RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 SS18L2Q9UHA2 77 aa4.12□□□□□ -1.75
PHGDH-225ENST00000641720 TRBV7-4A0A0J9YYF1 115 aa4.11□□□□□ -1.75
PHGDH-225ENST00000641720 A0A1W2PNM2 257 aa4.11□□□□□ -1.75
PHGDH-225ENST00000641720 Q5XG85 94 aa4.11□□□□□ -1.75
PHGDH-225ENST00000641720 K7EP34 96 aa4.1□□□□□ -1.75
PHGDH-225ENST00000641720 Q6Q795 121 aa4.1□□□□□ -1.75
PHGDH-225ENST00000641720 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
PHGDH-225ENST00000641720 FP248Q71RG6 208 aaPredicted RBP4.09□□□□□ -1.75
PHGDH-225ENST00000641720 TEN1Q86WV5 123 aa4.09□□□□□ -1.75
PHGDH-225ENST00000641720 PRO0461Q9UI25 63 aa4.09□□□□□ -1.75
PHGDH-225ENST00000641720 USH2AO75445 5202 aa4.09□□□□□ -1.76
PHGDH-225ENST00000641720 A0A087WSZ3 146 aa4.08□□□□□ -1.76
PHGDH-225ENST00000641720 H3BT86 120 aa4.08□□□□□ -1.76
PHGDH-225ENST00000641720 CCKP06307 115 aa4.08□□□□□ -1.76
PHGDH-225ENST00000641720 RBM3P98179 157 aaKnown RBP4.08□□□□□ -1.76
PHGDH-225ENST00000641720 OBSCN-AS1Q96MR7 158 aa4.08□□□□□ -1.76
PHGDH-225ENST00000641720 C14orf132Q9NPU4 83 aa4.08□□□□□ -1.76
PHGDH-225ENST00000641720 LOC110117498A0A087WWA1 95 aa4.06□□□□□ -1.76
PHGDH-225ENST00000641720 Q6ZQT0 140 aa4.06□□□□□ -1.76
PHGDH-225ENST00000641720 DSCR8Q96T75 97 aa4.06□□□□□ -1.76
PHGDH-225ENST00000641720 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
PHGDH-225ENST00000641720 JMJD7-PLA2G4BH0Y9G9 81 aa4.05□□□□□ -1.76
PHGDH-225ENST00000641720 Q96NJ1 140 aa4.05□□□□□ -1.76
PHGDH-225ENST00000641720 GTF2H5Q6ZYL4 71 aa4.04□□□□□ -1.76
PHGDH-225ENST00000641720 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
PHGDH-225ENST00000641720 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
PHGDH-225ENST00000641720 K7ERU9 68 aa4.02□□□□□ -1.77
PHGDH-225ENST00000641720 XP32Q5T750 250 aa4.02□□□□□ -1.77
PHGDH-225ENST00000641720 LINC00472Q9H8W2 130 aa4.01□□□□□ -1.77
PHGDH-225ENST00000641720 PDE6GP18545 87 aa4□□□□□ -1.77
PHGDH-225ENST00000641720 DEFB116Q30KQ4 102 aa4□□□□□ -1.77
PHGDH-225ENST00000641720 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
PHGDH-225ENST00000641720 ETDBQ3ZM63 59 aa3.99□□□□□ -1.77
PHGDH-225ENST00000641720 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
PHGDH-225ENST00000641720 FAM236DA0A1B0GTK5 79 aa3.98□□□□□ -1.77
PHGDH-225ENST00000641720 F8W1H4 67 aa3.98□□□□□ -1.77
PHGDH-225ENST00000641720 IGKV4-1P06312 121 aa3.98□□□□□ -1.77
PHGDH-225ENST00000641720 FAM236CP0DP71 79 aa3.98□□□□□ -1.77
PHGDH-225ENST00000641720 A0A1B0GW54 56 aa3.97□□□□□ -1.77
PHGDH-225ENST00000641720 J3KT08 172 aa3.97□□□□□ -1.77
PHGDH-225ENST00000641720 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
PHGDH-225ENST00000641720 DSCR10P59022 87 aa3.96□□□□□ -1.78
PHGDH-225ENST00000641720 SYNE2Q8WXH0 6885 aaKnown RBP3.96□□□□□ -1.78
PHGDH-225ENST00000641720 C8orf87E5RJ46 101 aa3.95□□□□□ -1.78
PHGDH-225ENST00000641720 NOTCH2NLQ7Z3S9 236 aa3.95□□□□□ -1.78
PHGDH-225ENST00000641720 IGHV6-1A0A0B4J1U7 121 aa3.93□□□□□ -1.78
PHGDH-225ENST00000641720 A0A1B0GVX0 72 aa3.93□□□□□ -1.78
PHGDH-225ENST00000641720 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
PHGDH-225ENST00000641720 NDUFS5O43920 106 aa3.93□□□□□ -1.78
PHGDH-225ENST00000641720 RPL37P61927 97 aaKnown RBP3.93□□□□□ -1.78
PHGDH-225ENST00000641720 NREPQ16612 68 aa3.93□□□□□ -1.78
PHGDH-225ENST00000641720 LINC00846Q9NV44 126 aa3.93□□□□□ -1.78
PHGDH-225ENST00000641720 IGKV3D-7A0A0C4DH55 119 aa3.92□□□□□ -1.78
PHGDH-225ENST00000641720 A8MWP4 228 aa3.92□□□□□ -1.78
PHGDH-225ENST00000641720 PCOTHQ58A44 107 aa3.92□□□□□ -1.78
PHGDH-225ENST00000641720 KRTAP9-8Q9BYQ0 159 aa3.91□□□□□ -1.78
PHGDH-225ENST00000641720 A8MUU9 505 aa3.9□□□□□ -1.79
PHGDH-225ENST00000641720 K7EQZ3 153 aa3.9□□□□□ -1.79
PHGDH-225ENST00000641720 LINC00313P59037 77 aa3.9□□□□□ -1.79
PHGDH-225ENST00000641720 C20orf166-AS1Q96NR2 134 aa3.9□□□□□ -1.79
PHGDH-225ENST00000641720 BPY2O14599 106 aa3.89□□□□□ -1.79
PHGDH-225ENST00000641720 PRR15Q8IV56 129 aa3.89□□□□□ -1.79
PHGDH-225ENST00000641720 Q8N9L7 120 aa3.89□□□□□ -1.79
PHGDH-225ENST00000641720 MMP24-AS1A0A0U1RRL7 71 aa3.88□□□□□ -1.79
PHGDH-225ENST00000641720 NDUFB1O75438 58 aa3.88□□□□□ -1.79
PHGDH-225ENST00000641720 UBL5Q9BZL1 73 aa3.88□□□□□ -1.79
PHGDH-225ENST00000641720 C8orf17Q9NRJ1 99 aa3.88□□□□□ -1.79
PHGDH-225ENST00000641720 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
PHGDH-225ENST00000641720 LCE2BO14633 110 aa3.86□□□□□ -1.79
PHGDH-225ENST00000641720 PSPHP1O15172 72 aa3.86□□□□□ -1.79
PHGDH-225ENST00000641720 RBM12B-AS1Q9P1G2 102 aa3.86□□□□□ -1.79
PHGDH-225ENST00000641720 SMIM26A0A096LP01 95 aa3.84□□□□□ -1.79
PHGDH-225ENST00000641720 ACYP1P07311 99 aa3.84□□□□□ -1.79
PHGDH-225ENST00000641720 ATP11AUNQ6ZP68 121 aa3.83□□□□□ -1.8
PHGDH-225ENST00000641720 Q8N9P0 234 aaPredicted RBP3.83□□□□□ -1.8
PHGDH-225ENST00000641720 MPLKIPQ8TAP9 179 aa3.83□□□□□ -1.8
PHGDH-225ENST00000641720 TMEM254Q8TBM7 123 aa3.83□□□□□ -1.8
PHGDH-225ENST00000641720 hDV103S1A0JD37 113 aa3.82□□□□□ -1.8
PHGDH-225ENST00000641720 M0R2T5 61 aa3.82□□□□□ -1.8
PHGDH-225ENST00000641720 CXCL6P80162 114 aa3.82□□□□□ -1.8
PHGDH-225ENST00000641720 WFDC13Q8IUB5 93 aa3.82□□□□□ -1.8
PHGDH-225ENST00000641720 ANAPC13Q9BS18 74 aa3.82□□□□□ -1.8
PHGDH-225ENST00000641720 MP68P56378 58 aa3.81□□□□□ -1.8
PHGDH-225ENST00000641720 MRPL34Q9BQ48 92 aaKnown RBP3.81□□□□□ -1.8
PHGDH-225ENST00000641720 HCG22E2RYF7 251 aa3.8□□□□□ -1.8
PHGDH-225ENST00000641720 J3QR89 54 aa3.8□□□□□ -1.8
PHGDH-225ENST00000641720 CASC2Q6XLA1 102 aa3.8□□□□□ -1.8
PHGDH-225ENST00000641720 ZCCHC13Q8WW36 166 aaKnown RBP3.8□□□□□ -1.8
PHGDH-225ENST00000641720 ATP5EP2Q5VTU8 51 aa3.79□□□□□ -1.8
PHGDH-225ENST00000641720 KRTAP9-3Q9BYQ3 159 aa3.79□□□□□ -1.8
PHGDH-225ENST00000641720 MT2AP02795 61 aa3.78□□□□□ -1.8
PHGDH-225ENST00000641720 NEBP20929 6669 aa3.77□□□□□ -1.81
PHGDH-225ENST00000641720 LINC00643Q86TS7 51 aa3.77□□□□□ -1.81
PHGDH-225ENST00000641720 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
PHGDH-225ENST00000641720 MT1FP04733 61 aa3.76□□□□□ -1.81
PHGDH-225ENST00000641720 Q5W150 140 aa3.76□□□□□ -1.81
PHGDH-225ENST00000641720 A0A087WVE0 104 aa3.75□□□□□ -1.81
PHGDH-225ENST00000641720 KRTAP6-3Q3LI67 103 aa3.75□□□□□ -1.81
PHGDH-225ENST00000641720 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
PHGDH-225ENST00000641720 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms