RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 ZNF469Q96JG9 3925 aaPredicted RBP4.62□□□□□ -1.67
PKD1-201ENST00000262304 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
PKD1-201ENST00000262304 MT1HL1P0DM35 61 aa4.55□□□□□ -1.68
PKD1-201ENST00000262304 DNAH2Q9P225 4427 aa4.55□□□□□ -1.68
PKD1-201ENST00000262304 KRTAP4-5Q9BYR2 181 aa4.5□□□□□ -1.69
PKD1-201ENST00000262304 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
PKD1-201ENST00000262304 HUWE1Q7Z6Z7 4374 aaKnown RBP4.48□□□□□ -1.69
PKD1-201ENST00000262304 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
PKD1-201ENST00000262304 DNAH6Q9C0G6 4158 aa4.46□□□□□ -1.69
PKD1-201ENST00000262304 KRTAP3-2Q9BYR7 98 aa4.46□□□□□ -1.7
PKD1-201ENST00000262304 KMT2AQ03164 3969 aa4.46□□□□□ -1.7
PKD1-201ENST00000262304 KRTAP10-4P60372 401 aaPredicted RBP4.42□□□□□ -1.7
PKD1-201ENST00000262304 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
PKD1-201ENST00000262304 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
PKD1-201ENST00000262304 KRTAP8-1Q8IUC2 63 aa4.31□□□□□ -1.72
PKD1-201ENST00000262304 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
PKD1-201ENST00000262304 FLGP20930 4061 aaPredicted RBP4.28□□□□□ -1.72
PKD1-201ENST00000262304 VPS13BQ7Z7G8 4022 aa4.28□□□□□ -1.72
PKD1-201ENST00000262304 FRAS1Q86XX4 4008 aa4.27□□□□□ -1.73
PKD1-201ENST00000262304 DNAH9Q9NYC9 4486 aa4.27□□□□□ -1.73
PKD1-201ENST00000262304 PRKDCP78527 4128 aaKnown RBP4.23□□□□□ -1.73
PKD1-201ENST00000262304 PLECQ15149 4684 aaKnown RBP4.23□□□□□ -1.73
PKD1-201ENST00000262304 DNAH5Q8TE73 4624 aa4.18□□□□□ -1.74
PKD1-201ENST00000262304 DNAH11Q96DT5 4516 aa4.16□□□□□ -1.74
PKD1-201ENST00000262304 DNHD1Q96M86 4753 aa4.15□□□□□ -1.74
PKD1-201ENST00000262304 DNAH10Q8IVF4 4471 aa4.15□□□□□ -1.75
PKD1-201ENST00000262304 VPS13DQ5THJ4 4388 aa4.13□□□□□ -1.75
PKD1-201ENST00000262304 RYR1P21817 5038 aa4.1□□□□□ -1.75
PKD1-201ENST00000262304 KRTAP10-7P60409 375 aaPredicted RBP4.1□□□□□ -1.75
PKD1-201ENST00000262304 FAT2Q9NYQ8 4349 aa4.08□□□□□ -1.76
PKD1-201ENST00000262304 STARD9Q9P2P6 4700 aa4.03□□□□□ -1.76
PKD1-201ENST00000262304 DYNC2H1Q8NCM8 4307 aaKnown RBP4.02□□□□□ -1.77
PKD1-201ENST00000262304 PKHD1P08F94 4074 aa4.01□□□□□ -1.77
PKD1-201ENST00000262304 DNAH17Q9UFH2 4485 aa4.01□□□□□ -1.77
PKD1-201ENST00000262304 KRTAP4-1Q9BYQ7 146 aa4□□□□□ -1.77
PKD1-201ENST00000262304 MT1HP80294 61 aa3.99□□□□□ -1.77
PKD1-201ENST00000262304 KRTAP19-5Q3LI72 72 aa3.98□□□□□ -1.77
PKD1-201ENST00000262304 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
PKD1-201ENST00000262304 DYNC1H1Q14204 4646 aaKnown RBP3.96□□□□□ -1.77
PKD1-201ENST00000262304 RYR3Q15413 4870 aa3.94□□□□□ -1.78
PKD1-201ENST00000262304 LRP1BQ9NZR2 4599 aa3.94□□□□□ -1.78
PKD1-201ENST00000262304 LCE3BQ5TA77 95 aa3.93□□□□□ -1.78
PKD1-201ENST00000262304 SACSQ9NZJ4 4579 aa3.91□□□□□ -1.78
PKD1-201ENST00000262304 DNAH8Q96JB1 4490 aa3.89□□□□□ -1.79
PKD1-201ENST00000262304 MT2AP02795 61 aa3.89□□□□□ -1.79
PKD1-201ENST00000262304 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
PKD1-201ENST00000262304 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
PKD1-201ENST00000262304 SPRR2GQ9BYE4 73 aa3.85□□□□□ -1.79
PKD1-201ENST00000262304 MT1FP04733 61 aa3.83□□□□□ -1.8
PKD1-201ENST00000262304 FAT1Q14517 4588 aa3.81□□□□□ -1.8
PKD1-201ENST00000262304 PKHD1L1Q86WI1 4243 aa3.81□□□□□ -1.8
PKD1-201ENST00000262304 HYDINQ4G0P3 5121 aa3.79□□□□□ -1.8
PKD1-201ENST00000262304 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
PKD1-201ENST00000262304 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
PKD1-201ENST00000262304 SPRR2EP22531 72 aa3.75□□□□□ -1.81
PKD1-201ENST00000262304 SPRR2BP35325 72 aa3.75□□□□□ -1.81
PKD1-201ENST00000262304 SPRR2AP35326 72 aa3.75□□□□□ -1.81
PKD1-201ENST00000262304 LRP1Q07954 4544 aaKnown RBP3.73□□□□□ -1.81
PKD1-201ENST00000262304 APOBP04114 4563 aaKnown RBP3.72□□□□□ -1.81
PKD1-201ENST00000262304 PKD1P98161 4303 aa3.7□□□□□ -1.82
PKD1-201ENST00000262304 MT1GP13640 62 aa3.69□□□□□ -1.82
PKD1-201ENST00000262304 RYR2Q92736 4967 aa3.69□□□□□ -1.82
PKD1-201ENST00000262304 KIAA1109Q2LD37 5005 aa3.69□□□□□ -1.82
PKD1-201ENST00000262304 FAT3Q8TDW7 4589 aa3.67□□□□□ -1.82
PKD1-201ENST00000262304 MYCBP2O75592 4640 aa3.66□□□□□ -1.82
PKD1-201ENST00000262304 SPRR2DP22532 72 aa3.65□□□□□ -1.83
PKD1-201ENST00000262304 KRTAP17-1Q9BYP8 105 aa3.63□□□□□ -1.83
PKD1-201ENST00000262304 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
PKD1-201ENST00000262304 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
PKD1-201ENST00000262304 TNXBP22105 4242 aa3.56□□□□□ -1.84
PKD1-201ENST00000262304 HERC2O95714 4834 aa3.55□□□□□ -1.84
PKD1-201ENST00000262304 LCE2BO14633 110 aa3.54□□□□□ -1.84
PKD1-201ENST00000262304 HSPG2P98160 4391 aa3.54□□□□□ -1.84
PKD1-201ENST00000262304 KRTAP19-1Q8IUB9 90 aa3.53□□□□□ -1.84
PKD1-201ENST00000262304 UBR4Q5T4S7 5183 aa3.51□□□□□ -1.85
PKD1-201ENST00000262304 BIRC6Q9NR09 4857 aa3.51□□□□□ -1.85
PKD1-201ENST00000262304 MT1XP80297 61 aa3.51□□□□□ -1.85
PKD1-201ENST00000262304 ABCA13Q86UQ4 5058 aa3.5□□□□□ -1.85
PKD1-201ENST00000262304 HERC1Q15751 4861 aa3.5□□□□□ -1.85
PKD1-201ENST00000262304 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
PKD1-201ENST00000262304 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.85
PKD1-201ENST00000262304 KRTAP9-8Q9BYQ0 159 aa3.46□□□□□ -1.85
PKD1-201ENST00000262304 LRP2P98164 4655 aa3.45□□□□□ -1.86
PKD1-201ENST00000262304 MT1BP07438 61 aa3.44□□□□□ -1.86
PKD1-201ENST00000262304 EPPK1P58107 5090 aaKnown RBP3.44□□□□□ -1.86
PKD1-201ENST00000262304 LCE2CQ5TA81 110 aa3.42□□□□□ -1.86
PKD1-201ENST00000262304 KRTAP9-3Q9BYQ3 159 aa3.42□□□□□ -1.86
PKD1-201ENST00000262304 PRM1P04553 51 aa3.42□□□□□ -1.86
PKD1-201ENST00000262304 KRTAP4-8A0A0G2JLE6 195 aa3.4□□□□□ -1.87
PKD1-201ENST00000262304 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.87
PKD1-201ENST00000262304 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
PKD1-201ENST00000262304 KMT2CQ8NEZ4 4911 aaKnown RBP3.37□□□□□ -1.87
PKD1-201ENST00000262304 MT4P47944 62 aa3.34□□□□□ -1.87
PKD1-201ENST00000262304 LCE2DQ5TA82 110 aaPredicted RBP3.32□□□□□ -1.88
PKD1-201ENST00000262304 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
PKD1-201ENST00000262304 LOC100996750A0A140TA64 210 aa3.3□□□□□ -1.88
PKD1-201ENST00000262304 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
PKD1-201ENST00000262304 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
PKD1-201ENST00000262304 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
PKD1-201ENST00000262304 KRTAP19-3Q7Z4W3 81 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms