RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 IGKV4-1P06312 121 aa7.54□□□□□ -1.2
PHGDH-221ENST00000641573 Q5XG85 94 aa7.54□□□□□ -1.2
PHGDH-221ENST00000641573 SPINK1P00995 79 aa7.53□□□□□ -1.2
PHGDH-221ENST00000641573 ASB16-AS1Q495Z4 193 aa7.53□□□□□ -1.2
PHGDH-221ENST00000641573 SPAG11AQ6PDA7 123 aa7.53□□□□□ -1.2
PHGDH-221ENST00000641573 LIMD2Q9BT23 127 aa7.53□□□□□ -1.2
PHGDH-221ENST00000641573 FAM236AA0A1B0GUQ0 79 aa7.52□□□□□ -1.21
PHGDH-221ENST00000641573 FAM236BA0A1B0GV22 79 aa7.52□□□□□ -1.21
PHGDH-221ENST00000641573 K7EQZ3 153 aa7.52□□□□□ -1.21
PHGDH-221ENST00000641573 A8MWP4 228 aa7.51□□□□□ -1.21
PHGDH-221ENST00000641573 KRTAP9-2Q9BYQ4 174 aa7.51□□□□□ -1.21
PHGDH-221ENST00000641573 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
PHGDH-221ENST00000641573 RPS29P62273 56 aaKnown RBP7.49□□□□□ -1.21
PHGDH-221ENST00000641573 PRR15Q8IV56 129 aa7.48□□□□□ -1.21
PHGDH-221ENST00000641573 NDUFB1O75438 58 aa7.47□□□□□ -1.21
PHGDH-221ENST00000641573 C1orf195Q5TG92 126 aa7.47□□□□□ -1.21
PHGDH-221ENST00000641573 A0A1B0GVX0 72 aa7.43□□□□□ -1.22
PHGDH-221ENST00000641573 HCG22E2RYF7 251 aa7.43□□□□□ -1.22
PHGDH-221ENST00000641573 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
PHGDH-221ENST00000641573 KRTAP9-6A0A140TA67 174 aa7.42□□□□□ -1.22
PHGDH-221ENST00000641573 ATOX1O00244 68 aa7.42□□□□□ -1.22
PHGDH-221ENST00000641573 WFDC13Q8IUB5 93 aa7.4□□□□□ -1.22
PHGDH-221ENST00000641573 ANAPC13Q9BS18 74 aa7.4□□□□□ -1.22
PHGDH-221ENST00000641573 MMP24-AS1A0A0U1RRL7 71 aa7.39□□□□□ -1.23
PHGDH-221ENST00000641573 PCP4P48539 62 aa7.39□□□□□ -1.23
PHGDH-221ENST00000641573 C8orf17Q9NRJ1 99 aa7.39□□□□□ -1.23
PHGDH-221ENST00000641573 A0A0U1RQV1 116 aa7.38□□□□□ -1.23
PHGDH-221ENST00000641573 CASC2Q6XLA1 102 aa7.38□□□□□ -1.23
PHGDH-221ENST00000641573 NOTCH2NLQ7Z3S9 236 aa7.36□□□□□ -1.23
PHGDH-221ENST00000641573 hDV103S1A0JD37 113 aa7.35□□□□□ -1.23
PHGDH-221ENST00000641573 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
PHGDH-221ENST00000641573 SMIM20Q8N5G0 67 aa7.34□□□□□ -1.23
PHGDH-221ENST00000641573 SERP2Q8N6R1 65 aa7.33□□□□□ -1.24
PHGDH-221ENST00000641573 RETNLBQ9BQ08 111 aa7.33□□□□□ -1.24
PHGDH-221ENST00000641573 TRAV7A0A075B6U4 112 aa7.32□□□□□ -1.24
PHGDH-221ENST00000641573 LINC00313P59037 77 aa7.32□□□□□ -1.24
PHGDH-221ENST00000641573 TMEM254Q8TBM7 123 aa7.32□□□□□ -1.24
PHGDH-221ENST00000641573 OCR1Q9BZK8 76 aa7.31□□□□□ -1.24
PHGDH-221ENST00000641573 MRPL34Q9BQ48 92 aaKnown RBP7.3□□□□□ -1.24
PHGDH-221ENST00000641573 COX7CP15954 63 aa7.29□□□□□ -1.24
PHGDH-221ENST00000641573 FAT4Q6V0I7 4981 aa7.28□□□□□ -1.24
PHGDH-221ENST00000641573 LPAP08519 4548 aa7.26□□□□□ -1.25
PHGDH-221ENST00000641573 MUC2Q02817 5179 aa7.26□□□□□ -1.25
PHGDH-221ENST00000641573 CCDC179H3BU77 68 aa7.26□□□□□ -1.25
PHGDH-221ENST00000641573 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
PHGDH-221ENST00000641573 UQCRQO14949 82 aa7.25□□□□□ -1.25
PHGDH-221ENST00000641573 NDUFS5O43920 106 aa7.25□□□□□ -1.25
PHGDH-221ENST00000641573 FP248Q71RG6 208 aaPredicted RBP7.24□□□□□ -1.25
PHGDH-221ENST00000641573 TP53AIP1Q9HCN2 124 aa7.22□□□□□ -1.25
PHGDH-221ENST00000641573 C9orf92A6NGG3 77 aa7.21□□□□□ -1.26
PHGDH-221ENST00000641573 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
PHGDH-221ENST00000641573 IGLV7-46A0A075B6I9 117 aa7.19□□□□□ -1.26
PHGDH-221ENST00000641573 C5orf47Q569G3 176 aa7.19□□□□□ -1.26
PHGDH-221ENST00000641573 C20orf197Q8N268 126 aa7.19□□□□□ -1.26
PHGDH-221ENST00000641573 LCE2AQ5TA79 106 aaPredicted RBP7.18□□□□□ -1.26
PHGDH-221ENST00000641573 H0Y9P7 68 aa7.16□□□□□ -1.26
PHGDH-221ENST00000641573 MP68P56378 58 aa7.16□□□□□ -1.26
PHGDH-221ENST00000641573 PRR4Q16378 134 aa7.16□□□□□ -1.26
PHGDH-221ENST00000641573 SNURFQ9Y675 71 aa7.15□□□□□ -1.26
PHGDH-221ENST00000641573 TRAV22A0A0B4J277 110 aa7.14□□□□□ -1.27
PHGDH-221ENST00000641573 A8MUU9 505 aa7.12□□□□□ -1.27
PHGDH-221ENST00000641573 KLKP1Q107X0 134 aa7.12□□□□□ -1.27
PHGDH-221ENST00000641573 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
PHGDH-221ENST00000641573 Q5W150 140 aa7.12□□□□□ -1.27
PHGDH-221ENST00000641573 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
PHGDH-221ENST00000641573 LINC00208Q96KT6 92 aa7.11□□□□□ -1.27
PHGDH-221ENST00000641573 CYSTM1Q9H1C7 97 aa7.11□□□□□ -1.27
PHGDH-221ENST00000641573 H3BPC8 53 aa7.1□□□□□ -1.27
PHGDH-221ENST00000641573 ZCCHC13Q8WW36 166 aaKnown RBP7.09□□□□□ -1.27
PHGDH-221ENST00000641573 C1orf64Q8NEQ6 169 aa7.08□□□□□ -1.28
PHGDH-221ENST00000641573 Q75L30 129 aa7.07□□□□□ -1.28
PHGDH-221ENST00000641573 XP32Q5T750 250 aa7.05□□□□□ -1.28
PHGDH-221ENST00000641573 NDUFC1O43677 76 aa7.04□□□□□ -1.28
PHGDH-221ENST00000641573 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
PHGDH-221ENST00000641573 FSIP2Q5CZC0 6907 aa7.03□□□□□ -1.28
PHGDH-221ENST00000641573 LOC101927531A0A1B0GV80 90 aa7.03□□□□□ -1.28
PHGDH-221ENST00000641573 H7BZZ5 65 aa7.03□□□□□ -1.28
PHGDH-221ENST00000641573 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
PHGDH-221ENST00000641573 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
PHGDH-221ENST00000641573 IGKV2-30P06310 120 aa6.99□□□□□ -1.29
PHGDH-221ENST00000641573 MUC17Q685J3 4493 aa6.99□□□□□ -1.29
PHGDH-221ENST00000641573 CYP4F30PQ9H0H9 118 aa6.98□□□□□ -1.29
PHGDH-221ENST00000641573 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
PHGDH-221ENST00000641573 TMEM258P61165 79 aa6.97□□□□□ -1.29
PHGDH-221ENST00000641573 PCOTHQ58A44 107 aa6.97□□□□□ -1.29
PHGDH-221ENST00000641573 ATP11AUNQ6ZP68 121 aa6.97□□□□□ -1.29
PHGDH-221ENST00000641573 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
PHGDH-221ENST00000641573 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
PHGDH-221ENST00000641573 C7orf65Q6ZTY9 151 aa6.92□□□□□ -1.3
PHGDH-221ENST00000641573 ATP5EP56381 51 aaPredicted RBP6.89□□□□□ -1.31
PHGDH-221ENST00000641573 SPINK7P58062 85 aa6.89□□□□□ -1.31
PHGDH-221ENST00000641573 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
PHGDH-221ENST00000641573 HRES1P13985 223 aa6.88□□□□□ -1.31
PHGDH-221ENST00000641573 SEC61BP60468 96 aaKnown RBP6.82□□□□□ -1.32
PHGDH-221ENST00000641573 C4orf26Q17RF5 130 aa6.78□□□□□ -1.32
PHGDH-221ENST00000641573 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
PHGDH-221ENST00000641573 DMAC1Q96GE9 116 aa6.75□□□□□ -1.33
PHGDH-221ENST00000641573 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
PHGDH-221ENST00000641573 ACYP2P14621 99 aa6.71□□□□□ -1.34
PHGDH-221ENST00000641573 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms