RNA–Protein interactions for RNA: ENST00000240159.8

RNF170-201, Transcript of ring finger protein 170, humanhuman

TSL 2

Gene RNF170, Length 2,023 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-201ENST00000240159 LINC01558Q9Y6Z2 57 aa11.5□□□□□ -0.57
RNF170-201ENST00000240159 HMCN2Q8NDA2 5059 aa11.47□□□□□ -0.57
RNF170-201ENST00000240159 MUC17Q685J3 4493 aa11.44□□□□□ -0.58
RNF170-201ENST00000240159 KRTAP4-1Q9BYQ7 146 aa11.43□□□□□ -0.58
RNF170-201ENST00000240159 RBM12B-AS1Q9P1G2 102 aa11.42□□□□□ -0.58
RNF170-201ENST00000240159 SPTSSBQ8NFR3 76 aa11.41□□□□□ -0.58
RNF170-201ENST00000240159 A6NED7 52 aa11.37□□□□□ -0.59
RNF170-201ENST00000240159 H1FX-AS1Q4G0G2 97 aa11.37□□□□□ -0.59
RNF170-201ENST00000240159 A8MU10 97 aa11.34□□□□□ -0.59
RNF170-201ENST00000240159 LCA10Q71F78 164 aa11.33□□□□□ -0.6
RNF170-201ENST00000240159 S4R3F8 94 aa11.31□□□□□ -0.6
RNF170-201ENST00000240159 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
RNF170-201ENST00000240159 A0A1B0GU69 56 aa11.28□□□□□ -0.6
RNF170-201ENST00000240159 CDC42SE1Q9NRR8 79 aa11.23□□□□□ -0.61
RNF170-201ENST00000240159 SEC61GP60059 68 aa11.15□□□□□ -0.62
RNF170-201ENST00000240159 KRTAP19-2Q3LHN2 52 aa11.14□□□□□ -0.63
RNF170-201ENST00000240159 PMAIP1Q13794 54 aa11.11□□□□□ -0.63
RNF170-201ENST00000240159 MUC2Q02817 5179 aa11.1□□□□□ -0.63
RNF170-201ENST00000240159 CSAG1Q6PB30 78 aa11.04□□□□□ -0.64
RNF170-201ENST00000240159 UQCR11O14957 56 aa10.95□□□□□ -0.66
RNF170-201ENST00000240159 A6NN06 94 aa10.94□□□□□ -0.66
RNF170-201ENST00000240159 KRTAP3-2Q9BYR7 98 aa10.94□□□□□ -0.66
RNF170-201ENST00000240159 UBR4Q5T4S7 5183 aa10.93□□□□□ -0.66
RNF170-201ENST00000240159 KRTAP10-6P60371 365 aaPredicted RBP10.92□□□□□ -0.66
RNF170-201ENST00000240159 A0A1B0GU33 70 aa10.9□□□□□ -0.66
RNF170-201ENST00000240159 SPATA8Q6RVD6 105 aa10.89□□□□□ -0.67
RNF170-201ENST00000240159 MIR22HGQ0VDD5 57 aa10.87□□□□□ -0.67
RNF170-201ENST00000240159 ADM2Q7Z4H4 148 aa10.85□□□□□ -0.67
RNF170-201ENST00000240159 RNF213Q63HN8 5207 aa10.85□□□□□ -0.67
RNF170-201ENST00000240159 KTN1-AS1Q86SY8 53 aa10.84□□□□□ -0.67
RNF170-201ENST00000240159 LCE2CQ5TA81 110 aa10.83□□□□□ -0.68
RNF170-201ENST00000240159 P0C880 135 aa10.82□□□□□ -0.68
RNF170-201ENST00000240159 FLGP20930 4061 aaPredicted RBP10.82□□□□□ -0.68
RNF170-201ENST00000240159 H0YAA0 97 aa10.8□□□□□ -0.68
RNF170-201ENST00000240159 KRTAP13-4Q3LI77 160 aa10.67□□□□□ -0.7
RNF170-201ENST00000240159 FAT4Q6V0I7 4981 aa10.64□□□□□ -0.71
RNF170-201ENST00000240159 MT1HP80294 61 aa10.59□□□□□ -0.71
RNF170-201ENST00000240159 M0QZ58 72 aa10.51□□□□□ -0.73
RNF170-201ENST00000240159 M0R2T5 61 aa10.49□□□□□ -0.73
RNF170-201ENST00000240159 LORP23490 312 aaPredicted RBP10.48□□□□□ -0.73
RNF170-201ENST00000240159 A0A0D9SG42 100 aa10.46□□□□□ -0.73
RNF170-201ENST00000240159 R4GN34 69 aa10.44□□□□□ -0.74
RNF170-201ENST00000240159 PRAC1Q96KF2 57 aa10.4□□□□□ -0.75
RNF170-201ENST00000240159 K7ERS5 55 aa10.3□□□□□ -0.76
RNF170-201ENST00000240159 LINC01554Q52M75 96 aa10.28□□□□□ -0.76
RNF170-201ENST00000240159 CRIPTQ9P021 101 aa10.28□□□□□ -0.76
RNF170-201ENST00000240159 KRTAP12-1P59990 96 aa10.24□□□□□ -0.77
RNF170-201ENST00000240159 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
RNF170-201ENST00000240159 KRTAP9-8Q9BYQ0 159 aa10.23□□□□□ -0.77
RNF170-201ENST00000240159 MT2AP02795 61 aa10.21□□□□□ -0.78
RNF170-201ENST00000240159 SPINT4Q6UDR6 99 aa10.2□□□□□ -0.78
RNF170-201ENST00000240159 MT1FP04733 61 aa10.16□□□□□ -0.78
RNF170-201ENST00000240159 KRTAP10-10P60014 251 aa10.12□□□□□ -0.79
RNF170-201ENST00000240159 LCE2AQ5TA79 106 aaPredicted RBP10.06□□□□□ -0.8
RNF170-201ENST00000240159 SPRR2GQ9BYE4 73 aa10.06□□□□□ -0.8
RNF170-201ENST00000240159 KRTAP19-1Q8IUB9 90 aa10.04□□□□□ -0.8
RNF170-201ENST00000240159 ROMO1P60602 79 aa9.93□□□□□ -0.82
RNF170-201ENST00000240159 KRTAP25-1Q3LHN0 102 aa9.92□□□□□ -0.82
RNF170-201ENST00000240159 KRTAP9-3Q9BYQ3 159 aa9.85□□□□□ -0.83
RNF170-201ENST00000240159 CAMK2N1Q7Z7J9 78 aa9.8□□□□□ -0.84
RNF170-201ENST00000240159 KRTAP19-8Q3LI54 63 aa9.77□□□□□ -0.85
RNF170-201ENST00000240159 PLAC4Q8WY50 150 aa9.75□□□□□ -0.85
RNF170-201ENST00000240159 C10orf95Q9H7T3 257 aa9.7□□□□□ -0.86
RNF170-201ENST00000240159 MT1BP07438 61 aa9.65□□□□□ -0.86
RNF170-201ENST00000240159 LCE2BO14633 110 aa9.56□□□□□ -0.88
RNF170-201ENST00000240159 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
RNF170-201ENST00000240159 MT1XP80297 61 aa9.37□□□□□ -0.91
RNF170-201ENST00000240159 KRTAP10-5P60370 271 aa9.36□□□□□ -0.91
RNF170-201ENST00000240159 TNP1P09430 55 aa9.34□□□□□ -0.91
RNF170-201ENST00000240159 USH2AO75445 5202 aa9.25□□□□□ -0.93
RNF170-201ENST00000240159 PRO2289Q9P1D8 64 aa9.21□□□□□ -0.94
RNF170-201ENST00000240159 PP632Q6XCG6 107 aa9.12□□□□□ -0.95
RNF170-201ENST00000240159 KRTAP23-1A1A580 65 aa9.07□□□□□ -0.96
RNF170-201ENST00000240159 KRTAP10-7P60409 375 aaPredicted RBP9.02□□□□□ -0.97
RNF170-201ENST00000240159 KRTAP15-1Q3LI76 137 aa8.97□□□□□ -0.97
RNF170-201ENST00000240159 LCE3AQ5TA76 89 aa8.95□□□□□ -0.98
RNF170-201ENST00000240159 SSPOA2VEC9 5147 aa8.94□□□□□ -0.98
RNF170-201ENST00000240159 KRTAP10-12P60413 245 aa8.92□□□□□ -0.98
RNF170-201ENST00000240159 KRTAP19-6Q3LI70 58 aa8.91□□□□□ -0.98
RNF170-201ENST00000240159 H3BS24 57 aa8.9□□□□□ -0.98
RNF170-201ENST00000240159 FSIP2Q5CZC0 6907 aa8.87□□□□□ -0.99
RNF170-201ENST00000240159 KRTAP8-1Q8IUC2 63 aa8.75□□□□□ -1.01
RNF170-201ENST00000240159 KRTAP9-2Q9BYQ4 174 aa8.64□□□□□ -1.03
RNF170-201ENST00000240159 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
RNF170-201ENST00000240159 NDUFAF8A1L188 74 aa8.63□□□□□ -1.03
RNF170-201ENST00000240159 KRTAP4-8Q9BYQ9 185 aa8.63□□□□□ -1.03
RNF170-201ENST00000240159 KRTAP12-3P60328 96 aa8.58□□□□□ -1.04
RNF170-201ENST00000240159 KMT2DO14686 5537 aa8.57□□□□□ -1.04
RNF170-201ENST00000240159 FCGBPQ9Y6R7 5405 aaPredicted RBP8.52□□□□□ -1.05
RNF170-201ENST00000240159 KRTAP19-5Q3LI72 72 aa8.5□□□□□ -1.05
RNF170-201ENST00000240159 A0A0A0MQY5 61 aa8.46□□□□□ -1.06
RNF170-201ENST00000240159 KRTAP19-7Q3SYF9 63 aa8.36□□□□□ -1.07
RNF170-201ENST00000240159 CRCT1Q9UGL9 99 aa8.36□□□□□ -1.07
RNF170-201ENST00000240159 LUZP6Q538Z0 58 aa8.28□□□□□ -1.08
RNF170-201ENST00000240159 MT1EP04732 61 aa8.19□□□□□ -1.1
RNF170-201ENST00000240159 SPRR5A0A1B0GTR4 108 aa8.19□□□□□ -1.1
RNF170-201ENST00000240159 MACF1Q9UPN3 7388 aaKnown RBP8.13□□□□□ -1.11
RNF170-201ENST00000240159 MT1LQ93083 61 aa8.05□□□□□ -1.12
RNF170-201ENST00000240159 LCE3CQ5T5A8 94 aa8.03□□□□□ -1.12
RNF170-201ENST00000240159 KRTAP19-4Q3LI73 84 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms