RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 NUPR2A6NF83 97 aa4.21□□□□□ -1.74
SCG3-201ENST00000220478 COX6B2Q6YFQ2 88 aa4.2□□□□□ -1.74
SCG3-201ENST00000220478 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
SCG3-201ENST00000220478 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
SCG3-201ENST00000220478 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
SCG3-201ENST00000220478 KRTAP10-2P60368 255 aa4.15□□□□□ -1.74
SCG3-201ENST00000220478 KRTAP10-6P60371 365 aaPredicted RBP4.15□□□□□ -1.74
SCG3-201ENST00000220478 DNHD1Q96M86 4753 aa4.14□□□□□ -1.75
SCG3-201ENST00000220478 TNXBP22105 4242 aa4.14□□□□□ -1.75
SCG3-201ENST00000220478 R4GN34 69 aa4.13□□□□□ -1.75
SCG3-201ENST00000220478 HSPG2P98160 4391 aa4.13□□□□□ -1.75
SCG3-201ENST00000220478 SPINT4Q6UDR6 99 aa4.13□□□□□ -1.75
SCG3-201ENST00000220478 C10orf95Q9H7T3 257 aa4.13□□□□□ -1.75
SCG3-201ENST00000220478 LRP1Q07954 4544 aaKnown RBP4.11□□□□□ -1.75
SCG3-201ENST00000220478 MYCBP2O75592 4640 aa4.11□□□□□ -1.75
SCG3-201ENST00000220478 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
SCG3-201ENST00000220478 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
SCG3-201ENST00000220478 DYNC1H1Q14204 4646 aaKnown RBP4.06□□□□□ -1.76
SCG3-201ENST00000220478 FAT1Q14517 4588 aa4.06□□□□□ -1.76
SCG3-201ENST00000220478 RPL37P61927 97 aaKnown RBP4.05□□□□□ -1.76
SCG3-201ENST00000220478 PRO2289Q9P1D8 64 aa4.05□□□□□ -1.76
SCG3-201ENST00000220478 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
SCG3-201ENST00000220478 RPS29P62273 56 aaKnown RBP4.03□□□□□ -1.76
SCG3-201ENST00000220478 LPAP08519 4548 aa4.03□□□□□ -1.76
SCG3-201ENST00000220478 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
SCG3-201ENST00000220478 A0A0D9SG42 100 aa4□□□□□ -1.77
SCG3-201ENST00000220478 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
SCG3-201ENST00000220478 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
SCG3-201ENST00000220478 S4R3F8 94 aa3.98□□□□□ -1.77
SCG3-201ENST00000220478 XP32Q5T750 250 aa3.97□□□□□ -1.77
SCG3-201ENST00000220478 KRTAP10-8P60410 259 aa3.96□□□□□ -1.78
SCG3-201ENST00000220478 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
SCG3-201ENST00000220478 DMBT1Q9UGM3 2413 aaPredicted RBP3.94□□□□□ -1.78
SCG3-201ENST00000220478 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
SCG3-201ENST00000220478 KRTAP17-1Q9BYP8 105 aa3.89□□□□□ -1.79
SCG3-201ENST00000220478 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
SCG3-201ENST00000220478 KMT2CQ8NEZ4 4911 aaKnown RBP3.85□□□□□ -1.79
SCG3-201ENST00000220478 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.83□□□□□ -1.8
SCG3-201ENST00000220478 SMR3BP02814 79 aaPredicted RBP3.8□□□□□ -1.8
SCG3-201ENST00000220478 LRP2P98164 4655 aa3.79□□□□□ -1.8
SCG3-201ENST00000220478 BIRC6Q9NR09 4857 aa3.78□□□□□ -1.8
SCG3-201ENST00000220478 KRTAP9-2Q9BYQ4 174 aa3.77□□□□□ -1.81
SCG3-201ENST00000220478 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
SCG3-201ENST00000220478 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
SCG3-201ENST00000220478 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
SCG3-201ENST00000220478 M0QZ58 72 aa3.72□□□□□ -1.81
SCG3-201ENST00000220478 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
SCG3-201ENST00000220478 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
SCG3-201ENST00000220478 KRTAP4-8Q9BYQ9 185 aa3.72□□□□□ -1.81
SCG3-201ENST00000220478 RYR2Q92736 4967 aa3.72□□□□□ -1.81
SCG3-201ENST00000220478 A0A1B0GVY2 172 aa3.71□□□□□ -1.82
SCG3-201ENST00000220478 MUC17Q685J3 4493 aa3.71□□□□□ -1.82
SCG3-201ENST00000220478 KRTAP19-1Q8IUB9 90 aa3.7□□□□□ -1.82
SCG3-201ENST00000220478 RYR1P21817 5038 aa3.67□□□□□ -1.82
SCG3-201ENST00000220478 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
SCG3-201ENST00000220478 INE1O15225 51 aa3.65□□□□□ -1.82
SCG3-201ENST00000220478 ABCA13Q86UQ4 5058 aa3.63□□□□□ -1.83
SCG3-201ENST00000220478 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
SCG3-201ENST00000220478 RYR3Q15413 4870 aa3.61□□□□□ -1.83
SCG3-201ENST00000220478 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
SCG3-201ENST00000220478 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
SCG3-201ENST00000220478 HERC2O95714 4834 aa3.54□□□□□ -1.84
SCG3-201ENST00000220478 MT1HL1P0DM35 61 aa3.54□□□□□ -1.84
SCG3-201ENST00000220478 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
SCG3-201ENST00000220478 FLGP20930 4061 aaPredicted RBP3.53□□□□□ -1.84
SCG3-201ENST00000220478 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
SCG3-201ENST00000220478 EPPK1P58107 5090 aaKnown RBP3.5□□□□□ -1.85
SCG3-201ENST00000220478 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
SCG3-201ENST00000220478 KRTAP9-3Q9BYQ3 159 aa3.49□□□□□ -1.85
SCG3-201ENST00000220478 KIAA1109Q2LD37 5005 aa3.48□□□□□ -1.85
SCG3-201ENST00000220478 PCLOQ9Y6V0 5065 aa3.47□□□□□ -1.85
SCG3-201ENST00000220478 Q5VSD8 79 aa3.45□□□□□ -1.86
SCG3-201ENST00000220478 KRTAP4-1Q9BYQ7 146 aa3.45□□□□□ -1.86
SCG3-201ENST00000220478 MUC2Q02817 5179 aa3.43□□□□□ -1.86
SCG3-201ENST00000220478 HERC1Q15751 4861 aa3.39□□□□□ -1.87
SCG3-201ENST00000220478 KRTAP4-8A0A0G2JLE6 195 aa3.39□□□□□ -1.87
SCG3-201ENST00000220478 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
SCG3-201ENST00000220478 TNP1P09430 55 aa3.29□□□□□ -1.88
SCG3-201ENST00000220478 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
SCG3-201ENST00000220478 KRTAP4-5Q9BYR2 181 aa3.26□□□□□ -1.89
SCG3-201ENST00000220478 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
SCG3-201ENST00000220478 KRTAP4-7Q9BYR0 210 aa3.23□□□□□ -1.89
SCG3-201ENST00000220478 FAT4Q6V0I7 4981 aa3.22□□□□□ -1.89
SCG3-201ENST00000220478 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
SCG3-201ENST00000220478 UBR4Q5T4S7 5183 aa3.2□□□□□ -1.9
SCG3-201ENST00000220478 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
SCG3-201ENST00000220478 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
SCG3-201ENST00000220478 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
SCG3-201ENST00000220478 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
SCG3-201ENST00000220478 KRTAP8-1Q8IUC2 63 aa3.14□□□□□ -1.91
SCG3-201ENST00000220478 HMCN2Q8NDA2 5059 aa3.13□□□□□ -1.91
SCG3-201ENST00000220478 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
SCG3-201ENST00000220478 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
SCG3-201ENST00000220478 MT3P25713 68 aa3.05□□□□□ -1.92
SCG3-201ENST00000220478 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
SCG3-201ENST00000220478 KRTAP10-5P60370 271 aa3.04□□□□□ -1.92
SCG3-201ENST00000220478 MT1XP80297 61 aa3.02□□□□□ -1.93
SCG3-201ENST00000220478 KRTAP10-10P60014 251 aa3□□□□□ -1.93
SCG3-201ENST00000220478 KRTAP12-3P60328 96 aa3□□□□□ -1.93
SCG3-201ENST00000220478 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms