RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Zfp248Q640N4 576 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Kcnip4Q6PHZ8 250 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Mpv17lQ99MS3 194 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Mcrip2Q9CQB2 160 aaKnown RBP6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Pdzd11Q9CZG9 140 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Znf580Q9DB38 172 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Vmn1r63Q9EPT1 300 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm9964E9Q9S5 144 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gp9O88186 177 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ighv1-62-3P01754 117 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Timm8bP62077 83 aaKnown RBP6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Spink11Q09TK7 88 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm5464Q3UY29 175 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Trdv2-2Q5R1A4 116 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Duxbl2Q7TNE6 350 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr403Q7TRX2 313 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Odf3l1Q810P2 275 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm10118Q8C8J5 116 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Nrn1Q8CFV4 142 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tm2d1Q99MB3 208 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 GlmpQ9JHJ3 404 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Cbln1Q9R171 193 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 AplnrQ9WV08 377 aa6.6□□□□□ -1.35
Trim39-201ENSMUST00000042717 Cldn34c4A2ANA3 212 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 S100a10P08207 97 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 Smrp1Q2MH31 260 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm5941Q497P9 117 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 Megf10Q6DIB5 1147 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 6030452D12RikQ8CD33 222 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ighv14-1A0A075B5R4 117 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 Gm5878E9PUB3 99 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 RfxapQ8VCG9 231 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 Atg101Q9D8Z6 218 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tmem89Q9DA04 169 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 Hivep1Q03172 2688 aa6.59□□□□□ -1.35
Trim39-201ENSMUST00000042717 Nsd1O88491 2588 aaKnown RBP6.59□□□□□ -1.36
Trim39-201ENSMUST00000042717 A0A1Y7VMQ4 148 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Tmem238A9JSM3 176 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Foxi3E0CZH3 425 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 AponG3X9D6 251 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Bri3P28662 125 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Prss3Q792Z0 246 aaKnown RBP6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr1380Q7TQT5 311 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Fbxl15Q91W61 300 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Shisal2bQ9D1Y9 158 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr1293-psA0A1L1SVB5 326 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm2564F6Z9S8 108 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ccl19O70460 108 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 PigyP0C1P0 71 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Rnf183Q8QZS5 190 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 AY761184Q9D848 116 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ighv2-7A0A075B5Q8 116 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Tcrg-C2A0A075B5Z2 167 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Trav9-2A0A075B647 113 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Trav7-4A0A075B6C1 113 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Trav9-4A0A0B4J1K2 113 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm15056F6ZR08 88 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 P01853 167 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Trav7d-4Q5R1H9 113 aa6.58□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ighv1-53A0A075B5W3 117 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Tcrg-V6A0A075B5Y8 134 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Tmem141A2AJB2 108 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm21834J3QN05 151 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Tdgf1P51865 171 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ang6Q5GAN0 147 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr1381Q7TQT4 311 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Wfdc15aQ8BH89 80 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm5468Q8C3D3 155 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 AhspQ9CY02 102 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ms4a12A0A087WSB9 263 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr218E9PWV2 313 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ren1P06281 402 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Adam8Q05910 826 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 OstcQ78XF5 149 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Immp2lQ8BPT6 175 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Klk15Q8CGR4 254 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Vmn1r70Q8R254 298 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr481Q8VGI5 312 aa6.57□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm4565A0A140LJ87 301 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm10203F6QJ09 66 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 A930009A15RikG3UYI6 118 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm6176J3QK59 301 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Fxyd7P59648 80 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Tpt1P63028 172 aaKnown RBP6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 AsipQ03288 131 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Znf48Q3US17 591 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Gm4567Q3UTA8 301 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ndufv3Q8BK30 104 aaKnown RBP6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Muc15Q8C6Z1 331 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Hyls1Q9CXX0 307 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Nat6Q9R123 314 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ighv1-12A0A0A6YXJ9 117 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Rtl10D3YWW5 146 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Lgals1P16045 135 aaKnown RBP6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Pfn1P62962 140 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 AW146154Q3TPQ7 468 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 H1fxQ80ZM5 188 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Olfr1339Q8VGB1 315 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Nit2Q9JHW2 276 aa6.56□□□□□ -1.36
Trim39-201ENSMUST00000042717 Ighv1-9A0A0A6YW37 117 aa6.56□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 99.3 ms