RNA–Protein interactions for RNA: ENST00000258646.3

RCBTB1-201, Transcript of RCC1 and BTB domain containing protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RCBTB1, Length 3,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1-201ENST00000258646 A0A1B0GU33 70 aa4.22□□□□□ -1.73
RCBTB1-201ENST00000258646 BIRC6Q9NR09 4857 aa4.21□□□□□ -1.74
RCBTB1-201ENST00000258646 DYNC2H1Q8NCM8 4307 aaKnown RBP4.2□□□□□ -1.74
RCBTB1-201ENST00000258646 APOBP04114 4563 aaKnown RBP4.2□□□□□ -1.74
RCBTB1-201ENST00000258646 KRTAP10-10P60014 251 aa4.2□□□□□ -1.74
RCBTB1-201ENST00000258646 DNAH2Q9P225 4427 aa4.2□□□□□ -1.74
RCBTB1-201ENST00000258646 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
RCBTB1-201ENST00000258646 FAT3Q8TDW7 4589 aa4.17□□□□□ -1.74
RCBTB1-201ENST00000258646 FAT2Q9NYQ8 4349 aa4.17□□□□□ -1.74
RCBTB1-201ENST00000258646 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
RCBTB1-201ENST00000258646 VPS13BQ7Z7G8 4022 aa4.16□□□□□ -1.74
RCBTB1-201ENST00000258646 MYCBP2O75592 4640 aa4.16□□□□□ -1.74
RCBTB1-201ENST00000258646 LRP1Q07954 4544 aaKnown RBP4.16□□□□□ -1.74
RCBTB1-201ENST00000258646 DNAH7Q8WXX0 4024 aa4.15□□□□□ -1.74
RCBTB1-201ENST00000258646 PKHD1P08F94 4074 aa4.15□□□□□ -1.75
RCBTB1-201ENST00000258646 DNAH8Q96JB1 4490 aa4.14□□□□□ -1.75
RCBTB1-201ENST00000258646 PLAC4Q8WY50 150 aa4.13□□□□□ -1.75
RCBTB1-201ENST00000258646 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
RCBTB1-201ENST00000258646 SPATA8Q6RVD6 105 aa4.11□□□□□ -1.75
RCBTB1-201ENST00000258646 DNAH6Q9C0G6 4158 aa4.1□□□□□ -1.75
RCBTB1-201ENST00000258646 CRIPTQ9P021 101 aa4.08□□□□□ -1.76
RCBTB1-201ENST00000258646 LRP2P98164 4655 aa4.02□□□□□ -1.77
RCBTB1-201ENST00000258646 HSPG2P98160 4391 aa4.01□□□□□ -1.77
RCBTB1-201ENST00000258646 PCLOQ9Y6V0 5065 aa4.01□□□□□ -1.77
RCBTB1-201ENST00000258646 FRAS1Q86XX4 4008 aa4□□□□□ -1.77
RCBTB1-201ENST00000258646 ABCA13Q86UQ4 5058 aa3.99□□□□□ -1.77
RCBTB1-201ENST00000258646 P0C880 135 aa3.99□□□□□ -1.77
RCBTB1-201ENST00000258646 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.78
RCBTB1-201ENST00000258646 KRTAP3-1Q9BYR8 98 aa3.96□□□□□ -1.78
RCBTB1-201ENST00000258646 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
RCBTB1-201ENST00000258646 HECTD4Q9Y4D8 3996 aa3.92□□□□□ -1.78
RCBTB1-201ENST00000258646 H0YAA0 97 aa3.92□□□□□ -1.78
RCBTB1-201ENST00000258646 ROMO1P60602 79 aa3.9□□□□□ -1.78
RCBTB1-201ENST00000258646 PKD1P98161 4303 aa3.9□□□□□ -1.79
RCBTB1-201ENST00000258646 HERC1Q15751 4861 aa3.9□□□□□ -1.79
RCBTB1-201ENST00000258646 PRO2289Q9P1D8 64 aa3.81□□□□□ -1.8
RCBTB1-201ENST00000258646 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
RCBTB1-201ENST00000258646 MT1HP80294 61 aa3.79□□□□□ -1.8
RCBTB1-201ENST00000258646 LPAP08519 4548 aa3.78□□□□□ -1.8
RCBTB1-201ENST00000258646 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
RCBTB1-201ENST00000258646 TNP1P09430 55 aa3.78□□□□□ -1.8
RCBTB1-201ENST00000258646 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
RCBTB1-201ENST00000258646 UBR4Q5T4S7 5183 aa3.76□□□□□ -1.81
RCBTB1-201ENST00000258646 KRTAP3-3Q9BYR6 98 aa3.75□□□□□ -1.81
RCBTB1-201ENST00000258646 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
RCBTB1-201ENST00000258646 KRTAP10-6P60371 365 aaPredicted RBP3.71□□□□□ -1.81
RCBTB1-201ENST00000258646 LORP23490 312 aaPredicted RBP3.68□□□□□ -1.82
RCBTB1-201ENST00000258646 KRTAP13-4Q3LI77 160 aa3.67□□□□□ -1.82
RCBTB1-201ENST00000258646 MT2AP02795 61 aa3.66□□□□□ -1.82
RCBTB1-201ENST00000258646 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
RCBTB1-201ENST00000258646 MUC2Q02817 5179 aa3.64□□□□□ -1.83
RCBTB1-201ENST00000258646 KRTAP3-2Q9BYR7 98 aa3.63□□□□□ -1.83
RCBTB1-201ENST00000258646 MT1FP04733 61 aa3.63□□□□□ -1.83
RCBTB1-201ENST00000258646 HMCN2Q8NDA2 5059 aa3.61□□□□□ -1.83
RCBTB1-201ENST00000258646 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
RCBTB1-201ENST00000258646 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.83
RCBTB1-201ENST00000258646 TNXBP22105 4242 aa3.58□□□□□ -1.84
RCBTB1-201ENST00000258646 LCE2CQ5TA81 110 aa3.57□□□□□ -1.84
RCBTB1-201ENST00000258646 FAT4Q6V0I7 4981 aa3.57□□□□□ -1.84
RCBTB1-201ENST00000258646 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
RCBTB1-201ENST00000258646 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
RCBTB1-201ENST00000258646 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
RCBTB1-201ENST00000258646 KRTAP9-8Q9BYQ0 159 aa3.48□□□□□ -1.85
RCBTB1-201ENST00000258646 PP632Q6XCG6 107 aa3.45□□□□□ -1.86
RCBTB1-201ENST00000258646 SPRR2GQ9BYE4 73 aa3.44□□□□□ -1.86
RCBTB1-201ENST00000258646 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
RCBTB1-201ENST00000258646 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
RCBTB1-201ENST00000258646 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
RCBTB1-201ENST00000258646 KRTAP19-1Q8IUB9 90 aa3.41□□□□□ -1.86
RCBTB1-201ENST00000258646 KRTAP8-1Q8IUC2 63 aa3.4□□□□□ -1.87
RCBTB1-201ENST00000258646 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
RCBTB1-201ENST00000258646 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
RCBTB1-201ENST00000258646 KRTAP9-3Q9BYQ3 159 aa3.37□□□□□ -1.87
RCBTB1-201ENST00000258646 LCE2BO14633 110 aa3.34□□□□□ -1.88
RCBTB1-201ENST00000258646 LCE2DQ5TA82 110 aaPredicted RBP3.33□□□□□ -1.88
RCBTB1-201ENST00000258646 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
RCBTB1-201ENST00000258646 FLGP20930 4061 aaPredicted RBP3.31□□□□□ -1.88
RCBTB1-201ENST00000258646 MT1BP07438 61 aa3.3□□□□□ -1.88
RCBTB1-201ENST00000258646 KRTAP19-8Q3LI54 63 aa3.29□□□□□ -1.88
RCBTB1-201ENST00000258646 LCE3AQ5TA76 89 aa3.29□□□□□ -1.88
RCBTB1-201ENST00000258646 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
RCBTB1-201ENST00000258646 KRTAP9-6A0A140TA67 174 aa3.24□□□□□ -1.89
RCBTB1-201ENST00000258646 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
RCBTB1-201ENST00000258646 USH2AO75445 5202 aa3.2□□□□□ -1.9
RCBTB1-201ENST00000258646 KRTAP10-7P60409 375 aaPredicted RBP3.2□□□□□ -1.9
RCBTB1-201ENST00000258646 MT1XP80297 61 aa3.2□□□□□ -1.9
RCBTB1-201ENST00000258646 KRTAP4-8A0A0G2JLE6 195 aa3.18□□□□□ -1.9
RCBTB1-201ENST00000258646 KRTAP4-8Q9BYQ9 185 aa3.18□□□□□ -1.9
RCBTB1-201ENST00000258646 SPRR2EP22531 72 aa3.12□□□□□ -1.91
RCBTB1-201ENST00000258646 SPRR2BP35325 72 aa3.12□□□□□ -1.91
RCBTB1-201ENST00000258646 SPRR2AP35326 72 aa3.12□□□□□ -1.91
RCBTB1-201ENST00000258646 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
RCBTB1-201ENST00000258646 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
RCBTB1-201ENST00000258646 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
RCBTB1-201ENST00000258646 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
RCBTB1-201ENST00000258646 KRTAP9-7A8MTY7 169 aa3.02□□□□□ -1.93
RCBTB1-201ENST00000258646 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
RCBTB1-201ENST00000258646 SPRR2DP22532 72 aa3□□□□□ -1.93
RCBTB1-201ENST00000258646 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
RCBTB1-201ENST00000258646 KMT2DO14686 5537 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms