RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 KRTAP3-3Q9BYR6 98 aa4.94□□□□□ -1.62
MTHFD1-201ENST00000216605 KRTAP3-2Q9BYR7 98 aa4.94□□□□□ -1.62
MTHFD1-201ENST00000216605 Q8N1X5 172 aa4.92□□□□□ -1.62
MTHFD1-201ENST00000216605 RYR3Q15413 4870 aa4.92□□□□□ -1.62
MTHFD1-201ENST00000216605 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
MTHFD1-201ENST00000216605 KIAA1109Q2LD37 5005 aa4.86□□□□□ -1.63
MTHFD1-201ENST00000216605 KRTAP10-8P60410 259 aa4.86□□□□□ -1.63
MTHFD1-201ENST00000216605 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
MTHFD1-201ENST00000216605 KRTAP17-1Q9BYP8 105 aa4.83□□□□□ -1.64
MTHFD1-201ENST00000216605 RYR1P21817 5038 aa4.83□□□□□ -1.64
MTHFD1-201ENST00000216605 CRIPTQ9P021 101 aa4.83□□□□□ -1.64
MTHFD1-201ENST00000216605 HSPG2P98160 4391 aa4.82□□□□□ -1.64
MTHFD1-201ENST00000216605 LRP1Q07954 4544 aaKnown RBP4.82□□□□□ -1.64
MTHFD1-201ENST00000216605 LCE2DQ5TA82 110 aaPredicted RBP4.8□□□□□ -1.64
MTHFD1-201ENST00000216605 EPPK1P58107 5090 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-201ENST00000216605 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
MTHFD1-201ENST00000216605 MT1HL1P0DM35 61 aa4.75□□□□□ -1.65
MTHFD1-201ENST00000216605 PKHD1L1Q86WI1 4243 aa4.75□□□□□ -1.65
MTHFD1-201ENST00000216605 KRTAP4-5Q9BYR2 181 aa4.75□□□□□ -1.65
MTHFD1-201ENST00000216605 H0YAA0 97 aa4.73□□□□□ -1.65
MTHFD1-201ENST00000216605 MYCBP2O75592 4640 aa4.73□□□□□ -1.65
MTHFD1-201ENST00000216605 XP32Q5T750 250 aa4.71□□□□□ -1.66
MTHFD1-201ENST00000216605 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
MTHFD1-201ENST00000216605 TNXBP22105 4242 aa4.69□□□□□ -1.66
MTHFD1-201ENST00000216605 A0A1B0GU33 70 aa4.68□□□□□ -1.66
MTHFD1-201ENST00000216605 FAT3Q8TDW7 4589 aa4.67□□□□□ -1.66
MTHFD1-201ENST00000216605 TPRXLQ17RH7 258 aa4.64□□□□□ -1.67
MTHFD1-201ENST00000216605 H1FX-AS1Q4G0G2 97 aa4.64□□□□□ -1.67
MTHFD1-201ENST00000216605 COX6B2Q6YFQ2 88 aa4.62□□□□□ -1.67
MTHFD1-201ENST00000216605 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.67
MTHFD1-201ENST00000216605 LCE2CQ5TA81 110 aa4.59□□□□□ -1.67
MTHFD1-201ENST00000216605 ABCA13Q86UQ4 5058 aa4.55□□□□□ -1.68
MTHFD1-201ENST00000216605 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
MTHFD1-201ENST00000216605 C10orf95Q9H7T3 257 aa4.53□□□□□ -1.68
MTHFD1-201ENST00000216605 HERC2O95714 4834 aa4.53□□□□□ -1.68
MTHFD1-201ENST00000216605 S4R3F8 94 aa4.52□□□□□ -1.69
MTHFD1-201ENST00000216605 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
MTHFD1-201ENST00000216605 LRP2P98164 4655 aa4.5□□□□□ -1.69
MTHFD1-201ENST00000216605 LPAP08519 4548 aa4.49□□□□□ -1.69
MTHFD1-201ENST00000216605 R4GN34 69 aa4.43□□□□□ -1.7
MTHFD1-201ENST00000216605 A0A0D9SG42 100 aa4.41□□□□□ -1.7
MTHFD1-201ENST00000216605 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
MTHFD1-201ENST00000216605 LCE2BO14633 110 aa4.39□□□□□ -1.71
MTHFD1-201ENST00000216605 KRTAP13-4Q3LI77 160 aa4.37□□□□□ -1.71
MTHFD1-201ENST00000216605 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
MTHFD1-201ENST00000216605 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
MTHFD1-201ENST00000216605 PLAC4Q8WY50 150 aa4.35□□□□□ -1.71
MTHFD1-201ENST00000216605 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
MTHFD1-201ENST00000216605 HERC1Q15751 4861 aa4.31□□□□□ -1.72
MTHFD1-201ENST00000216605 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
MTHFD1-201ENST00000216605 MUC2Q02817 5179 aa4.25□□□□□ -1.73
MTHFD1-201ENST00000216605 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
MTHFD1-201ENST00000216605 M0QZ58 72 aa4.22□□□□□ -1.73
MTHFD1-201ENST00000216605 MUC17Q685J3 4493 aa4.2□□□□□ -1.74
MTHFD1-201ENST00000216605 M0R2T5 61 aa4.2□□□□□ -1.74
MTHFD1-201ENST00000216605 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
MTHFD1-201ENST00000216605 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
MTHFD1-201ENST00000216605 RNF213Q63HN8 5207 aa4.12□□□□□ -1.75
MTHFD1-201ENST00000216605 LORP23490 312 aaPredicted RBP4.12□□□□□ -1.75
MTHFD1-201ENST00000216605 UBR4Q5T4S7 5183 aa4.1□□□□□ -1.75
MTHFD1-201ENST00000216605 INE1O15225 51 aa4.08□□□□□ -1.76
MTHFD1-201ENST00000216605 FAT4Q6V0I7 4981 aa4.05□□□□□ -1.76
MTHFD1-201ENST00000216605 FLGP20930 4061 aaPredicted RBP4.04□□□□□ -1.76
MTHFD1-201ENST00000216605 MT1HP80294 61 aa4.01□□□□□ -1.77
MTHFD1-201ENST00000216605 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
MTHFD1-201ENST00000216605 PP632Q6XCG6 107 aa3.96□□□□□ -1.78
MTHFD1-201ENST00000216605 MT2AP02795 61 aa3.89□□□□□ -1.79
MTHFD1-201ENST00000216605 MT1FP04733 61 aa3.88□□□□□ -1.79
MTHFD1-201ENST00000216605 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
MTHFD1-201ENST00000216605 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
MTHFD1-201ENST00000216605 KRTAP19-1Q8IUB9 90 aa3.83□□□□□ -1.8
MTHFD1-201ENST00000216605 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
MTHFD1-201ENST00000216605 TNP1P09430 55 aa3.78□□□□□ -1.8
MTHFD1-201ENST00000216605 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
MTHFD1-201ENST00000216605 KRTAP19-8Q3LI54 63 aa3.68□□□□□ -1.82
MTHFD1-201ENST00000216605 MT1BP07438 61 aa3.67□□□□□ -1.82
MTHFD1-201ENST00000216605 MT1XP80297 61 aa3.59□□□□□ -1.83
MTHFD1-201ENST00000216605 KRTAP10-5P60370 271 aa3.59□□□□□ -1.84
MTHFD1-201ENST00000216605 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
MTHFD1-201ENST00000216605 USH2AO75445 5202 aa3.56□□□□□ -1.84
MTHFD1-201ENST00000216605 KRTAP10-12P60413 245 aa3.53□□□□□ -1.85
MTHFD1-201ENST00000216605 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
MTHFD1-201ENST00000216605 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
MTHFD1-201ENST00000216605 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
MTHFD1-201ENST00000216605 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
MTHFD1-201ENST00000216605 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
MTHFD1-201ENST00000216605 KMT2DO14686 5537 aa3.37□□□□□ -1.87
MTHFD1-201ENST00000216605 KRTAP4-8A0A0G2JLE6 195 aa3.37□□□□□ -1.87
MTHFD1-201ENST00000216605 KRTAP4-8Q9BYQ9 185 aa3.37□□□□□ -1.87
MTHFD1-201ENST00000216605 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
MTHFD1-201ENST00000216605 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.88
MTHFD1-201ENST00000216605 SSPOA2VEC9 5147 aa3.33□□□□□ -1.88
MTHFD1-201ENST00000216605 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
MTHFD1-201ENST00000216605 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
MTHFD1-201ENST00000216605 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
MTHFD1-201ENST00000216605 LCE1EQ5T753 118 aa3.22□□□□□ -1.89
MTHFD1-201ENST00000216605 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
MTHFD1-201ENST00000216605 KRTAP19-7Q3SYF9 63 aa3.19□□□□□ -1.9
MTHFD1-201ENST00000216605 FCGBPQ9Y6R7 5405 aaPredicted RBP3.19□□□□□ -1.9
MTHFD1-201ENST00000216605 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms