RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
EGR1-201ENST00000239938 MYCBP2O75592 4640 aa7.22□□□□□ -1.25
EGR1-201ENST00000239938 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
EGR1-201ENST00000239938 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
EGR1-201ENST00000239938 HSPG2P98160 4391 aa7.22□□□□□ -1.25
EGR1-201ENST00000239938 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
EGR1-201ENST00000239938 FAT3Q8TDW7 4589 aa7.2□□□□□ -1.26
EGR1-201ENST00000239938 K7ERS5 55 aa7.19□□□□□ -1.26
EGR1-201ENST00000239938 KRTAP3-2Q9BYR7 98 aa7.16□□□□□ -1.26
EGR1-201ENST00000239938 TNXBP22105 4242 aa7.16□□□□□ -1.26
EGR1-201ENST00000239938 LRP1Q07954 4544 aaKnown RBP7.15□□□□□ -1.27
EGR1-201ENST00000239938 TPRXLQ17RH7 258 aa7.14□□□□□ -1.27
EGR1-201ENST00000239938 SPINT4Q6UDR6 99 aa7.14□□□□□ -1.27
EGR1-201ENST00000239938 RYR2Q92736 4967 aa7.12□□□□□ -1.27
EGR1-201ENST00000239938 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
EGR1-201ENST00000239938 A0A1B0GVY2 172 aa7.11□□□□□ -1.27
EGR1-201ENST00000239938 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
EGR1-201ENST00000239938 EPPK1P58107 5090 aaKnown RBP7.05□□□□□ -1.28
EGR1-201ENST00000239938 S4R3F8 94 aa7□□□□□ -1.29
EGR1-201ENST00000239938 NDUFAF8A1L188 74 aa6.99□□□□□ -1.29
EGR1-201ENST00000239938 LPAP08519 4548 aa6.98□□□□□ -1.29
EGR1-201ENST00000239938 KRTAP12-2P59991 146 aa6.98□□□□□ -1.29
EGR1-201ENST00000239938 XP32Q5T750 250 aa6.97□□□□□ -1.29
EGR1-201ENST00000239938 Q5VSD8 79 aa6.89□□□□□ -1.31
EGR1-201ENST00000239938 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
EGR1-201ENST00000239938 KRTAP15-1Q3LI76 137 aa6.86□□□□□ -1.31
EGR1-201ENST00000239938 BIRC6Q9NR09 4857 aa6.85□□□□□ -1.31
EGR1-201ENST00000239938 KRTAP17-1Q9BYP8 105 aa6.82□□□□□ -1.32
EGR1-201ENST00000239938 LRP2P98164 4655 aa6.8□□□□□ -1.32
EGR1-201ENST00000239938 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
EGR1-201ENST00000239938 RYR1P21817 5038 aa6.74□□□□□ -1.33
EGR1-201ENST00000239938 MT1HL1P0DM35 61 aa6.7□□□□□ -1.34
EGR1-201ENST00000239938 M0QZ58 72 aa6.7□□□□□ -1.34
EGR1-201ENST00000239938 PCLOQ9Y6V0 5065 aa6.66□□□□□ -1.34
EGR1-201ENST00000239938 HERC2O95714 4834 aa6.62□□□□□ -1.35
EGR1-201ENST00000239938 ABCA13Q86UQ4 5058 aa6.61□□□□□ -1.35
EGR1-201ENST00000239938 A0A0A0MQY5 61 aa6.54□□□□□ -1.36
EGR1-201ENST00000239938 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
EGR1-201ENST00000239938 MUC17Q685J3 4493 aa6.51□□□□□ -1.37
EGR1-201ENST00000239938 R4GN34 69 aa6.5□□□□□ -1.37
EGR1-201ENST00000239938 KRTAP4-5Q9BYR2 181 aa6.47□□□□□ -1.37
EGR1-201ENST00000239938 PLAC4Q8WY50 150 aa6.44□□□□□ -1.38
EGR1-201ENST00000239938 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
EGR1-201ENST00000239938 MUC2Q02817 5179 aa6.33□□□□□ -1.4
EGR1-201ENST00000239938 J3QL48 77 aa6.32□□□□□ -1.4
EGR1-201ENST00000239938 HERC1Q15751 4861 aa6.32□□□□□ -1.4
EGR1-201ENST00000239938 KRTAP19-2Q3LHN2 52 aa6.3□□□□□ -1.4
EGR1-201ENST00000239938 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
EGR1-201ENST00000239938 CAMK2N1Q7Z7J9 78 aa6.25□□□□□ -1.41
EGR1-201ENST00000239938 SEC61BP60468 96 aaKnown RBP6.24□□□□□ -1.41
EGR1-201ENST00000239938 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
EGR1-201ENST00000239938 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
EGR1-201ENST00000239938 UBR4Q5T4S7 5183 aa6□□□□□ -1.45
EGR1-201ENST00000239938 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
EGR1-201ENST00000239938 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
EGR1-201ENST00000239938 TNP1P09430 55 aa5.98□□□□□ -1.45
EGR1-201ENST00000239938 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
EGR1-201ENST00000239938 KRTAP23-1A1A580 65 aa5.93□□□□□ -1.46
EGR1-201ENST00000239938 RNF213Q63HN8 5207 aa5.88□□□□□ -1.47
EGR1-201ENST00000239938 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
EGR1-201ENST00000239938 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
EGR1-201ENST00000239938 M0R2T5 61 aa5.79□□□□□ -1.48
EGR1-201ENST00000239938 SPRR2GQ9BYE4 73 aa5.79□□□□□ -1.48
EGR1-201ENST00000239938 LCE3AQ5TA76 89 aa5.73□□□□□ -1.49
EGR1-201ENST00000239938 MT1FP04733 61 aa5.59□□□□□ -1.51
EGR1-201ENST00000239938 MT1HP80294 61 aa5.59□□□□□ -1.52
EGR1-201ENST00000239938 KRTAP10-10P60014 251 aa5.57□□□□□ -1.52
EGR1-201ENST00000239938 MT2AP02795 61 aa5.56□□□□□ -1.52
EGR1-201ENST00000239938 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
EGR1-201ENST00000239938 KRTAP9-8Q9BYQ0 159 aa5.52□□□□□ -1.53
EGR1-201ENST00000239938 KRTAP10-5P60370 271 aa5.5□□□□□ -1.53
EGR1-201ENST00000239938 MT1XP80297 61 aa5.48□□□□□ -1.53
EGR1-201ENST00000239938 KRTAP19-8Q3LI54 63 aa5.48□□□□□ -1.53
EGR1-201ENST00000239938 MT1BP07438 61 aa5.46□□□□□ -1.54
EGR1-201ENST00000239938 PRO2289Q9P1D8 64 aa5.43□□□□□ -1.54
EGR1-201ENST00000239938 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
EGR1-201ENST00000239938 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
EGR1-201ENST00000239938 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
EGR1-201ENST00000239938 KMT2DO14686 5537 aa5.37□□□□□ -1.55
EGR1-201ENST00000239938 INE1O15225 51 aa5.32□□□□□ -1.56
EGR1-201ENST00000239938 USH2AO75445 5202 aa5.29□□□□□ -1.56
EGR1-201ENST00000239938 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
EGR1-201ENST00000239938 KRTAP9-3Q9BYQ3 159 aa5.26□□□□□ -1.57
EGR1-201ENST00000239938 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
EGR1-201ENST00000239938 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.58
EGR1-201ENST00000239938 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
EGR1-201ENST00000239938 LCE3CQ5T5A8 94 aa5.12□□□□□ -1.59
EGR1-201ENST00000239938 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
EGR1-201ENST00000239938 KRTAP9-6A8MVA2 160 aa5.06□□□□□ -1.6
EGR1-201ENST00000239938 LCE2BO14633 110 aa5.05□□□□□ -1.6
EGR1-201ENST00000239938 KRTAP4-8A0A0G2JLE6 195 aa5.02□□□□□ -1.61
EGR1-201ENST00000239938 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
EGR1-201ENST00000239938 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
EGR1-201ENST00000239938 KRTAP9-6A0A140TA67 174 aa4.9□□□□□ -1.63
EGR1-201ENST00000239938 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
EGR1-201ENST00000239938 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
EGR1-201ENST00000239938 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
EGR1-201ENST00000239938 KRTAP2-1Q9BYU5 128 aa4.89□□□□□ -1.63
EGR1-201ENST00000239938 CRCT1Q9UGL9 99 aa4.79□□□□□ -1.64
EGR1-201ENST00000239938 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms