RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 LINC00483Q53H64 154 aa5.92□□□□□ -1.46
ATM-226ENST00000638443 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
ATM-226ENST00000638443 A0A087WSZ3 146 aa5.91□□□□□ -1.46
ATM-226ENST00000638443 NREPQ16612 68 aa5.9□□□□□ -1.46
ATM-226ENST00000638443 MOBPQ13875 183 aa5.9□□□□□ -1.47
ATM-226ENST00000638443 SMR3BP02814 79 aaPredicted RBP5.89□□□□□ -1.47
ATM-226ENST00000638443 DEFB116Q30KQ4 102 aa5.89□□□□□ -1.47
ATM-226ENST00000638443 ATP5EP2Q5VTU8 51 aa5.89□□□□□ -1.47
ATM-226ENST00000638443 BPY2O14599 106 aa5.88□□□□□ -1.47
ATM-226ENST00000638443 CXCL6P80162 114 aa5.87□□□□□ -1.47
ATM-226ENST00000638443 SERP1Q9Y6X1 66 aa5.87□□□□□ -1.47
ATM-226ENST00000638443 FP248Q71RG6 208 aaPredicted RBP5.87□□□□□ -1.47
ATM-226ENST00000638443 A0A087X002 238 aa5.86□□□□□ -1.47
ATM-226ENST00000638443 C7orf65Q6ZTY9 151 aa5.85□□□□□ -1.47
ATM-226ENST00000638443 ADM2Q7Z4H4 148 aa5.84□□□□□ -1.47
ATM-226ENST00000638443 IGKV4-1P06312 121 aa5.84□□□□□ -1.47
ATM-226ENST00000638443 DSCR10P59022 87 aa5.83□□□□□ -1.48
ATM-226ENST00000638443 A0A1B0GW54 56 aa5.83□□□□□ -1.48
ATM-226ENST00000638443 K7EQZ3 153 aa5.83□□□□□ -1.48
ATM-226ENST00000638443 KRTAP1-4P0C5Y4 121 aa5.83□□□□□ -1.48
ATM-226ENST00000638443 RPL37AP61513 92 aaKnown RBP5.83□□□□□ -1.48
ATM-226ENST00000638443 C8orf17Q9NRJ1 99 aa5.83□□□□□ -1.48
ATM-226ENST00000638443 KRTAP13-2Q52LG2 175 aa5.82□□□□□ -1.48
ATM-226ENST00000638443 COX7CP15954 63 aa5.79□□□□□ -1.48
ATM-226ENST00000638443 HSPG2P98160 4391 aa5.79□□□□□ -1.48
ATM-226ENST00000638443 KRTAP10-4P60372 401 aaPredicted RBP5.78□□□□□ -1.48
ATM-226ENST00000638443 Q96NJ1 140 aa5.78□□□□□ -1.48
ATM-226ENST00000638443 LINC00472Q9H8W2 130 aa5.78□□□□□ -1.48
ATM-226ENST00000638443 ATOX1O00244 68 aa5.78□□□□□ -1.48
ATM-226ENST00000638443 LUZP6Q538Z0 58 aa5.76□□□□□ -1.49
ATM-226ENST00000638443 EPPK1P58107 5090 aaKnown RBP5.76□□□□□ -1.49
ATM-226ENST00000638443 FAM229BQ4G0N7 80 aa5.73□□□□□ -1.49
ATM-226ENST00000638443 SPINK6Q6UWN8 80 aa5.73□□□□□ -1.49
ATM-226ENST00000638443 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
ATM-226ENST00000638443 SSBP3-AS1Q7Z2R9 100 aa5.72□□□□□ -1.49
ATM-226ENST00000638443 WFDC13Q8IUB5 93 aa5.72□□□□□ -1.49
ATM-226ENST00000638443 CYSTM1Q9H1C7 97 aa5.72□□□□□ -1.49
ATM-226ENST00000638443 SERP2Q8N6R1 65 aa5.72□□□□□ -1.49
ATM-226ENST00000638443 A8MWP4 228 aa5.71□□□□□ -1.5
ATM-226ENST00000638443 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.5
ATM-226ENST00000638443 RYR1P21817 5038 aa5.71□□□□□ -1.5
ATM-226ENST00000638443 KIAA1109Q2LD37 5005 aa5.71□□□□□ -1.5
ATM-226ENST00000638443 A6NN06 94 aa5.7□□□□□ -1.5
ATM-226ENST00000638443 HCG22E2RYF7 251 aa5.7□□□□□ -1.5
ATM-226ENST00000638443 LRP1Q07954 4544 aaKnown RBP5.7□□□□□ -1.5
ATM-226ENST00000638443 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
ATM-226ENST00000638443 MMP24-AS1A0A0U1RRL7 71 aa5.67□□□□□ -1.5
ATM-226ENST00000638443 TRAV7A0A075B6U4 112 aa5.66□□□□□ -1.5
ATM-226ENST00000638443 KRTAP29-1A8MX34 341 aaPredicted RBP5.66□□□□□ -1.5
ATM-226ENST00000638443 Q5VSD8 79 aa5.66□□□□□ -1.5
ATM-226ENST00000638443 C20orf197Q8N268 126 aa5.66□□□□□ -1.5
ATM-226ENST00000638443 A6NED7 52 aa5.65□□□□□ -1.5
ATM-226ENST00000638443 CASC2Q6XLA1 102 aa5.65□□□□□ -1.5
ATM-226ENST00000638443 SNURFQ9Y675 71 aa5.65□□□□□ -1.51
ATM-226ENST00000638443 A0A1B0GVX0 72 aa5.64□□□□□ -1.51
ATM-226ENST00000638443 NDUFB1O75438 58 aa5.63□□□□□ -1.51
ATM-226ENST00000638443 LINC00304Q8N9R0 145 aa5.62□□□□□ -1.51
ATM-226ENST00000638443 hDV103S1A0JD37 113 aa5.62□□□□□ -1.51
ATM-226ENST00000638443 ATP11AUNQ6ZP68 121 aa5.62□□□□□ -1.51
ATM-226ENST00000638443 MYCBP2O75592 4640 aa5.61□□□□□ -1.51
ATM-226ENST00000638443 TNXBP22105 4242 aa5.61□□□□□ -1.51
ATM-226ENST00000638443 ASB16-AS1Q495Z4 193 aa5.61□□□□□ -1.51
ATM-226ENST00000638443 Q8N1X5 172 aa5.61□□□□□ -1.51
ATM-226ENST00000638443 RETNLBQ9BQ08 111 aa5.61□□□□□ -1.51
ATM-226ENST00000638443 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
ATM-226ENST00000638443 FAT3Q8TDW7 4589 aa5.59□□□□□ -1.51
ATM-226ENST00000638443 LIMD2Q9BT23 127 aa5.59□□□□□ -1.51
ATM-226ENST00000638443 SPINK1P00995 79 aa5.59□□□□□ -1.52
ATM-226ENST00000638443 TMEM254Q8TBM7 123 aa5.59□□□□□ -1.52
ATM-226ENST00000638443 K7ERS5 55 aa5.58□□□□□ -1.52
ATM-226ENST00000638443 KLKP1Q107X0 134 aa5.56□□□□□ -1.52
ATM-226ENST00000638443 MRPL34Q9BQ48 92 aaKnown RBP5.55□□□□□ -1.52
ATM-226ENST00000638443 FLG2Q5D862 2391 aaPredicted RBP5.55□□□□□ -1.52
ATM-226ENST00000638443 H7BZZ5 65 aa5.54□□□□□ -1.52
ATM-226ENST00000638443 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
ATM-226ENST00000638443 C1orf64Q8NEQ6 169 aa5.54□□□□□ -1.52
ATM-226ENST00000638443 SPAG11AQ6PDA7 123 aa5.53□□□□□ -1.52
ATM-226ENST00000638443 KRTAP4-5Q9BYR2 181 aa5.53□□□□□ -1.52
ATM-226ENST00000638443 KRTAP3-1Q9BYR8 98 aa5.53□□□□□ -1.52
ATM-226ENST00000638443 H0Y9P7 68 aa5.52□□□□□ -1.53
ATM-226ENST00000638443 RPS29P62273 56 aaKnown RBP5.51□□□□□ -1.53
ATM-226ENST00000638443 ZCCHC13Q8WW36 166 aaKnown RBP5.5□□□□□ -1.53
ATM-226ENST00000638443 LINC00208Q96KT6 92 aa5.5□□□□□ -1.53
ATM-226ENST00000638443 TRAV22A0A0B4J277 110 aa5.5□□□□□ -1.53
ATM-226ENST00000638443 KRTAP10-8P60410 259 aa5.5□□□□□ -1.53
ATM-226ENST00000638443 IGLV7-46A0A075B6I9 117 aa5.49□□□□□ -1.53
ATM-226ENST00000638443 Q5W150 140 aa5.49□□□□□ -1.53
ATM-226ENST00000638443 C9orf92A6NGG3 77 aa5.48□□□□□ -1.53
ATM-226ENST00000638443 ROMO1P60602 79 aa5.48□□□□□ -1.53
ATM-226ENST00000638443 MT1HL1P0DM35 61 aa5.47□□□□□ -1.53
ATM-226ENST00000638443 Q1T7F1 81 aa5.46□□□□□ -1.54
ATM-226ENST00000638443 A8MUU9 505 aa5.45□□□□□ -1.54
ATM-226ENST00000638443 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
ATM-226ENST00000638443 TP53AIP1Q9HCN2 124 aa5.45□□□□□ -1.54
ATM-226ENST00000638443 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
ATM-226ENST00000638443 ABCA13Q86UQ4 5058 aa5.43□□□□□ -1.54
ATM-226ENST00000638443 NDUFC1O43677 76 aa5.42□□□□□ -1.54
ATM-226ENST00000638443 PCOTHQ58A44 107 aa5.42□□□□□ -1.54
ATM-226ENST00000638443 DMBT1Q9UGM3 2413 aaPredicted RBP5.41□□□□□ -1.54
ATM-226ENST00000638443 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms