RNA–Protein interactions for RNA: ENST00000639054.1

PAX6-250, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-250ENST00000639054 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
PAX6-250ENST00000639054 CD164Q04900 197 aa6.78□□□□□ -1.32
PAX6-250ENST00000639054 NREPQ16612 68 aa6.78□□□□□ -1.32
PAX6-250ENST00000639054 C4orf48Q5BLP8 95 aa6.78□□□□□ -1.32
PAX6-250ENST00000639054 KLKP1Q107X0 134 aa6.76□□□□□ -1.33
PAX6-250ENST00000639054 A0A1B0GW54 56 aa6.75□□□□□ -1.33
PAX6-250ENST00000639054 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
PAX6-250ENST00000639054 CXCL6P80162 114 aa6.74□□□□□ -1.33
PAX6-250ENST00000639054 SPINK1P00995 79 aa6.74□□□□□ -1.33
PAX6-250ENST00000639054 Q96NJ1 140 aa6.74□□□□□ -1.33
PAX6-250ENST00000639054 SNURFQ9Y675 71 aa6.73□□□□□ -1.33
PAX6-250ENST00000639054 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
PAX6-250ENST00000639054 DMBT1Q9UGM3 2413 aaPredicted RBP6.72□□□□□ -1.33
PAX6-250ENST00000639054 SPAG11AQ6PDA7 123 aa6.71□□□□□ -1.33
PAX6-250ENST00000639054 PCLOQ9Y6V0 5065 aa6.7□□□□□ -1.34
PAX6-250ENST00000639054 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
PAX6-250ENST00000639054 Q8N9L7 120 aa6.7□□□□□ -1.34
PAX6-250ENST00000639054 BPY2O14599 106 aa6.69□□□□□ -1.34
PAX6-250ENST00000639054 C1orf195Q5TG92 126 aa6.69□□□□□ -1.34
PAX6-250ENST00000639054 FP248Q71RG6 208 aaPredicted RBP6.69□□□□□ -1.34
PAX6-250ENST00000639054 RETNLBQ9BQ08 111 aa6.69□□□□□ -1.34
PAX6-250ENST00000639054 KRTAP29-1A8MX34 341 aaPredicted RBP6.69□□□□□ -1.34
PAX6-250ENST00000639054 LIMD2Q9BT23 127 aa6.69□□□□□ -1.34
PAX6-250ENST00000639054 IGKV4-1P06312 121 aa6.68□□□□□ -1.34
PAX6-250ENST00000639054 DSCR10P59022 87 aa6.68□□□□□ -1.34
PAX6-250ENST00000639054 SMIM26A0A096LP01 95 aa6.66□□□□□ -1.34
PAX6-250ENST00000639054 ASB16-AS1Q495Z4 193 aa6.66□□□□□ -1.34
PAX6-250ENST00000639054 NDUFC1O43677 76 aa6.66□□□□□ -1.34
PAX6-250ENST00000639054 RPS29P62273 56 aaKnown RBP6.66□□□□□ -1.34
PAX6-250ENST00000639054 K7EQZ3 153 aa6.65□□□□□ -1.35
PAX6-250ENST00000639054 PRO0628Q9UI54 55 aa6.64□□□□□ -1.35
PAX6-250ENST00000639054 J3QL48 77 aa6.63□□□□□ -1.35
PAX6-250ENST00000639054 TMEM254Q8TBM7 123 aa6.63□□□□□ -1.35
PAX6-250ENST00000639054 ATP5EP56381 51 aaPredicted RBP6.61□□□□□ -1.35
PAX6-250ENST00000639054 A8MWP4 228 aa6.61□□□□□ -1.35
PAX6-250ENST00000639054 OCR1Q9BZK8 76 aa6.6□□□□□ -1.35
PAX6-250ENST00000639054 IGHV6-1A0A0B4J1U7 121 aa6.6□□□□□ -1.35
PAX6-250ENST00000639054 NOTCH2NLQ7Z3S9 236 aa6.6□□□□□ -1.35
PAX6-250ENST00000639054 A0A0U1RQV1 116 aa6.59□□□□□ -1.35
PAX6-250ENST00000639054 PRR15Q8IV56 129 aa6.59□□□□□ -1.36
PAX6-250ENST00000639054 A0A1B0GVX0 72 aa6.57□□□□□ -1.36
PAX6-250ENST00000639054 NDUFB1O75438 58 aa6.57□□□□□ -1.36
PAX6-250ENST00000639054 HERC1Q15751 4861 aa6.55□□□□□ -1.36
PAX6-250ENST00000639054 WFDC13Q8IUB5 93 aa6.54□□□□□ -1.36
PAX6-250ENST00000639054 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
PAX6-250ENST00000639054 C9orf92A6NGG3 77 aa6.53□□□□□ -1.36
PAX6-250ENST00000639054 C8orf17Q9NRJ1 99 aa6.53□□□□□ -1.36
PAX6-250ENST00000639054 PRR4Q16378 134 aa6.52□□□□□ -1.37
PAX6-250ENST00000639054 MPLKIPQ8TAP9 179 aa6.51□□□□□ -1.37
PAX6-250ENST00000639054 LPAP08519 4548 aa6.51□□□□□ -1.37
PAX6-250ENST00000639054 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
PAX6-250ENST00000639054 IGLV7-46A0A075B6I9 117 aa6.5□□□□□ -1.37
PAX6-250ENST00000639054 LINC00313P59037 77 aa6.5□□□□□ -1.37
PAX6-250ENST00000639054 BRK1Q8WUW1 75 aa6.5□□□□□ -1.37
PAX6-250ENST00000639054 CASC2Q6XLA1 102 aa6.49□□□□□ -1.37
PAX6-250ENST00000639054 hDV103S1A0JD37 113 aa6.48□□□□□ -1.37
PAX6-250ENST00000639054 KRTAP16-1A8MUX0 517 aa6.46□□□□□ -1.37
PAX6-250ENST00000639054 C8orf87E5RJ46 101 aa6.46□□□□□ -1.37
PAX6-250ENST00000639054 ZCCHC13Q8WW36 166 aaKnown RBP6.46□□□□□ -1.38
PAX6-250ENST00000639054 KRTAP13-3Q3SY46 172 aa6.44□□□□□ -1.38
PAX6-250ENST00000639054 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
PAX6-250ENST00000639054 NDUFS5O43920 106 aa6.42□□□□□ -1.38
PAX6-250ENST00000639054 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
PAX6-250ENST00000639054 LRP2P98164 4655 aa6.41□□□□□ -1.38
PAX6-250ENST00000639054 Q1T7F1 81 aa6.4□□□□□ -1.38
PAX6-250ENST00000639054 HMCN2Q8NDA2 5059 aa6.39□□□□□ -1.39
PAX6-250ENST00000639054 Q8N9P0 234 aaPredicted RBP6.38□□□□□ -1.39
PAX6-250ENST00000639054 XP32Q5T750 250 aa6.38□□□□□ -1.39
PAX6-250ENST00000639054 TPRXLQ17RH7 258 aa6.37□□□□□ -1.39
PAX6-250ENST00000639054 CYP4F30PQ9H0H9 118 aa6.37□□□□□ -1.39
PAX6-250ENST00000639054 C20orf166-AS1Q96NR2 134 aa6.35□□□□□ -1.39
PAX6-250ENST00000639054 A8MUU9 505 aa6.34□□□□□ -1.39
PAX6-250ENST00000639054 Q5W150 140 aa6.34□□□□□ -1.39
PAX6-250ENST00000639054 TRAV22A0A0B4J277 110 aa6.33□□□□□ -1.4
PAX6-250ENST00000639054 V9GYY9 64 aa6.33□□□□□ -1.4
PAX6-250ENST00000639054 SEC61GP60059 68 aa6.33□□□□□ -1.4
PAX6-250ENST00000639054 PSPHP1O15172 72 aa6.32□□□□□ -1.4
PAX6-250ENST00000639054 Q75L30 129 aa6.3□□□□□ -1.4
PAX6-250ENST00000639054 RPL37P61927 97 aaKnown RBP6.29□□□□□ -1.4
PAX6-250ENST00000639054 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
PAX6-250ENST00000639054 MP68P56378 58 aa6.27□□□□□ -1.41
PAX6-250ENST00000639054 A8MUN3 132 aa6.27□□□□□ -1.41
PAX6-250ENST00000639054 H0Y9P7 68 aa6.27□□□□□ -1.41
PAX6-250ENST00000639054 LINC00208Q96KT6 92 aa6.27□□□□□ -1.41
PAX6-250ENST00000639054 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
PAX6-250ENST00000639054 PCOTHQ58A44 107 aa6.24□□□□□ -1.41
PAX6-250ENST00000639054 Q5VV11 94 aa6.24□□□□□ -1.41
PAX6-250ENST00000639054 ATP11AUNQ6ZP68 121 aa6.24□□□□□ -1.41
PAX6-250ENST00000639054 A8MU10 97 aa6.24□□□□□ -1.41
PAX6-250ENST00000639054 SPANXA2-OT1Q8N9U9 137 aa6.24□□□□□ -1.41
PAX6-250ENST00000639054 H3BPC8 53 aa6.21□□□□□ -1.42
PAX6-250ENST00000639054 IGKV2D-30A0A075B6S6 120 aa6.19□□□□□ -1.42
PAX6-250ENST00000639054 IGKV2-30P06310 120 aa6.19□□□□□ -1.42
PAX6-250ENST00000639054 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
PAX6-250ENST00000639054 CHKB-CPT1BH3BT56 60 aa6.16□□□□□ -1.42
PAX6-250ENST00000639054 SPINK7P58062 85 aa6.15□□□□□ -1.43
PAX6-250ENST00000639054 SEC61BP60468 96 aaKnown RBP6.15□□□□□ -1.43
PAX6-250ENST00000639054 PRR15LQ9BU68 103 aa6.15□□□□□ -1.43
PAX6-250ENST00000639054 KRTAP4-1Q9BYQ7 146 aa6.14□□□□□ -1.43
PAX6-250ENST00000639054 UBR4Q5T4S7 5183 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms