RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 RPL37P61927 97 aaKnown RBP6.4□□□□□ -1.38
CHPF2-201ENST00000035307 XP32Q5T750 250 aa6.39□□□□□ -1.39
CHPF2-201ENST00000035307 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
CHPF2-201ENST00000035307 RPS29P62273 56 aaKnown RBP6.39□□□□□ -1.39
CHPF2-201ENST00000035307 CAMK2N1Q7Z7J9 78 aa6.39□□□□□ -1.39
CHPF2-201ENST00000035307 M0R2T5 61 aa6.38□□□□□ -1.39
CHPF2-201ENST00000035307 C20orf166-AS1Q96NR2 134 aa6.38□□□□□ -1.39
CHPF2-201ENST00000035307 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
CHPF2-201ENST00000035307 M0QZ58 72 aa6.38□□□□□ -1.39
CHPF2-201ENST00000035307 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
CHPF2-201ENST00000035307 KRTAP10-4P60372 401 aaPredicted RBP6.37□□□□□ -1.39
CHPF2-201ENST00000035307 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.39
CHPF2-201ENST00000035307 RYR2Q92736 4967 aa6.34□□□□□ -1.4
CHPF2-201ENST00000035307 KRTAP17-1Q9BYP8 105 aa6.31□□□□□ -1.4
CHPF2-201ENST00000035307 ROMO1P60602 79 aa6.28□□□□□ -1.4
CHPF2-201ENST00000035307 MT1HL1P0DM35 61 aa6.28□□□□□ -1.4
CHPF2-201ENST00000035307 H0YAA0 97 aa6.27□□□□□ -1.41
CHPF2-201ENST00000035307 FAT2Q9NYQ8 4349 aa6.26□□□□□ -1.41
CHPF2-201ENST00000035307 EPPK1P58107 5090 aaKnown RBP6.22□□□□□ -1.41
CHPF2-201ENST00000035307 P0C880 135 aa6.2□□□□□ -1.42
CHPF2-201ENST00000035307 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
CHPF2-201ENST00000035307 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
CHPF2-201ENST00000035307 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
CHPF2-201ENST00000035307 PKD1P98161 4303 aa6.15□□□□□ -1.42
CHPF2-201ENST00000035307 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
CHPF2-201ENST00000035307 HERC2O95714 4834 aa6.1□□□□□ -1.43
CHPF2-201ENST00000035307 LRP2P98164 4655 aa6.06□□□□□ -1.44
CHPF2-201ENST00000035307 HSPG2P98160 4391 aa6.05□□□□□ -1.44
CHPF2-201ENST00000035307 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
CHPF2-201ENST00000035307 ABCA13Q86UQ4 5058 aa5.94□□□□□ -1.46
CHPF2-201ENST00000035307 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
CHPF2-201ENST00000035307 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
CHPF2-201ENST00000035307 LPAP08519 4548 aa5.92□□□□□ -1.46
CHPF2-201ENST00000035307 KRTAP12-2P59991 146 aa5.91□□□□□ -1.46
CHPF2-201ENST00000035307 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
CHPF2-201ENST00000035307 KRTAP10-6P60371 365 aaPredicted RBP5.85□□□□□ -1.47
CHPF2-201ENST00000035307 BIRC6Q9NR09 4857 aa5.83□□□□□ -1.48
CHPF2-201ENST00000035307 HERC1Q15751 4861 aa5.83□□□□□ -1.48
CHPF2-201ENST00000035307 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
CHPF2-201ENST00000035307 KRTAP3-3Q9BYR6 98 aa5.79□□□□□ -1.48
CHPF2-201ENST00000035307 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
CHPF2-201ENST00000035307 MUC2Q02817 5179 aa5.77□□□□□ -1.49
CHPF2-201ENST00000035307 PCLOQ9Y6V0 5065 aa5.77□□□□□ -1.49
CHPF2-201ENST00000035307 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
CHPF2-201ENST00000035307 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
CHPF2-201ENST00000035307 PKHD1L1Q86WI1 4243 aa5.76□□□□□ -1.49
CHPF2-201ENST00000035307 KRTAP3-2Q9BYR7 98 aa5.72□□□□□ -1.49
CHPF2-201ENST00000035307 TNP1P09430 55 aa5.71□□□□□ -1.49
CHPF2-201ENST00000035307 TNXBP22105 4242 aa5.64□□□□□ -1.51
CHPF2-201ENST00000035307 UBR4Q5T4S7 5183 aa5.63□□□□□ -1.51
CHPF2-201ENST00000035307 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
CHPF2-201ENST00000035307 A0A0A0MQY5 61 aa5.56□□□□□ -1.52
CHPF2-201ENST00000035307 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
CHPF2-201ENST00000035307 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
CHPF2-201ENST00000035307 FSIP2Q5CZC0 6907 aa5.5□□□□□ -1.53
CHPF2-201ENST00000035307 PP632Q6XCG6 107 aa5.44□□□□□ -1.54
CHPF2-201ENST00000035307 MT1HP80294 61 aa5.34□□□□□ -1.55
CHPF2-201ENST00000035307 HMCN2Q8NDA2 5059 aa5.32□□□□□ -1.56
CHPF2-201ENST00000035307 MT1FP04733 61 aa5.21□□□□□ -1.58
CHPF2-201ENST00000035307 MT2AP02795 61 aa5.21□□□□□ -1.58
CHPF2-201ENST00000035307 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
CHPF2-201ENST00000035307 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
CHPF2-201ENST00000035307 KRTAP19-2Q3LHN2 52 aa5.12□□□□□ -1.59
CHPF2-201ENST00000035307 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
CHPF2-201ENST00000035307 FLGP20930 4061 aaPredicted RBP5.07□□□□□ -1.6
CHPF2-201ENST00000035307 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
CHPF2-201ENST00000035307 USH2AO75445 5202 aa5.02□□□□□ -1.61
CHPF2-201ENST00000035307 KRTAP19-1Q8IUB9 90 aa5□□□□□ -1.61
CHPF2-201ENST00000035307 KRTAP10-12P60413 245 aa5□□□□□ -1.61
CHPF2-201ENST00000035307 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
CHPF2-201ENST00000035307 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
CHPF2-201ENST00000035307 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
CHPF2-201ENST00000035307 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
CHPF2-201ENST00000035307 MT1BP07438 61 aa4.8□□□□□ -1.64
CHPF2-201ENST00000035307 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
CHPF2-201ENST00000035307 LCE2BO14633 110 aa4.78□□□□□ -1.64
CHPF2-201ENST00000035307 KRTAP10-7P60409 375 aaPredicted RBP4.75□□□□□ -1.65
CHPF2-201ENST00000035307 KMT2DO14686 5537 aa4.72□□□□□ -1.65
CHPF2-201ENST00000035307 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
CHPF2-201ENST00000035307 KRTAP4-8Q9BYQ9 185 aa4.71□□□□□ -1.66
CHPF2-201ENST00000035307 MT1XP80297 61 aa4.7□□□□□ -1.66
CHPF2-201ENST00000035307 KRTAP19-8Q3LI54 63 aa4.68□□□□□ -1.66
CHPF2-201ENST00000035307 LCE2AQ5TA79 106 aaPredicted RBP4.68□□□□□ -1.66
CHPF2-201ENST00000035307 KRTAP10-5P60370 271 aa4.67□□□□□ -1.66
CHPF2-201ENST00000035307 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
CHPF2-201ENST00000035307 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.66
CHPF2-201ENST00000035307 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
CHPF2-201ENST00000035307 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
CHPF2-201ENST00000035307 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
CHPF2-201ENST00000035307 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
CHPF2-201ENST00000035307 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
CHPF2-201ENST00000035307 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
CHPF2-201ENST00000035307 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
CHPF2-201ENST00000035307 FCGBPQ9Y6R7 5405 aaPredicted RBP4.42□□□□□ -1.7
CHPF2-201ENST00000035307 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
CHPF2-201ENST00000035307 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
CHPF2-201ENST00000035307 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
CHPF2-201ENST00000035307 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
CHPF2-201ENST00000035307 MUC12Q9UKN1 5478 aa4.37□□□□□ -1.71
CHPF2-201ENST00000035307 INE1O15225 51 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms