RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 C1orf64Q8NEQ6 169 aa9.98□□□□□ -0.81
PHGDH-211ENST00000641213 A0A087X002 238 aa9.98□□□□□ -0.81
PHGDH-211ENST00000641213 SPINK6Q6UWN8 80 aa9.98□□□□□ -0.81
PHGDH-211ENST00000641213 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
PHGDH-211ENST00000641213 TP53AIP1Q9HCN2 124 aa9.98□□□□□ -0.81
PHGDH-211ENST00000641213 KRTAP13-2Q52LG2 175 aa9.97□□□□□ -0.81
PHGDH-211ENST00000641213 CYP4F30PQ9H0H9 118 aa9.97□□□□□ -0.81
PHGDH-211ENST00000641213 PRR4Q16378 134 aa9.95□□□□□ -0.82
PHGDH-211ENST00000641213 MRPL34Q9BQ48 92 aaKnown RBP9.95□□□□□ -0.82
PHGDH-211ENST00000641213 NDUFS5O43920 106 aa9.93□□□□□ -0.82
PHGDH-211ENST00000641213 KRTAP1-4P0C5Y4 121 aa9.91□□□□□ -0.82
PHGDH-211ENST00000641213 SPANXA2-OT1Q8N9U9 137 aa9.91□□□□□ -0.82
PHGDH-211ENST00000641213 VPS13BQ7Z7G8 4022 aa9.88□□□□□ -0.83
PHGDH-211ENST00000641213 SACSQ9NZJ4 4579 aa9.86□□□□□ -0.83
PHGDH-211ENST00000641213 MPLKIPQ8TAP9 179 aa9.84□□□□□ -0.83
PHGDH-211ENST00000641213 C8orf87E5RJ46 101 aa9.83□□□□□ -0.84
PHGDH-211ENST00000641213 C1orf195Q5TG92 126 aa9.83□□□□□ -0.84
PHGDH-211ENST00000641213 PKHD1P08F94 4074 aa9.82□□□□□ -0.84
PHGDH-211ENST00000641213 PCOTHQ58A44 107 aa9.81□□□□□ -0.84
PHGDH-211ENST00000641213 PLA2G1BP04054 148 aaKnown RBP9.8□□□□□ -0.84
PHGDH-211ENST00000641213 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
PHGDH-211ENST00000641213 LINC00336Q6ZUF6 198 aa9.79□□□□□ -0.84
PHGDH-211ENST00000641213 LINC00313P59037 77 aa9.78□□□□□ -0.84
PHGDH-211ENST00000641213 Q5W150 140 aa9.78□□□□□ -0.84
PHGDH-211ENST00000641213 KRTAP13-3Q3SY46 172 aa9.77□□□□□ -0.85
PHGDH-211ENST00000641213 LIMD2Q9BT23 127 aa9.76□□□□□ -0.85
PHGDH-211ENST00000641213 TYMSOSQ8TAI1 123 aa9.75□□□□□ -0.85
PHGDH-211ENST00000641213 Q1T7F1 81 aa9.74□□□□□ -0.85
PHGDH-211ENST00000641213 A0A1B0GVY2 172 aa9.73□□□□□ -0.85
PHGDH-211ENST00000641213 LOC101927531A0A1B0GV80 90 aa9.72□□□□□ -0.85
PHGDH-211ENST00000641213 C4orf48Q5BLP8 95 aa9.72□□□□□ -0.85
PHGDH-211ENST00000641213 DYNC1H1Q14204 4646 aaKnown RBP9.7□□□□□ -0.86
PHGDH-211ENST00000641213 Q8N9P0 234 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-211ENST00000641213 SPINK1P00995 79 aa9.69□□□□□ -0.86
PHGDH-211ENST00000641213 SMR3BP02814 79 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-211ENST00000641213 KRTAP16-1A8MUX0 517 aa9.68□□□□□ -0.86
PHGDH-211ENST00000641213 COA5Q86WW8 74 aa9.67□□□□□ -0.86
PHGDH-211ENST00000641213 PRR26Q8N8Z3 221 aa9.67□□□□□ -0.86
PHGDH-211ENST00000641213 FAM229AH3BQW9 127 aa9.64□□□□□ -0.87
PHGDH-211ENST00000641213 PRO0628Q9UI54 55 aa9.63□□□□□ -0.87
PHGDH-211ENST00000641213 LINC00304Q8N9R0 145 aa9.62□□□□□ -0.87
PHGDH-211ENST00000641213 RETNLBQ9BQ08 111 aa9.62□□□□□ -0.87
PHGDH-211ENST00000641213 V9GYY9 64 aa9.6□□□□□ -0.87
PHGDH-211ENST00000641213 APOBP04114 4563 aaKnown RBP9.6□□□□□ -0.87
PHGDH-211ENST00000641213 KRTAP10-4P60372 401 aaPredicted RBP9.6□□□□□ -0.87
PHGDH-211ENST00000641213 PSPHP1O15172 72 aa9.59□□□□□ -0.87
PHGDH-211ENST00000641213 RPS29P62273 56 aaKnown RBP9.59□□□□□ -0.87
PHGDH-211ENST00000641213 RYR2Q92736 4967 aa9.59□□□□□ -0.87
PHGDH-211ENST00000641213 HRES1P13985 223 aa9.58□□□□□ -0.88
PHGDH-211ENST00000641213 SPAG11AQ6PDA7 123 aa9.57□□□□□ -0.88
PHGDH-211ENST00000641213 KMT2CQ8NEZ4 4911 aaKnown RBP9.56□□□□□ -0.88
PHGDH-211ENST00000641213 BRK1Q8WUW1 75 aa9.55□□□□□ -0.88
PHGDH-211ENST00000641213 IGKV2-30P06310 120 aa9.55□□□□□ -0.88
PHGDH-211ENST00000641213 A8MUN3 132 aa9.54□□□□□ -0.88
PHGDH-211ENST00000641213 FAT1Q14517 4588 aa9.53□□□□□ -0.88
PHGDH-211ENST00000641213 Q5VV11 94 aa9.49□□□□□ -0.89
PHGDH-211ENST00000641213 PKHD1L1Q86WI1 4243 aa9.48□□□□□ -0.89
PHGDH-211ENST00000641213 ACYP2P14621 99 aa9.46□□□□□ -0.89
PHGDH-211ENST00000641213 DMAC1Q96GE9 116 aa9.46□□□□□ -0.9
PHGDH-211ENST00000641213 PRR15LQ9BU68 103 aa9.46□□□□□ -0.9
PHGDH-211ENST00000641213 IGKV2D-30A0A075B6S6 120 aa9.44□□□□□ -0.9
PHGDH-211ENST00000641213 LINC01558Q9Y6Z2 57 aa9.41□□□□□ -0.9
PHGDH-211ENST00000641213 CHKB-CPT1BH3BT56 60 aa9.38□□□□□ -0.91
PHGDH-211ENST00000641213 RYR3Q15413 4870 aa9.37□□□□□ -0.91
PHGDH-211ENST00000641213 Q75L30 129 aa9.37□□□□□ -0.91
PHGDH-211ENST00000641213 C9orf92A6NGG3 77 aa9.36□□□□□ -0.91
PHGDH-211ENST00000641213 A8MUU9 505 aa9.32□□□□□ -0.92
PHGDH-211ENST00000641213 C20orf166-AS1Q96NR2 134 aa9.32□□□□□ -0.92
PHGDH-211ENST00000641213 C7orf65Q6ZTY9 151 aa9.31□□□□□ -0.92
PHGDH-211ENST00000641213 FLG2Q5D862 2391 aaPredicted RBP9.29□□□□□ -0.92
PHGDH-211ENST00000641213 A8MU10 97 aa9.27□□□□□ -0.93
PHGDH-211ENST00000641213 A6NED7 52 aa9.25□□□□□ -0.93
PHGDH-211ENST00000641213 Q5VSD8 79 aa9.25□□□□□ -0.93
PHGDH-211ENST00000641213 Q8N1X5 172 aa9.25□□□□□ -0.93
PHGDH-211ENST00000641213 HSPG2P98160 4391 aa9.23□□□□□ -0.93
PHGDH-211ENST00000641213 KRTAP10-8P60410 259 aa9.22□□□□□ -0.93
PHGDH-211ENST00000641213 LCA10Q71F78 164 aa9.21□□□□□ -0.93
PHGDH-211ENST00000641213 TNXBP22105 4242 aa9.21□□□□□ -0.94
PHGDH-211ENST00000641213 LRP1Q07954 4544 aaKnown RBP9.2□□□□□ -0.94
PHGDH-211ENST00000641213 SPINK7P58062 85 aa9.18□□□□□ -0.94
PHGDH-211ENST00000641213 SEC61GP60059 68 aa9.18□□□□□ -0.94
PHGDH-211ENST00000641213 FAT3Q8TDW7 4589 aa9.16□□□□□ -0.94
PHGDH-211ENST00000641213 CDC42SE1Q9NRR8 79 aa9.16□□□□□ -0.94
PHGDH-211ENST00000641213 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
PHGDH-211ENST00000641213 RYR1P21817 5038 aa9.14□□□□□ -0.95
PHGDH-211ENST00000641213 A0A1B0GU69 56 aa9.12□□□□□ -0.95
PHGDH-211ENST00000641213 PMAIP1Q13794 54 aa9.07□□□□□ -0.96
PHGDH-211ENST00000641213 ATP11AUNQ6ZP68 121 aa9.07□□□□□ -0.96
PHGDH-211ENST00000641213 SPTSSBQ8NFR3 76 aa9.06□□□□□ -0.96
PHGDH-211ENST00000641213 KRTAP3-1Q9BYR8 98 aa9.06□□□□□ -0.96
PHGDH-211ENST00000641213 EPPK1P58107 5090 aaKnown RBP9.05□□□□□ -0.96
PHGDH-211ENST00000641213 DMBT1Q9UGM3 2413 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-211ENST00000641213 KIAA1109Q2LD37 5005 aa9□□□□□ -0.97
PHGDH-211ENST00000641213 MT1HL1P0DM35 61 aa8.98□□□□□ -0.97
PHGDH-211ENST00000641213 RPL37P61927 97 aaKnown RBP8.96□□□□□ -0.98
PHGDH-211ENST00000641213 XP32Q5T750 250 aa8.95□□□□□ -0.98
PHGDH-211ENST00000641213 COX6B2Q6YFQ2 88 aa8.94□□□□□ -0.98
PHGDH-211ENST00000641213 UQCR11O14957 56 aa8.92□□□□□ -0.98
PHGDH-211ENST00000641213 A6NN06 94 aa8.92□□□□□ -0.98
PHGDH-211ENST00000641213 SPATA8Q6RVD6 105 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms