 aa6.47□□□□□ -1.37
CDH20-201ENST00000262717 BIRC6Q9NR09 4857 aa6.44□□□□□ -1.38
CDH20-201ENST00000262717 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
CDH20-201ENST00000262717 PCLOQ9Y6V0 5065 aa6.39□□□□□ -1.39
CDH20-201ENST00000262717 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
CDH20-201ENST00000262717 FLGP20930 4061 aaPredicted RBP6.31□□□□□ -1.4
CDH20-201ENST00000262717 UBR4Q5T4S7 5183 aa6.3□□□□□ -1.4
CDH20-201ENST00000262717 HMCN2Q8NDA2 5059 aa6.23□□□□□ -1.41
CDH20-201ENST00000262717 MT1HP80294 61 aa6.2□□□□□ -1.42
CDH20-201ENST00000262717 LCE2CQ5TA81 110 aa6.16□□□□□ -1.42
CDH20-201ENST00000262717 MT1FP04733 61 aa6.14□□□□□ -1.43
CDH20-201ENST00000262717 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
CDH20-201ENST00000262717 MT2AP02795 61 aa6.12□□□□□ -1.43
CDH20-201ENST00000262717 KRTAP19-1Q8IUB9 90 aa6.11□□□□□ -1.43
CDH20-201ENST00000262717 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
CDH20-201ENST00000262717 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
CDH20-201ENST00000262717 KRTAP10-12P60413 245 aa5.92□□□□□ -1.46
CDH20-201ENST00000262717 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.47
CDH20-201ENST00000262717 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
CDH20-201ENST00000262717 KRTAP23-1A1A580 65 aa5.84□□□□□ -1.47
CDH20-201ENST00000262717 MT1BP07438 61 aa5.8□□□□□ -1.48
CDH20-201ENST00000262717 USH2AO75445 5202 aa5.79□□□□□ -1.48
CDH20-201ENST00000262717 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
CDH20-201ENST00000262717 KRTAP10-7P60409 375 aaPredicted RBP5.77□□□□□ -1.49
CDH20-201ENST00000262717 MT1XP80297 61 aa5.77□□□□□ -1.49
CDH20-201ENST00000262717 KRTAP10-5P60370 271 aa5.76□□□□□ -1.49
CDH20-201ENST00000262717 KRTAP19-8Q3LI54 63 aa5.74□□□□□ -1.49
CDH20-201ENST00000262717 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
CDH20-201ENST00000262717 KRTAP9-3Q9BYQ3 159 aa5.66□□□□□ -1.5
CDH20-201ENST00000262717 KMT2DO14686 5537 aa5.66□□□□□ -1.5
CDH20-201ENST00000262717 SPRR5A0A1B0GTR4 108 aa5.58□□□□□ -1.52
CDH20-201ENST00000262717 KRTAP19-5Q3LI72 72 aa5.58□□□□□ -1.52
CDH20-201ENST00000262717 KRTAP4-8A0A0G2JLE6 195 aa5.56□□□□□ -1.52
CDH20-201ENST00000262717 KRTAP4-8Q9BYQ9 185 aa5.56□□□□□ -1.52
CDH20-201ENST00000262717 LCE2BO14633 110 aa5.55□□□□□ -1.52
CDH20-201ENST00000262717 CRCT1Q9UGL9 99 aa5.36□□□□□ -1.55
CDH20-201ENST00000262717 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
CDH20-201ENST00000262717 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
CDH20-201ENST00000262717 LCE2AQ5TA79 106 aaPredicted RBP5.25□□□□□ -1.57
CDH20-201ENST00000262717 INE1O15225 51 aa5.2□□□□□ -1.58
CDH20-201ENST00000262717 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
CDH20-201ENST00000262717 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
CDH20-201ENST00000262717 SSPOA2VEC9 5147 aa5.09□□□□□ -1.59
CDH20-201ENST00000262717 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
CDH20-201ENST00000262717 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
CDH20-201ENST00000262717 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
CDH20-201ENST00000262717 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
CDH20-201ENST00000262717 MT1LQ93083 61 aa5.02□□□□□ -1.61
CDH20-201ENST00000262717 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms