RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Cox6b1P56391 86 aaKnown RBP18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 BC048502Q80Y74 154 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Mustn1Q99JI1 82 aa18.53■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 P01789 122 aa18.52■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Igll1P20764 209 aa18.52■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Cox6a1P43024 111 aa18.52■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Ighv1-39A0A075B5V5 117 aa18.52■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Igkv8-24A0A140T8P5 121 aa18.52■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Hrct1Q9D6B9 109 aa18.52■□□□□ 0.56
Sh3rf1-201ENSMUST00000034060 Foxl2O88470 375 aa18.52■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Ca1P13634 261 aa18.52■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Gm17677B3GLJ5 116 aa18.51■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Gm11733Q8BQP1 125 aa18.51■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Klhdc3Q8VEM9 382 aa18.51■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Pip4p2Q9CZX7 257 aa18.51■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Spta1P08032 2415 aa18.51■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 AmelxP63277 210 aa18.5■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Sdhaf1Q3U276 118 aa18.5■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 LitafQ9JLJ0 161 aa18.5■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Tcf15Q60756 195 aa18.5■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Ndufa11Q9D8B4 141 aa18.5■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Rpl32P62911 135 aaKnown RBP18.5■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Minos1Q7TNS2 76 aa18.5■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Cacna1bO55017 2327 aa18.49■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Znf740Q6NZQ6 180 aa18.49■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Tpsg1Q9QUL7 311 aa18.49■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 B230307C23RikQ8BLB2 64 aa18.49■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Itgb4A2A863 1818 aa18.49■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Sap30O88574 220 aa18.48■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Olfr312Q7TRZ9 308 aa18.48■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Ss18l2Q9D174 77 aa18.48■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Bex1Q9R224 128 aa18.48■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Tcl1b4P56844 120 aa18.48■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Fam110aQ8R184 296 aa18.48■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Morn5Q9DAI9 170 aa18.48■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Vmo1Q5SXG7 201 aa18.47■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Phf3B2RQG2 2025 aaKnown RBP18.47■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Igkv5-37A0A140T8N4 115 aa18.47■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 P01802 115 aa18.47■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Gatd1Q8BFQ8 220 aa18.46■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Lrrk1Q3UHC2 2014 aa18.46■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 P04945 108 aa18.46■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 CtsgP28293 261 aa18.46■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Trav12d-3A0A075B6A4 115 aa18.46■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Ube2e1P52482 193 aa18.46■□□□□ 0.55
Sh3rf1-201ENSMUST00000034060 Cd59aO55186 123 aa18.46■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Lect2O88803 151 aa18.45■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Gm9747Q810H1 104 aa18.45■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Defa21Q8C1P2 93 aa18.45■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 StrcQ8VIM6 1809 aa18.45■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Exph5Q0VAV2 1960 aa18.45■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Thsd7bQ6P4U0 1607 aa18.45■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Gm20499D3Z4G5 72 aa18.45■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Loxhd1C8YR32 2068 aa18.45■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Tmem258P61166 79 aa18.44■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Olfr313Q5NC55 308 aa18.44■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 P01793 123 aa18.44■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Plscr4P58196 326 aa18.44■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Dmrtc1c1Q9D410 238 aa18.44■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Wfdc2Q9DAU7 174 aa18.44■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Ly6c1P0CW02 131 aa18.43■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Ang2Q64438 145 aa18.43■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 CtsbP10605 339 aa18.43■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Cysrt1Q9D1E4 142 aa18.43■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Col11a1Q61245 1804 aa18.43■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Ighv6-7A0A0A6YWU3 119 aa18.43■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 PtprdQ64487 1912 aa18.43■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Igkv4-68A0A0B4J1I7 117 aa18.43■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Il22ra2Q80XF5 230 aa18.43■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Tnfrsf13bQ9ET35 249 aa18.42■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Trav14d-3-dv8A0A075B619 120 aa18.42■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Gm2564F6Z9S8 108 aa18.42■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Ccl19O70460 108 aa18.42■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Ighv3-6P18531 116 aa18.42■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Fam241bQ9D882 120 aa18.42■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 LctF8VPT3 1931 aa18.42■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Runx1Q03347 451 aa18.41■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Znrd1Q791N7 123 aa18.41■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 4930447F04RikA2AFR2 126 aa18.41■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 NpsP0C0P8 89 aa18.41■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Ighv5-9-1A0A0A6YVS4 126 aa18.41■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Gm9936Q8C864 160 aa18.41■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Edn1P22387 202 aa18.4■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Gm10192Q3V0S1 108 aa18.4■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Ighv8-8A0A0A6YXQ0 119 aa18.4■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Igkv3-9A0A140T8P4 119 aa18.4■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Cabin1G3X8Q1 2187 aaKnown RBP18.4■□□□□ 0.54
Sh3rf1-201ENSMUST00000034060 Igkv3-1A0A075B5P1 119 aa18.39■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Fam216bQ8CC14 138 aa18.39■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Rspo1Q9Z132 265 aa18.39■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Lyg1Q9D7Q0 197 aa18.38■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Cox17P56394 63 aa18.38■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Q8R092 253 aa18.37■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Dock8Q8C147 2100 aa18.37■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Ube2e2Q91W82 201 aa18.37■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 P01794 123 aa18.37■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Gm10638F6QEG2 257 aa18.36■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Prr3Q811B5 190 aaKnown RBP18.36■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Hoxd3P09027 433 aa18.36■□□□□ 0.53
Sh3rf1-201ENSMUST00000034060 Gata4Q08369 441 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 141.4 ms