RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SPAG11AQ6PDA7 123 aa9.99□□□□□ -0.81
PHGDH-232ENST00000641947 A0A1B0GVX0 72 aa9.98□□□□□ -0.81
PHGDH-232ENST00000641947 HCG22E2RYF7 251 aa9.98□□□□□ -0.81
PHGDH-232ENST00000641947 ATOX1O00244 68 aa9.98□□□□□ -0.81
PHGDH-232ENST00000641947 RPS29P62273 56 aaKnown RBP9.98□□□□□ -0.81
PHGDH-232ENST00000641947 SVIPQ8NHG7 77 aa9.97□□□□□ -0.81
PHGDH-232ENST00000641947 MMP24-AS1A0A0U1RRL7 71 aa9.96□□□□□ -0.81
PHGDH-232ENST00000641947 NOTCH2NLQ7Z3S9 236 aa9.96□□□□□ -0.81
PHGDH-232ENST00000641947 WFDC13Q8IUB5 93 aa9.96□□□□□ -0.81
PHGDH-232ENST00000641947 IGHV6-1A0A0B4J1U7 121 aa9.96□□□□□ -0.82
PHGDH-232ENST00000641947 NDUFB1O75438 58 aa9.96□□□□□ -0.82
PHGDH-232ENST00000641947 KRTAP29-1A8MX34 341 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-232ENST00000641947 MT1HL1P0DM35 61 aa9.92□□□□□ -0.82
PHGDH-232ENST00000641947 C8orf17Q9NRJ1 99 aa9.92□□□□□ -0.82
PHGDH-232ENST00000641947 CASC2Q6XLA1 102 aa9.9□□□□□ -0.82
PHGDH-232ENST00000641947 OCR1Q9BZK8 76 aa9.88□□□□□ -0.83
PHGDH-232ENST00000641947 SERP2Q8N6R1 65 aa9.87□□□□□ -0.83
PHGDH-232ENST00000641947 hDV103S1A0JD37 113 aa9.86□□□□□ -0.83
PHGDH-232ENST00000641947 CCDC179H3BU77 68 aa9.86□□□□□ -0.83
PHGDH-232ENST00000641947 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
PHGDH-232ENST00000641947 DMBT1Q9UGM3 2413 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-232ENST00000641947 TRAV7A0A075B6U4 112 aa9.84□□□□□ -0.83
PHGDH-232ENST00000641947 COX7CP15954 63 aa9.84□□□□□ -0.83
PHGDH-232ENST00000641947 SMIM20Q8N5G0 67 aa9.81□□□□□ -0.84
PHGDH-232ENST00000641947 C8orf87E5RJ46 101 aa9.8□□□□□ -0.84
PHGDH-232ENST00000641947 LINC00313P59037 77 aa9.79□□□□□ -0.84
PHGDH-232ENST00000641947 TMEM254Q8TBM7 123 aa9.79□□□□□ -0.84
PHGDH-232ENST00000641947 UQCRQO14949 82 aa9.78□□□□□ -0.84
PHGDH-232ENST00000641947 MRPL34Q9BQ48 92 aaKnown RBP9.78□□□□□ -0.84
PHGDH-232ENST00000641947 KRTAP16-1A8MUX0 517 aa9.78□□□□□ -0.84
PHGDH-232ENST00000641947 OXTP01178 125 aa9.78□□□□□ -0.84
PHGDH-232ENST00000641947 CYSTM1Q9H1C7 97 aa9.73□□□□□ -0.85
PHGDH-232ENST00000641947 C20orf197Q8N268 126 aa9.7□□□□□ -0.86
PHGDH-232ENST00000641947 NDUFS5O43920 106 aa9.7□□□□□ -0.86
PHGDH-232ENST00000641947 C9orf92A6NGG3 77 aa9.68□□□□□ -0.86
PHGDH-232ENST00000641947 Q8N9P0 234 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-232ENST00000641947 SNURFQ9Y675 71 aa9.67□□□□□ -0.86
PHGDH-232ENST00000641947 PCLOQ9Y6V0 5065 aa9.67□□□□□ -0.86
PHGDH-232ENST00000641947 A0A0U1RQV1 116 aa9.64□□□□□ -0.87
PHGDH-232ENST00000641947 TP53AIP1Q9HCN2 124 aa9.64□□□□□ -0.87
PHGDH-232ENST00000641947 C5orf47Q569G3 176 aa9.63□□□□□ -0.87
PHGDH-232ENST00000641947 KLKP1Q107X0 134 aa9.63□□□□□ -0.87
PHGDH-232ENST00000641947 Q5W150 140 aa9.63□□□□□ -0.87
PHGDH-232ENST00000641947 H0Y9P7 68 aa9.62□□□□□ -0.87
PHGDH-232ENST00000641947 FP248Q71RG6 208 aaPredicted RBP9.62□□□□□ -0.87
PHGDH-232ENST00000641947 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
PHGDH-232ENST00000641947 TRAV22A0A0B4J277 110 aa9.6□□□□□ -0.87
PHGDH-232ENST00000641947 ZCCHC13Q8WW36 166 aaKnown RBP9.59□□□□□ -0.87
PHGDH-232ENST00000641947 IGLV7-46A0A075B6I9 117 aa9.58□□□□□ -0.88
PHGDH-232ENST00000641947 LINC00208Q96KT6 92 aa9.56□□□□□ -0.88
PHGDH-232ENST00000641947 MP68P56378 58 aa9.55□□□□□ -0.88
PHGDH-232ENST00000641947 C20orf166-AS1Q96NR2 134 aa9.55□□□□□ -0.88
PHGDH-232ENST00000641947 LPAP08519 4548 aa9.54□□□□□ -0.88
PHGDH-232ENST00000641947 A8MUU9 505 aa9.54□□□□□ -0.88
PHGDH-232ENST00000641947 H7BZZ5 65 aa9.53□□□□□ -0.88
PHGDH-232ENST00000641947 J3QL48 77 aa9.53□□□□□ -0.88
PHGDH-232ENST00000641947 RPS28P62857 69 aaKnown RBP9.53□□□□□ -0.88
PHGDH-232ENST00000641947 PRR4Q16378 134 aa9.52□□□□□ -0.88
PHGDH-232ENST00000641947 C1orf64Q8NEQ6 169 aa9.51□□□□□ -0.89
PHGDH-232ENST00000641947 H3BPC8 53 aa9.49□□□□□ -0.89
PHGDH-232ENST00000641947 LRP2P98164 4655 aa9.47□□□□□ -0.89
PHGDH-232ENST00000641947 TMEM258P61165 79 aa9.46□□□□□ -0.9
PHGDH-232ENST00000641947 XP32Q5T750 250 aa9.46□□□□□ -0.9
PHGDH-232ENST00000641947 HERC1Q15751 4861 aa9.46□□□□□ -0.9
PHGDH-232ENST00000641947 Q75L30 129 aa9.45□□□□□ -0.9
PHGDH-232ENST00000641947 NDUFC1O43677 76 aa9.43□□□□□ -0.9
PHGDH-232ENST00000641947 LOC101927531A0A1B0GV80 90 aa9.4□□□□□ -0.9
PHGDH-232ENST00000641947 TPRXLQ17RH7 258 aa9.4□□□□□ -0.9
PHGDH-232ENST00000641947 IGKV2-30P06310 120 aa9.39□□□□□ -0.91
PHGDH-232ENST00000641947 PCOTHQ58A44 107 aa9.39□□□□□ -0.91
PHGDH-232ENST00000641947 CYP4F30PQ9H0H9 118 aa9.39□□□□□ -0.91
PHGDH-232ENST00000641947 RPL37P61927 97 aaKnown RBP9.37□□□□□ -0.91
PHGDH-232ENST00000641947 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
PHGDH-232ENST00000641947 FAM236DA0A1B0GTK5 79 aa9.33□□□□□ -0.92
PHGDH-232ENST00000641947 FAM236CP0DP71 79 aa9.33□□□□□ -0.92
PHGDH-232ENST00000641947 HMCN2Q8NDA2 5059 aa9.32□□□□□ -0.92
PHGDH-232ENST00000641947 ATP11AUNQ6ZP68 121 aa9.27□□□□□ -0.93
PHGDH-232ENST00000641947 C7orf65Q6ZTY9 151 aa9.27□□□□□ -0.93
PHGDH-232ENST00000641947 HRES1P13985 223 aa9.25□□□□□ -0.93
PHGDH-232ENST00000641947 SPANXA2-OT1Q8N9U9 137 aa9.25□□□□□ -0.93
PHGDH-232ENST00000641947 ATP5EP56381 51 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-232ENST00000641947 SPINK7P58062 85 aa9.22□□□□□ -0.93
PHGDH-232ENST00000641947 MUC17Q685J3 4493 aa9.18□□□□□ -0.94
PHGDH-232ENST00000641947 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
PHGDH-232ENST00000641947 C4orf26Q17RF5 130 aa9.12□□□□□ -0.95
PHGDH-232ENST00000641947 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
PHGDH-232ENST00000641947 SMIM26A0A096LP01 95 aa9.05□□□□□ -0.96
PHGDH-232ENST00000641947 KRTAP3-1Q9BYR8 98 aa9.05□□□□□ -0.96
PHGDH-232ENST00000641947 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
PHGDH-232ENST00000641947 COA5Q86WW8 74 aa9.03□□□□□ -0.96
PHGDH-232ENST00000641947 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
PHGDH-232ENST00000641947 ACYP2P14621 99 aa8.97□□□□□ -0.97
PHGDH-232ENST00000641947 COX6B2Q6YFQ2 88 aa8.97□□□□□ -0.97
PHGDH-232ENST00000641947 MPLKIPQ8TAP9 179 aa8.95□□□□□ -0.98
PHGDH-232ENST00000641947 MUC2Q02817 5179 aa8.94□□□□□ -0.98
PHGDH-232ENST00000641947 A8MUN3 132 aa8.93□□□□□ -0.98
PHGDH-232ENST00000641947 PRO0628Q9UI54 55 aa8.89□□□□□ -0.99
PHGDH-232ENST00000641947 UBR4Q5T4S7 5183 aa8.88□□□□□ -0.99
PHGDH-232ENST00000641947 RNF213Q63HN8 5207 aa8.84□□□□□ -0.99
PHGDH-232ENST00000641947 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms