RNA–Protein interactions for RNA: ENST00000639702.1

RBM39-245, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 5,914 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-245ENST00000639702 FRYQ5TBA9 3013 aa6.14□□□□□ -1.43
RBM39-245ENST00000639702 UNC80Q8N2C7 3258 aa6.13□□□□□ -1.43
RBM39-245ENST00000639702 APCP25054 2843 aa6.1□□□□□ -1.43
RBM39-245ENST00000639702 UTP20O75691 2785 aaKnown RBP6.1□□□□□ -1.43
RBM39-245ENST00000639702 LAMA2P24043 3122 aaKnown RBP6.07□□□□□ -1.44
RBM39-245ENST00000639702 LAMA1P25391 3075 aa6.06□□□□□ -1.44
RBM39-245ENST00000639702 LRBAP50851 2863 aa6.01□□□□□ -1.45
RBM39-245ENST00000639702 KALRNO60229 2985 aa5.98□□□□□ -1.45
RBM39-245ENST00000639702 TENM4Q6N022 2769 aa5.98□□□□□ -1.45
RBM39-245ENST00000639702 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
RBM39-245ENST00000639702 FLNCQ14315 2725 aa5.97□□□□□ -1.45
RBM39-245ENST00000639702 VPS13AQ96RL7 3174 aa5.96□□□□□ -1.45
RBM39-245ENST00000639702 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.459e-8■□□□□ 8.9
RBM39-245ENST00000639702 KRTAP12-2P59991 146 aa5.96□□□□□ -1.45
RBM39-245ENST00000639702 ATMQ13315 3056 aa5.96□□□□□ -1.46
RBM39-245ENST00000639702 COL12A1Q99715 3063 aa5.91□□□□□ -1.46
RBM39-245ENST00000639702 TACC2O95359 2948 aa5.91□□□□□ -1.46
RBM39-245ENST00000639702 CDH23Q9H251 3354 aa5.91□□□□□ -1.46
RBM39-245ENST00000639702 EYSQ5T1H1 3165 aa5.91□□□□□ -1.46
RBM39-245ENST00000639702 XIRP2A4UGR9 3374 aa5.9□□□□□ -1.47
RBM39-245ENST00000639702 CRYBG3Q68DQ2 2970 aa5.88□□□□□ -1.47
RBM39-245ENST00000639702 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
RBM39-245ENST00000639702 CELSR3Q9NYQ7 3312 aa5.83□□□□□ -1.48
RBM39-245ENST00000639702 COL6A3P12111 3177 aa5.82□□□□□ -1.48
RBM39-245ENST00000639702 ADGRG4Q8IZF6 3080 aa5.81□□□□□ -1.48
RBM39-245ENST00000639702 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
RBM39-245ENST00000639702 SZT2Q5T011 3432 aa5.8□□□□□ -1.48
RBM39-245ENST00000639702 FRYLO94915 3013 aa5.79□□□□□ -1.48
RBM39-245ENST00000639702 DMXL2Q8TDJ6 3036 aa5.79□□□□□ -1.48
RBM39-245ENST00000639702 HRNRQ86YZ3 2850 aaPredicted RBP5.76□□□□□ -1.49
RBM39-245ENST00000639702 ASH1LQ9NR48 2969 aaKnown RBP5.75□□□□□ -1.49
RBM39-245ENST00000639702 CELSR2Q9HCU4 2923 aa5.75□□□□□ -1.49
RBM39-245ENST00000639702 TENM2Q9NT68 2774 aa5.75□□□□□ -1.49
RBM39-245ENST00000639702 TNRC18O15417 2968 aaPredicted RBP5.74□□□□□ -1.49
RBM39-245ENST00000639702 KRTAP15-1Q3LI76 137 aa5.73□□□□□ -1.49
RBM39-245ENST00000639702 DCHS2Q6V1P9 2916 aa5.73□□□□□ -1.49
RBM39-245ENST00000639702 ZZEF1O43149 2961 aa5.73□□□□□ -1.49
RBM39-245ENST00000639702 NBEAQ8NFP9 2946 aa5.72□□□□□ -1.49
RBM39-245ENST00000639702 BOD1L1Q8NFC6 3051 aa5.71□□□□□ -1.5
RBM39-245ENST00000639702 REV3LO60673 3130 aa5.7□□□□□ -1.5
RBM39-245ENST00000639702 FREM2Q5SZK8 3169 aa5.68□□□□□ -1.5
RBM39-245ENST00000639702 VCANP13611 3396 aa5.68□□□□□ -1.5
RBM39-245ENST00000639702 TENM1Q9UKZ4 2725 aa5.67□□□□□ -1.5
RBM39-245ENST00000639702 USP34Q70CQ2 3546 aa5.66□□□□□ -1.5
RBM39-245ENST00000639702 DNAH14Q0VDD8 3507 aa5.66□□□□□ -1.5
RBM39-245ENST00000639702 KRTAP10-6P60371 365 aaPredicted RBP5.65□□□□□ -1.5
RBM39-245ENST00000639702 TGP01266 2768 aa5.65□□□□□ -1.51
RBM39-245ENST00000639702 ZANQ9Y493 2812 aa5.62□□□□□ -1.51
RBM39-245ENST00000639702 MT1HL1P0DM35 61 aa5.62□□□□□ -1.51
RBM39-245ENST00000639702 SPTBN5Q9NRC6 3674 aaKnown RBP5.62□□□□□ -1.51
RBM39-245ENST00000639702 NF1P21359 2839 aa5.61□□□□□ -1.51
RBM39-245ENST00000639702 CFAP47Q6ZTR5 3102 aa5.59□□□□□ -1.51
RBM39-245ENST00000639702 TENM3Q9P273 2699 aa5.57□□□□□ -1.52
RBM39-245ENST00000639702 CELSR1Q9NYQ6 3014 aa5.56□□□□□ -1.52
RBM39-245ENST00000639702 SPEGQ15772 3267 aa5.53□□□□□ -1.52
RBM39-245ENST00000639702 DMXL1Q9Y485 3027 aa5.51□□□□□ -1.53
RBM39-245ENST00000639702 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
RBM39-245ENST00000639702 FBN2P35556 2912 aa5.5□□□□□ -1.53
RBM39-245ENST00000639702 PDZD2O15018 2839 aa5.49□□□□□ -1.53
RBM39-245ENST00000639702 MYO15AQ9UKN7 3530 aa5.48□□□□□ -1.53
RBM39-245ENST00000639702 MXRA5Q9NR99 2828 aa5.48□□□□□ -1.53
RBM39-245ENST00000639702 MUC3AQ02505 3323 aa5.45□□□□□ -1.54
RBM39-245ENST00000639702 ANK3Q12955 4377 aaKnown RBP5.45□□□□□ -1.54
RBM39-245ENST00000639702 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
RBM39-245ENST00000639702 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
RBM39-245ENST00000639702 KRTAP10-4P60372 401 aaPredicted RBP5.44□□□□□ -1.54
RBM39-245ENST00000639702 INE1O15225 51 aa5.43□□□□□ -1.54
RBM39-245ENST00000639702 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
RBM39-245ENST00000639702 ALMS1Q8TCU4 4167 aa5.38□□□□□ -1.55
RBM39-245ENST00000639702 KRTAP4-5Q9BYR2 181 aa5.34□□□□□ -1.55
RBM39-245ENST00000639702 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
RBM39-245ENST00000639702 DMDP11532 3685 aa5.3□□□□□ -1.56
RBM39-245ENST00000639702 CRCT1Q9UGL9 99 aa5.29□□□□□ -1.56
RBM39-245ENST00000639702 LOC400499M0QZD8 3231 aa5.28□□□□□ -1.56
RBM39-245ENST00000639702 HUWE1Q7Z6Z7 4374 aaKnown RBP5.28□□□□□ -1.56
RBM39-245ENST00000639702 NBPF19A0A087WUL8 3843 aa5.26□□□□□ -1.57
RBM39-245ENST00000639702 PKD1L1Q8TDX9 2849 aa5.25□□□□□ -1.57
RBM39-245ENST00000639702 OTOGQ6ZRI0 2925 aa5.22□□□□□ -1.57
RBM39-245ENST00000639702 LCE3AQ5TA76 89 aa5.22□□□□□ -1.57
RBM39-245ENST00000639702 WDFY3Q8IZQ1 3526 aa5.21□□□□□ -1.58
RBM39-245ENST00000639702 VWFP04275 2813 aa5.19□□□□□ -1.58
RBM39-245ENST00000639702 ASPMQ8IZT6 3477 aa5.15□□□□□ -1.59
RBM39-245ENST00000639702 FBN1P35555 2871 aaKnown RBP5.13□□□□□ -1.59
RBM39-245ENST00000639702 RELNP78509 3460 aa5.12□□□□□ -1.59
RBM39-245ENST00000639702 LAMA5O15230 3695 aa5.12□□□□□ -1.59
RBM39-245ENST00000639702 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
RBM39-245ENST00000639702 DCHS1Q96JQ0 3298 aa5.1□□□□□ -1.59
RBM39-245ENST00000639702 LORP23490 312 aaPredicted RBP5.08□□□□□ -1.6
RBM39-245ENST00000639702 FBN3Q75N90 2809 aa5.07□□□□□ -1.6
RBM39-245ENST00000639702 MEGF8Q7Z7M0 2845 aa5.06□□□□□ -1.6
RBM39-245ENST00000639702 ZFHX4Q86UP3 3567 aa5□□□□□ -1.61
RBM39-245ENST00000639702 DNAH2Q9P225 4427 aa4.97□□□□□ -1.61
RBM39-245ENST00000639702 MT1HP80294 61 aa4.95□□□□□ -1.62
RBM39-245ENST00000639702 KRTAP10-5P60370 271 aa4.93□□□□□ -1.62
RBM39-245ENST00000639702 DNAH1Q9P2D7 4330 aa4.93□□□□□ -1.62
RBM39-245ENST00000639702 ZFHX3Q15911 3703 aa4.9□□□□□ -1.63
RBM39-245ENST00000639702 DNAH9Q9NYC9 4486 aa4.9□□□□□ -1.63
RBM39-245ENST00000639702 TRRAPQ9Y4A5 3859 aa4.89□□□□□ -1.63
RBM39-245ENST00000639702 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
RBM39-245ENST00000639702 CSMD1Q96PZ7 3565 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms