RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 ATP5EP56381 51 aaPredicted RBP8.29□□□□□ -1.08
POLR2E-201ENST00000215587 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
POLR2E-201ENST00000215587 ACYP2P14621 99 aa8.26□□□□□ -1.09
POLR2E-201ENST00000215587 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
POLR2E-201ENST00000215587 S4R3F8 94 aa8.19□□□□□ -1.1
POLR2E-201ENST00000215587 CHKB-CPT1BH3BT56 60 aa8.15□□□□□ -1.1
POLR2E-201ENST00000215587 COA5Q86WW8 74 aa8.14□□□□□ -1.11
POLR2E-201ENST00000215587 LCA10Q71F78 164 aa8.12□□□□□ -1.11
POLR2E-201ENST00000215587 KRTAP9-7A8MTY7 169 aa8.1□□□□□ -1.11
POLR2E-201ENST00000215587 MT1HP80294 61 aa8.08□□□□□ -1.12
POLR2E-201ENST00000215587 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
POLR2E-201ENST00000215587 M0R2T5 61 aa8.05□□□□□ -1.12
POLR2E-201ENST00000215587 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
POLR2E-201ENST00000215587 CSAG1Q6PB30 78 aa8.04□□□□□ -1.12
POLR2E-201ENST00000215587 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
POLR2E-201ENST00000215587 KRTAP9-1A8MXZ3 250 aaPredicted RBP8□□□□□ -1.13
POLR2E-201ENST00000215587 FLGP20930 4061 aaPredicted RBP7.98□□□□□ -1.13
POLR2E-201ENST00000215587 RPS28P62857 69 aaKnown RBP7.89□□□□□ -1.15
POLR2E-201ENST00000215587 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
POLR2E-201ENST00000215587 KRTAP10-6P60371 365 aaPredicted RBP7.85□□□□□ -1.15
POLR2E-201ENST00000215587 H0YAA0 97 aa7.83□□□□□ -1.16
POLR2E-201ENST00000215587 SMIM26A0A096LP01 95 aa7.8□□□□□ -1.16
POLR2E-201ENST00000215587 SEC61GP60059 68 aa7.78□□□□□ -1.16
POLR2E-201ENST00000215587 ADM2Q7Z4H4 148 aa7.78□□□□□ -1.16
POLR2E-201ENST00000215587 KRTAP9-8Q9BYQ0 159 aa7.73□□□□□ -1.17
POLR2E-201ENST00000215587 LINC01558Q9Y6Z2 57 aa7.73□□□□□ -1.17
POLR2E-201ENST00000215587 V9GYY9 64 aa7.73□□□□□ -1.17
POLR2E-201ENST00000215587 A0A1B0GU69 56 aa7.72□□□□□ -1.17
POLR2E-201ENST00000215587 MT2AP02795 61 aa7.71□□□□□ -1.18
POLR2E-201ENST00000215587 PRR15LQ9BU68 103 aa7.7□□□□□ -1.18
POLR2E-201ENST00000215587 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
POLR2E-201ENST00000215587 Q1T7F1 81 aa7.69□□□□□ -1.18
POLR2E-201ENST00000215587 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
POLR2E-201ENST00000215587 USH2AO75445 5202 aa7.69□□□□□ -1.18
POLR2E-201ENST00000215587 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
POLR2E-201ENST00000215587 P0C880 135 aa7.67□□□□□ -1.18
POLR2E-201ENST00000215587 MT1FP04733 61 aa7.65□□□□□ -1.18
POLR2E-201ENST00000215587 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
POLR2E-201ENST00000215587 SYNE2Q8WXH0 6885 aaKnown RBP7.62□□□□□ -1.19
POLR2E-201ENST00000215587 MACF1Q9UPN3 7388 aaKnown RBP7.59□□□□□ -1.19
POLR2E-201ENST00000215587 CRIPTQ9P021 101 aa7.59□□□□□ -1.19
POLR2E-201ENST00000215587 PSPHP1O15172 72 aa7.57□□□□□ -1.2
POLR2E-201ENST00000215587 A0A1B0GU33 70 aa7.55□□□□□ -1.2
POLR2E-201ENST00000215587 R4GN34 69 aa7.54□□□□□ -1.2
POLR2E-201ENST00000215587 M0QZ58 72 aa7.52□□□□□ -1.21
POLR2E-201ENST00000215587 Q5VV11 94 aa7.48□□□□□ -1.21
POLR2E-201ENST00000215587 KRTAP9-3Q9BYQ3 159 aa7.47□□□□□ -1.21
POLR2E-201ENST00000215587 UQCR11O14957 56 aa7.44□□□□□ -1.22
POLR2E-201ENST00000215587 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
POLR2E-201ENST00000215587 SPRR2GQ9BYE4 73 aa7.44□□□□□ -1.22
POLR2E-201ENST00000215587 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
POLR2E-201ENST00000215587 SPATA8Q6RVD6 105 aa7.4□□□□□ -1.22
POLR2E-201ENST00000215587 LINC01554Q52M75 96 aa7.38□□□□□ -1.23
POLR2E-201ENST00000215587 A6NED7 52 aa7.37□□□□□ -1.23
POLR2E-201ENST00000215587 MIR22HGQ0VDD5 57 aa7.33□□□□□ -1.24
POLR2E-201ENST00000215587 A0A0D9SG42 100 aa7.31□□□□□ -1.24
POLR2E-201ENST00000215587 LCE2BO14633 110 aa7.29□□□□□ -1.24
POLR2E-201ENST00000215587 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
POLR2E-201ENST00000215587 A8MU10 97 aa7.26□□□□□ -1.25
POLR2E-201ENST00000215587 KRTAP6-3Q3LI67 103 aa7.26□□□□□ -1.25
POLR2E-201ENST00000215587 NEBP20929 6669 aa7.25□□□□□ -1.25
POLR2E-201ENST00000215587 A6NN06 94 aa7.24□□□□□ -1.25
POLR2E-201ENST00000215587 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
POLR2E-201ENST00000215587 MT1BP07438 61 aa7.19□□□□□ -1.26
POLR2E-201ENST00000215587 CDC42SE1Q9NRR8 79 aa7.18□□□□□ -1.26
POLR2E-201ENST00000215587 SPINT4Q6UDR6 99 aa7.16□□□□□ -1.26
POLR2E-201ENST00000215587 KRTAP12-1P59990 96 aa7.15□□□□□ -1.26
POLR2E-201ENST00000215587 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
POLR2E-201ENST00000215587 K7ERS5 55 aa7.11□□□□□ -1.27
POLR2E-201ENST00000215587 KRTAP12-2P59991 146 aa7.1□□□□□ -1.27
POLR2E-201ENST00000215587 BRK1Q8WUW1 75 aa7.1□□□□□ -1.27
POLR2E-201ENST00000215587 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
POLR2E-201ENST00000215587 KRTAP20-1Q3LI63 56 aa7.04□□□□□ -1.28
POLR2E-201ENST00000215587 PRO0628Q9UI54 55 aa7.02□□□□□ -1.29
POLR2E-201ENST00000215587 MUC12Q9UKN1 5478 aa6.97□□□□□ -1.29
POLR2E-201ENST00000215587 PRO2289Q9P1D8 64 aa6.94□□□□□ -1.3
POLR2E-201ENST00000215587 KRTAP10-5P60370 271 aa6.9□□□□□ -1.3
POLR2E-201ENST00000215587 MT1XP80297 61 aa6.9□□□□□ -1.3
POLR2E-201ENST00000215587 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
POLR2E-201ENST00000215587 MDN1Q9NU22 5596 aa6.73□□□□□ -1.33
POLR2E-201ENST00000215587 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
POLR2E-201ENST00000215587 ROMO1P60602 79 aa6.72□□□□□ -1.33
POLR2E-201ENST00000215587 SVIPQ8NHG7 77 aa6.72□□□□□ -1.33
POLR2E-201ENST00000215587 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
POLR2E-201ENST00000215587 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
POLR2E-201ENST00000215587 KMT2DO14686 5537 aa6.67□□□□□ -1.34
POLR2E-201ENST00000215587 TNP1P09430 55 aa6.66□□□□□ -1.34
POLR2E-201ENST00000215587 KRTAP5-9P26371 169 aa6.64□□□□□ -1.35
POLR2E-201ENST00000215587 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
POLR2E-201ENST00000215587 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
POLR2E-201ENST00000215587 KRTAP10-12P60413 245 aa6.55□□□□□ -1.36
POLR2E-201ENST00000215587 KTN1-AS1Q86SY8 53 aa6.49□□□□□ -1.37
POLR2E-201ENST00000215587 GPR98Q8WXG9 6306 aa6.43□□□□□ -1.38
POLR2E-201ENST00000215587 KRTAP2-2Q9BYT5 123 aa6.42□□□□□ -1.38
POLR2E-201ENST00000215587 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
POLR2E-201ENST00000215587 LCE3AQ5TA76 89 aa6.39□□□□□ -1.39
POLR2E-201ENST00000215587 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
POLR2E-201ENST00000215587 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
POLR2E-201ENST00000215587 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
POLR2E-201ENST00000215587 KRTAP8-1Q8IUC2 63 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms