RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 LOC101927531A0A1B0GV80 90 aa12.38□□□□□ -0.43
SCN1B-201ENST00000262631 SEC61GP60059 68 aa12.38□□□□□ -0.43
SCN1B-201ENST00000262631 LCE2CQ5TA81 110 aa12.33□□□□□ -0.44
SCN1B-201ENST00000262631 COA5Q86WW8 74 aa12.31□□□□□ -0.44
SCN1B-201ENST00000262631 CHKB-CPT1BH3BT56 60 aa12.3□□□□□ -0.44
SCN1B-201ENST00000262631 PRR15LQ9BU68 103 aa12.3□□□□□ -0.44
SCN1B-201ENST00000262631 RBM12B-AS1Q9P1G2 102 aa12.29□□□□□ -0.44
SCN1B-201ENST00000262631 COX6B2Q6YFQ2 88 aa12.27□□□□□ -0.45
SCN1B-201ENST00000262631 LINC01558Q9Y6Z2 57 aa12.2□□□□□ -0.46
SCN1B-201ENST00000262631 A6NED7 52 aa12.16□□□□□ -0.46
SCN1B-201ENST00000262631 CDC42SE1Q9NRR8 79 aa12.16□□□□□ -0.46
SCN1B-201ENST00000262631 KTN1-AS1Q86SY8 53 aa12.15□□□□□ -0.46
SCN1B-201ENST00000262631 KRTAP3-1Q9BYR8 98 aa12.13□□□□□ -0.47
SCN1B-201ENST00000262631 FLGP20930 4061 aaPredicted RBP12.13□□□□□ -0.47
SCN1B-201ENST00000262631 MT1HP80294 61 aa12.1□□□□□ -0.47
SCN1B-201ENST00000262631 LCA10Q71F78 164 aa12.08□□□□□ -0.48
SCN1B-201ENST00000262631 LCE2AQ5TA79 106 aaPredicted RBP12.04□□□□□ -0.48
SCN1B-201ENST00000262631 A8MU10 97 aa12.03□□□□□ -0.48
SCN1B-201ENST00000262631 H1FX-AS1Q4G0G2 97 aa12.03□□□□□ -0.48
SCN1B-201ENST00000262631 SPTSSBQ8NFR3 76 aa12.03□□□□□ -0.48
SCN1B-201ENST00000262631 A6NN06 94 aa12.02□□□□□ -0.49
SCN1B-201ENST00000262631 M0R2T5 61 aa11.9□□□□□ -0.5
SCN1B-201ENST00000262631 ACYP2P14621 99 aa11.88□□□□□ -0.51
SCN1B-201ENST00000262631 DMAC1Q96GE9 116 aa11.85□□□□□ -0.51
SCN1B-201ENST00000262631 S4R3F8 94 aa11.81□□□□□ -0.52
SCN1B-201ENST00000262631 KRTAP10-6P60371 365 aaPredicted RBP11.73□□□□□ -0.53
SCN1B-201ENST00000262631 KRTAP3-3Q9BYR6 98 aa11.73□□□□□ -0.53
SCN1B-201ENST00000262631 LORP23490 312 aaPredicted RBP11.7□□□□□ -0.54
SCN1B-201ENST00000262631 A0A1B0GU69 56 aa11.62□□□□□ -0.55
SCN1B-201ENST00000262631 CSAG1Q6PB30 78 aa11.61□□□□□ -0.55
SCN1B-201ENST00000262631 SPATA8Q6RVD6 105 aa11.59□□□□□ -0.55
SCN1B-201ENST00000262631 KRTAP9-8Q9BYQ0 159 aa11.59□□□□□ -0.55
SCN1B-201ENST00000262631 UQCR11O14957 56 aa11.5□□□□□ -0.57
SCN1B-201ENST00000262631 MT2AP02795 61 aa11.49□□□□□ -0.57
SCN1B-201ENST00000262631 MIR22HGQ0VDD5 57 aa11.46□□□□□ -0.57
SCN1B-201ENST00000262631 MT1FP04733 61 aa11.43□□□□□ -0.58
SCN1B-201ENST00000262631 KRTAP9-2Q9BYQ4 174 aa11.36□□□□□ -0.59
SCN1B-201ENST00000262631 KRTAP10-10P60014 251 aa11.35□□□□□ -0.59
SCN1B-201ENST00000262631 H0YAA0 97 aa11.28□□□□□ -0.6
SCN1B-201ENST00000262631 PRAC1Q96KF2 57 aa11.28□□□□□ -0.6
SCN1B-201ENST00000262631 LINC01554Q52M75 96 aa11.25□□□□□ -0.61
SCN1B-201ENST00000262631 ADM2Q7Z4H4 148 aa11.24□□□□□ -0.61
SCN1B-201ENST00000262631 LCE2DQ5TA82 110 aaPredicted RBP11.21□□□□□ -0.61
SCN1B-201ENST00000262631 KRTAP9-3Q9BYQ3 159 aa11.18□□□□□ -0.62
SCN1B-201ENST00000262631 KRTAP3-2Q9BYR7 98 aa11.17□□□□□ -0.62
SCN1B-201ENST00000262631 P0C880 135 aa11.14□□□□□ -0.63
SCN1B-201ENST00000262631 KRTAP19-1Q8IUB9 90 aa11.01□□□□□ -0.65
SCN1B-201ENST00000262631 LCE2BO14633 110 aa10.98□□□□□ -0.65
SCN1B-201ENST00000262631 CRIPTQ9P021 101 aa10.97□□□□□ -0.65
SCN1B-201ENST00000262631 SPRR2GQ9BYE4 73 aa10.95□□□□□ -0.66
SCN1B-201ENST00000262631 A0A1B0GU33 70 aa10.89□□□□□ -0.67
SCN1B-201ENST00000262631 USH2AO75445 5202 aa10.87□□□□□ -0.67
SCN1B-201ENST00000262631 KRTAP9-6A0A140TA67 174 aa10.86□□□□□ -0.67
SCN1B-201ENST00000262631 R4GN34 69 aa10.86□□□□□ -0.67
SCN1B-201ENST00000262631 M0QZ58 72 aa10.83□□□□□ -0.68
SCN1B-201ENST00000262631 FSIP2Q5CZC0 6907 aa10.83□□□□□ -0.68
SCN1B-201ENST00000262631 KRTAP25-1Q3LHN0 102 aa10.8□□□□□ -0.68
SCN1B-201ENST00000262631 K7ERS5 55 aa10.79□□□□□ -0.68
SCN1B-201ENST00000262631 CRCT1Q9UGL9 99 aa10.79□□□□□ -0.68
SCN1B-201ENST00000262631 KRTAP19-8Q3LI54 63 aa10.75□□□□□ -0.69
SCN1B-201ENST00000262631 KRTAP13-4Q3LI77 160 aa10.74□□□□□ -0.69
SCN1B-201ENST00000262631 MT1BP07438 61 aa10.69□□□□□ -0.7
SCN1B-201ENST00000262631 SSPOA2VEC9 5147 aa10.63□□□□□ -0.71
SCN1B-201ENST00000262631 H3BS24 57 aa10.55□□□□□ -0.72
SCN1B-201ENST00000262631 ROMO1P60602 79 aa10.53□□□□□ -0.72
SCN1B-201ENST00000262631 A0A0D9SG42 100 aa10.45□□□□□ -0.74
SCN1B-201ENST00000262631 KRTAP19-6Q3LI70 58 aa10.41□□□□□ -0.74
SCN1B-201ENST00000262631 PLAC4Q8WY50 150 aa10.41□□□□□ -0.74
SCN1B-201ENST00000262631 FCGBPQ9Y6R7 5405 aaPredicted RBP10.27□□□□□ -0.77
SCN1B-201ENST00000262631 KRTAP12-1P59990 96 aa10.26□□□□□ -0.77
SCN1B-201ENST00000262631 KRTAP10-5P60370 271 aa10.24□□□□□ -0.77
SCN1B-201ENST00000262631 KRTAP12-2P59991 146 aa10.22□□□□□ -0.77
SCN1B-201ENST00000262631 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
SCN1B-201ENST00000262631 MT1XP80297 61 aa10.22□□□□□ -0.77
SCN1B-201ENST00000262631 CAMK2N1Q7Z7J9 78 aa10.1□□□□□ -0.79
SCN1B-201ENST00000262631 PRO2289Q9P1D8 64 aa10.09□□□□□ -0.79
SCN1B-201ENST00000262631 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.02□□□□□ -0.81
SCN1B-201ENST00000262631 KRTAP15-1Q3LI76 137 aa9.9□□□□□ -0.83
SCN1B-201ENST00000262631 C10orf95Q9H7T3 257 aa9.87□□□□□ -0.83
SCN1B-201ENST00000262631 KRTAP9-7A8MTY7 169 aa9.81□□□□□ -0.84
SCN1B-201ENST00000262631 MACF1Q9UPN3 7388 aaKnown RBP9.78□□□□□ -0.84
SCN1B-201ENST00000262631 KRTAP10-7P60409 375 aaPredicted RBP9.78□□□□□ -0.84
SCN1B-201ENST00000262631 KMT2DO14686 5537 aa9.68□□□□□ -0.86
SCN1B-201ENST00000262631 KRTAP10-12P60413 245 aa9.67□□□□□ -0.86
SCN1B-201ENST00000262631 NDUFAF8A1L188 74 aa9.65□□□□□ -0.86
SCN1B-201ENST00000262631 SYNE2Q8WXH0 6885 aaKnown RBP9.58□□□□□ -0.88
SCN1B-201ENST00000262631 KRTAP4-8A0A0G2JLE6 195 aa9.56□□□□□ -0.88
SCN1B-201ENST00000262631 KRTAP4-8Q9BYQ9 185 aa9.56□□□□□ -0.88
SCN1B-201ENST00000262631 TNP1P09430 55 aa9.49□□□□□ -0.89
SCN1B-201ENST00000262631 KRTAP6-3Q3LI67 103 aa9.48□□□□□ -0.89
SCN1B-201ENST00000262631 KRTAP8-1Q8IUC2 63 aa9.4□□□□□ -0.9
SCN1B-201ENST00000262631 PP632Q6XCG6 107 aa9.35□□□□□ -0.91
SCN1B-201ENST00000262631 KRTAP5-9P26371 169 aa9.28□□□□□ -0.92
SCN1B-201ENST00000262631 LCE3AQ5TA76 89 aa9.26□□□□□ -0.93
SCN1B-201ENST00000262631 SPRR2FQ96RM1 72 aa9.2□□□□□ -0.94
SCN1B-201ENST00000262631 MUC12Q9UKN1 5478 aa9.16□□□□□ -0.94
SCN1B-201ENST00000262631 KRTAP19-7Q3SYF9 63 aa9.13□□□□□ -0.95
SCN1B-201ENST00000262631 KRTAP19-5Q3LI72 72 aa9.09□□□□□ -0.95
SCN1B-201ENST00000262631 LUZP6Q538Z0 58 aa9.07□□□□□ -0.96
SCN1B-201ENST00000262631 MDN1Q9NU22 5596 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms