RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 KRTAP3-1Q9BYR8 98 aa7.94□□□□□ -1.14
DDX49-201ENST00000247003 DMBT1Q9UGM3 2413 aaPredicted RBP7.89□□□□□ -1.15
DDX49-201ENST00000247003 MIR22HGQ0VDD5 57 aa7.88□□□□□ -1.15
DDX49-201ENST00000247003 ABCA13Q86UQ4 5058 aa7.88□□□□□ -1.15
DDX49-201ENST00000247003 SPATA8Q6RVD6 105 aa7.86□□□□□ -1.15
DDX49-201ENST00000247003 TPRXLQ17RH7 258 aa7.85□□□□□ -1.15
DDX49-201ENST00000247003 A6NN06 94 aa7.8□□□□□ -1.16
DDX49-201ENST00000247003 KTN1-AS1Q86SY8 53 aa7.75□□□□□ -1.17
DDX49-201ENST00000247003 S4R3F8 94 aa7.74□□□□□ -1.17
DDX49-201ENST00000247003 A0A1B0GU33 70 aa7.73□□□□□ -1.17
DDX49-201ENST00000247003 H1FX-AS1Q4G0G2 97 aa7.71□□□□□ -1.18
DDX49-201ENST00000247003 J3QL48 77 aa7.69□□□□□ -1.18
DDX49-201ENST00000247003 RBM12B-AS1Q9P1G2 102 aa7.68□□□□□ -1.18
DDX49-201ENST00000247003 H0YAA0 97 aa7.64□□□□□ -1.19
DDX49-201ENST00000247003 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
DDX49-201ENST00000247003 HERC1Q15751 4861 aa7.61□□□□□ -1.19
DDX49-201ENST00000247003 SEC61BP60468 96 aaKnown RBP7.6□□□□□ -1.19
DDX49-201ENST00000247003 LRP2P98164 4655 aa7.55□□□□□ -1.2
DDX49-201ENST00000247003 LPAP08519 4548 aa7.55□□□□□ -1.2
DDX49-201ENST00000247003 K7ERS5 55 aa7.52□□□□□ -1.21
DDX49-201ENST00000247003 KRTAP10-6P60371 365 aaPredicted RBP7.51□□□□□ -1.21
DDX49-201ENST00000247003 CSAG1Q6PB30 78 aa7.5□□□□□ -1.21
DDX49-201ENST00000247003 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.21
DDX49-201ENST00000247003 ADM2Q7Z4H4 148 aa7.44□□□□□ -1.22
DDX49-201ENST00000247003 UBR4Q5T4S7 5183 aa7.42□□□□□ -1.22
DDX49-201ENST00000247003 P0C880 135 aa7.41□□□□□ -1.22
DDX49-201ENST00000247003 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
DDX49-201ENST00000247003 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
DDX49-201ENST00000247003 A0A0D9SG42 100 aa7.36□□□□□ -1.23
DDX49-201ENST00000247003 HMCN2Q8NDA2 5059 aa7.35□□□□□ -1.23
DDX49-201ENST00000247003 MUC17Q685J3 4493 aa7.33□□□□□ -1.24
DDX49-201ENST00000247003 KRTAP4-1Q9BYQ7 146 aa7.3□□□□□ -1.24
DDX49-201ENST00000247003 M0QZ58 72 aa7.29□□□□□ -1.24
DDX49-201ENST00000247003 ROMO1P60602 79 aa7.2□□□□□ -1.26
DDX49-201ENST00000247003 R4GN34 69 aa7.17□□□□□ -1.26
DDX49-201ENST00000247003 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
DDX49-201ENST00000247003 KRTAP12-2P59991 146 aa7.15□□□□□ -1.27
DDX49-201ENST00000247003 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
DDX49-201ENST00000247003 KRTAP19-2Q3LHN2 52 aa7.13□□□□□ -1.27
DDX49-201ENST00000247003 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
DDX49-201ENST00000247003 LINC01554Q52M75 96 aa7.12□□□□□ -1.27
DDX49-201ENST00000247003 MUC2Q02817 5179 aa7.03□□□□□ -1.28
DDX49-201ENST00000247003 CRIPTQ9P021 101 aa7.01□□□□□ -1.29
DDX49-201ENST00000247003 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
DDX49-201ENST00000247003 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.3
DDX49-201ENST00000247003 RNF213Q63HN8 5207 aa6.95□□□□□ -1.3
DDX49-201ENST00000247003 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
DDX49-201ENST00000247003 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
DDX49-201ENST00000247003 M0R2T5 61 aa6.81□□□□□ -1.32
DDX49-201ENST00000247003 CAMK2N1Q7Z7J9 78 aa6.79□□□□□ -1.32
DDX49-201ENST00000247003 FAT4Q6V0I7 4981 aa6.73□□□□□ -1.33
DDX49-201ENST00000247003 MT1HP80294 61 aa6.72□□□□□ -1.33
DDX49-201ENST00000247003 KRTAP9-6A0A140TA67 174 aa6.67□□□□□ -1.34
DDX49-201ENST00000247003 KRTAP9-2Q9BYQ4 174 aa6.67□□□□□ -1.34
DDX49-201ENST00000247003 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
DDX49-201ENST00000247003 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
DDX49-201ENST00000247003 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
DDX49-201ENST00000247003 MT2AP02795 61 aa6.54□□□□□ -1.36
DDX49-201ENST00000247003 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
DDX49-201ENST00000247003 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
DDX49-201ENST00000247003 MT1FP04733 61 aa6.51□□□□□ -1.37
DDX49-201ENST00000247003 TNP1P09430 55 aa6.5□□□□□ -1.37
DDX49-201ENST00000247003 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
DDX49-201ENST00000247003 LCE2AQ5TA79 106 aaPredicted RBP6.47□□□□□ -1.37
DDX49-201ENST00000247003 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
DDX49-201ENST00000247003 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
DDX49-201ENST00000247003 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
DDX49-201ENST00000247003 H3BS24 57 aa6.27□□□□□ -1.41
DDX49-201ENST00000247003 MT1BP07438 61 aa6.24□□□□□ -1.41
DDX49-201ENST00000247003 KRTAP9-3Q9BYQ3 159 aa6.24□□□□□ -1.41
DDX49-201ENST00000247003 CRCT1Q9UGL9 99 aa6.18□□□□□ -1.42
DDX49-201ENST00000247003 FSIP2Q5CZC0 6907 aa6.17□□□□□ -1.42
DDX49-201ENST00000247003 KRTAP10-5P60370 271 aa6.14□□□□□ -1.43
DDX49-201ENST00000247003 MT1XP80297 61 aa6.13□□□□□ -1.43
DDX49-201ENST00000247003 NDUFAF8A1L188 74 aa6.12□□□□□ -1.43
DDX49-201ENST00000247003 PRO2289Q9P1D8 64 aa6.12□□□□□ -1.43
DDX49-201ENST00000247003 LCE3AQ5TA76 89 aa6.11□□□□□ -1.43
DDX49-201ENST00000247003 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
DDX49-201ENST00000247003 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
DDX49-201ENST00000247003 LUZP6Q538Z0 58 aa6.02□□□□□ -1.45
DDX49-201ENST00000247003 LCE2BO14633 110 aa6□□□□□ -1.45
DDX49-201ENST00000247003 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
DDX49-201ENST00000247003 KRTAP9-7A8MTY7 169 aa5.93□□□□□ -1.46
DDX49-201ENST00000247003 KRTAP10-7P60409 375 aaPredicted RBP5.93□□□□□ -1.46
DDX49-201ENST00000247003 USH2AO75445 5202 aa5.88□□□□□ -1.47
DDX49-201ENST00000247003 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
DDX49-201ENST00000247003 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
DDX49-201ENST00000247003 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.8□□□□□ -1.48
DDX49-201ENST00000247003 SSPOA2VEC9 5147 aa5.73□□□□□ -1.49
DDX49-201ENST00000247003 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
DDX49-201ENST00000247003 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.5
DDX49-201ENST00000247003 KRTAP4-8A0A0G2JLE6 195 aa5.58□□□□□ -1.52
DDX49-201ENST00000247003 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
DDX49-201ENST00000247003 KMT2DO14686 5537 aa5.55□□□□□ -1.52
DDX49-201ENST00000247003 A0A0A0MQY5 61 aa5.54□□□□□ -1.52
DDX49-201ENST00000247003 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
DDX49-201ENST00000247003 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
DDX49-201ENST00000247003 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.54
DDX49-201ENST00000247003 SYNE2Q8WXH0 6885 aaKnown RBP5.44□□□□□ -1.54
DDX49-201ENST00000247003 MACF1Q9UPN3 7388 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms