RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 JMJD7-PLA2G4BH0Y9G9 81 aa7.61□□□□□ -1.19
SRRT-219ENST00000641476 Q6Q795 121 aa7.61□□□□□ -1.19
SRRT-219ENST00000641476 SS18L2Q9UHA2 77 aa7.61□□□□□ -1.19
SRRT-219ENST00000641476 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
SRRT-219ENST00000641476 TEN1Q86WV5 123 aa7.6□□□□□ -1.19
SRRT-219ENST00000641476 DSCR8Q96T75 97 aa7.59□□□□□ -1.19
SRRT-219ENST00000641476 CCKP06307 115 aa7.57□□□□□ -1.2
SRRT-219ENST00000641476 Q96NJ1 140 aa7.57□□□□□ -1.2
SRRT-219ENST00000641476 C14orf132Q9NPU4 83 aa7.57□□□□□ -1.2
SRRT-219ENST00000641476 A0A087WSZ3 146 aa7.56□□□□□ -1.2
SRRT-219ENST00000641476 Q6ZQT0 140 aa7.56□□□□□ -1.2
SRRT-219ENST00000641476 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
SRRT-219ENST00000641476 LOC110117498A0A087WWA1 95 aa7.55□□□□□ -1.2
SRRT-219ENST00000641476 VPS25Q9BRG1 176 aa7.55□□□□□ -1.2
SRRT-219ENST00000641476 F8W1H4 67 aa7.54□□□□□ -1.2
SRRT-219ENST00000641476 FCGBPQ9Y6R7 5405 aaPredicted RBP7.54□□□□□ -1.2
SRRT-219ENST00000641476 A8MUU9 505 aa7.52□□□□□ -1.21
SRRT-219ENST00000641476 PDE6GP18545 87 aa7.52□□□□□ -1.21
SRRT-219ENST00000641476 SIGMAR1Q99720 223 aa7.5□□□□□ -1.21
SRRT-219ENST00000641476 DSCR10P59022 87 aa7.49□□□□□ -1.21
SRRT-219ENST00000641476 ETDBQ3ZM63 59 aa7.49□□□□□ -1.21
SRRT-219ENST00000641476 SYNE2Q8WXH0 6885 aaKnown RBP7.46□□□□□ -1.22
SRRT-219ENST00000641476 C21orf62-AS1Q17RA5 79 aa7.45□□□□□ -1.22
SRRT-219ENST00000641476 KRTAP19-1Q8IUB9 90 aa7.45□□□□□ -1.22
SRRT-219ENST00000641476 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
SRRT-219ENST00000641476 A0A1B0GW54 56 aa7.44□□□□□ -1.22
SRRT-219ENST00000641476 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
SRRT-219ENST00000641476 MACF1Q9UPN3 7388 aaKnown RBP7.43□□□□□ -1.22
SRRT-219ENST00000641476 KRTAP16-1A8MUX0 517 aa7.41□□□□□ -1.22
SRRT-219ENST00000641476 IGKV4-1P06312 121 aa7.41□□□□□ -1.22
SRRT-219ENST00000641476 DEFB116Q30KQ4 102 aa7.41□□□□□ -1.22
SRRT-219ENST00000641476 LINC00313P59037 77 aa7.39□□□□□ -1.23
SRRT-219ENST00000641476 NREPQ16612 68 aa7.37□□□□□ -1.23
SRRT-219ENST00000641476 NOTCH2NLQ7Z3S9 236 aa7.37□□□□□ -1.23
SRRT-219ENST00000641476 FAM236DA0A1B0GTK5 79 aa7.34□□□□□ -1.23
SRRT-219ENST00000641476 FAM236CP0DP71 79 aa7.34□□□□□ -1.23
SRRT-219ENST00000641476 LINC00846Q9NV44 126 aa7.34□□□□□ -1.23
SRRT-219ENST00000641476 IGHV6-1A0A0B4J1U7 121 aa7.33□□□□□ -1.24
SRRT-219ENST00000641476 LCE2BO14633 110 aa7.33□□□□□ -1.24
SRRT-219ENST00000641476 Q6ZVQ6 151 aa7.33□□□□□ -1.24
SRRT-219ENST00000641476 J3KT08 172 aa7.32□□□□□ -1.24
SRRT-219ENST00000641476 HRES1P13985 223 aa7.32□□□□□ -1.24
SRRT-219ENST00000641476 MT2AP02795 61 aa7.31□□□□□ -1.24
SRRT-219ENST00000641476 MPLKIPQ8TAP9 179 aa7.31□□□□□ -1.24
SRRT-219ENST00000641476 UBL5Q9BZL1 73 aa7.29□□□□□ -1.24
SRRT-219ENST00000641476 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
SRRT-219ENST00000641476 A0A1B0GVX0 72 aa7.28□□□□□ -1.24
SRRT-219ENST00000641476 A8MWP4 228 aa7.27□□□□□ -1.25
SRRT-219ENST00000641476 C8orf87E5RJ46 101 aa7.27□□□□□ -1.25
SRRT-219ENST00000641476 BPY2O14599 106 aa7.27□□□□□ -1.25
SRRT-219ENST00000641476 IGKV3D-7A0A0C4DH55 119 aa7.26□□□□□ -1.25
SRRT-219ENST00000641476 MT1FP04733 61 aa7.26□□□□□ -1.25
SRRT-219ENST00000641476 FAM240AA0A1B0GVK7 77 aa7.25□□□□□ -1.25
SRRT-219ENST00000641476 ACYP1P07311 99 aa7.25□□□□□ -1.25
SRRT-219ENST00000641476 K7ERU9 68 aa7.24□□□□□ -1.25
SRRT-219ENST00000641476 NDUFB1O75438 58 aa7.24□□□□□ -1.25
SRRT-219ENST00000641476 KRTAP9-3Q9BYQ3 159 aa7.24□□□□□ -1.25
SRRT-219ENST00000641476 K7EQZ3 153 aa7.23□□□□□ -1.25
SRRT-219ENST00000641476 PRR15Q8IV56 129 aa7.23□□□□□ -1.25
SRRT-219ENST00000641476 KRTAP10-10P60014 251 aa7.21□□□□□ -1.26
SRRT-219ENST00000641476 Q8N9L7 120 aa7.21□□□□□ -1.26
SRRT-219ENST00000641476 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
SRRT-219ENST00000641476 C8orf17Q9NRJ1 99 aa7.2□□□□□ -1.26
SRRT-219ENST00000641476 J3QR89 54 aa7.18□□□□□ -1.26
SRRT-219ENST00000641476 MMP24-AS1A0A0U1RRL7 71 aa7.17□□□□□ -1.26
SRRT-219ENST00000641476 CXCL6P80162 114 aa7.16□□□□□ -1.26
SRRT-219ENST00000641476 SPINK7P58062 85 aa7.15□□□□□ -1.26
SRRT-219ENST00000641476 KRTAP19-6Q3LI70 58 aa7.15□□□□□ -1.26
SRRT-219ENST00000641476 Q8N9P0 234 aaPredicted RBP7.15□□□□□ -1.26
SRRT-219ENST00000641476 KRTAP6-3Q3LI67 103 aa7.14□□□□□ -1.27
SRRT-219ENST00000641476 hDV103S1A0JD37 113 aa7.11□□□□□ -1.27
SRRT-219ENST00000641476 LINC00643Q86TS7 51 aa7.11□□□□□ -1.27
SRRT-219ENST00000641476 TMEM254Q8TBM7 123 aa7.11□□□□□ -1.27
SRRT-219ENST00000641476 ATP5EP2Q5VTU8 51 aa7.1□□□□□ -1.27
SRRT-219ENST00000641476 WFDC13Q8IUB5 93 aa7.1□□□□□ -1.27
SRRT-219ENST00000641476 MRPL34Q9BQ48 92 aaKnown RBP7.1□□□□□ -1.27
SRRT-219ENST00000641476 CASC2Q6XLA1 102 aa7.08□□□□□ -1.28
SRRT-219ENST00000641476 HCG22E2RYF7 251 aa7.07□□□□□ -1.28
SRRT-219ENST00000641476 NEBP20929 6669 aa7.06□□□□□ -1.28
SRRT-219ENST00000641476 HIST1H4AP62805 103 aaKnown RBP7.03□□□□□ -1.28
SRRT-219ENST00000641476 NDUFS5O43920 106 aa7.02□□□□□ -1.29
SRRT-219ENST00000641476 A0A087WVE0 104 aa7.01□□□□□ -1.29
SRRT-219ENST00000641476 SCGB1A1P11684 91 aa6.98□□□□□ -1.29
SRRT-219ENST00000641476 MT-ATP8P03928 68 aa6.96□□□□□ -1.3
SRRT-219ENST00000641476 Q5W150 140 aa6.94□□□□□ -1.3
SRRT-219ENST00000641476 PCP4P48539 62 aa6.92□□□□□ -1.3
SRRT-219ENST00000641476 H1FX-AS1Q4G0G2 97 aa6.91□□□□□ -1.3
SRRT-219ENST00000641476 KRTAP20-1Q3LI63 56 aa6.9□□□□□ -1.3
SRRT-219ENST00000641476 TP53AIP1Q9HCN2 124 aa6.9□□□□□ -1.3
SRRT-219ENST00000641476 IMUPQ9GZP8 106 aa6.89□□□□□ -1.31
SRRT-219ENST00000641476 MUC12Q9UKN1 5478 aa6.89□□□□□ -1.31
SRRT-219ENST00000641476 IGKV2D-30A0A075B6S6 120 aa6.88□□□□□ -1.31
SRRT-219ENST00000641476 IGKV2-30P06310 120 aa6.88□□□□□ -1.31
SRRT-219ENST00000641476 C7orf65Q6ZTY9 151 aa6.88□□□□□ -1.31
SRRT-219ENST00000641476 OCR1Q9BZK8 76 aa6.82□□□□□ -1.32
SRRT-219ENST00000641476 UQCRQO14949 82 aa6.81□□□□□ -1.32
SRRT-219ENST00000641476 TRAV22A0A0B4J277 110 aa6.8□□□□□ -1.32
SRRT-219ENST00000641476 FAM236AA0A1B0GUQ0 79 aa6.79□□□□□ -1.32
SRRT-219ENST00000641476 FAM236BA0A1B0GV22 79 aa6.79□□□□□ -1.32
SRRT-219ENST00000641476 H0Y9P7 68 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms