RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ATOX1O00244 68 aa4.46□□□□□ -1.7
PNKP-229ENST00000637897 LINC00483Q53H64 154 aa4.46□□□□□ -1.7
PNKP-229ENST00000637897 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
PNKP-229ENST00000637897 BPY2O14599 106 aa4.45□□□□□ -1.7
PNKP-229ENST00000637897 A0A087WVE0 104 aa4.44□□□□□ -1.7
PNKP-229ENST00000637897 KRTAP4-1Q9BYQ7 146 aa4.44□□□□□ -1.7
PNKP-229ENST00000637897 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
PNKP-229ENST00000637897 IGLV7-46A0A075B6I9 117 aa4.42□□□□□ -1.7
PNKP-229ENST00000637897 C9orf153Q5TBE3 101 aa4.41□□□□□ -1.7
PNKP-229ENST00000637897 SMIM20Q8N5G0 67 aa4.41□□□□□ -1.7
PNKP-229ENST00000637897 A0A087WSZ3 146 aa4.4□□□□□ -1.71
PNKP-229ENST00000637897 IGLV9-49A0A0B4J1Y8 123 aa4.4□□□□□ -1.71
PNKP-229ENST00000637897 A0A0G2JQZ4 141 aa4.4□□□□□ -1.71
PNKP-229ENST00000637897 UQCRQO14949 82 aa4.4□□□□□ -1.71
PNKP-229ENST00000637897 IGKV4-1P06312 121 aa4.4□□□□□ -1.71
PNKP-229ENST00000637897 COX7CP15954 63 aa4.4□□□□□ -1.71
PNKP-229ENST00000637897 LORP23490 312 aaPredicted RBP4.4□□□□□ -1.71
PNKP-229ENST00000637897 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.71
PNKP-229ENST00000637897 SERP2Q8N6R1 65 aa4.4□□□□□ -1.71
PNKP-229ENST00000637897 CCDC179H3BU77 68 aa4.38□□□□□ -1.71
PNKP-229ENST00000637897 MOBPQ13875 183 aa4.38□□□□□ -1.71
PNKP-229ENST00000637897 SS18L2Q9UHA2 77 aa4.38□□□□□ -1.71
PNKP-229ENST00000637897 TRAV7A0A075B6U4 112 aa4.37□□□□□ -1.71
PNKP-229ENST00000637897 J3KT08 172 aa4.37□□□□□ -1.71
PNKP-229ENST00000637897 DSCR10P59022 87 aa4.37□□□□□ -1.71
PNKP-229ENST00000637897 SPAG11AQ6PDA7 123 aa4.37□□□□□ -1.71
PNKP-229ENST00000637897 SSBP3-AS1Q7Z2R9 100 aa4.36□□□□□ -1.71
PNKP-229ENST00000637897 Q8N9L7 120 aa4.36□□□□□ -1.71
PNKP-229ENST00000637897 CD164Q04900 197 aa4.35□□□□□ -1.71
PNKP-229ENST00000637897 FP248Q71RG6 208 aaPredicted RBP4.35□□□□□ -1.71
PNKP-229ENST00000637897 LINC00472Q9H8W2 130 aa4.35□□□□□ -1.71
PNKP-229ENST00000637897 K7EQZ3 153 aa4.34□□□□□ -1.71
PNKP-229ENST00000637897 SPINK1P00995 79 aa4.34□□□□□ -1.71
PNKP-229ENST00000637897 KRTAP19-2Q3LHN2 52 aa4.34□□□□□ -1.71
PNKP-229ENST00000637897 ASB16-AS1Q495Z4 193 aa4.34□□□□□ -1.71
PNKP-229ENST00000637897 A0A0U1RQV1 116 aa4.33□□□□□ -1.72
PNKP-229ENST00000637897 A8MWP4 228 aa4.33□□□□□ -1.72
PNKP-229ENST00000637897 H3BS24 57 aa4.33□□□□□ -1.72
PNKP-229ENST00000637897 HCG22E2RYF7 251 aa4.32□□□□□ -1.72
PNKP-229ENST00000637897 NDUFB1O75438 58 aa4.32□□□□□ -1.72
PNKP-229ENST00000637897 RPS29P62273 56 aaKnown RBP4.32□□□□□ -1.72
PNKP-229ENST00000637897 DEFB116Q30KQ4 102 aa4.32□□□□□ -1.72
PNKP-229ENST00000637897 PRR15Q8IV56 129 aa4.32□□□□□ -1.72
PNKP-229ENST00000637897 XP32Q5T750 250 aa4.31□□□□□ -1.72
PNKP-229ENST00000637897 HRCT1Q6UXD1 115 aa4.31□□□□□ -1.72
PNKP-229ENST00000637897 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
PNKP-229ENST00000637897 Q96NJ1 140 aa4.3□□□□□ -1.72
PNKP-229ENST00000637897 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
PNKP-229ENST00000637897 KLKP1Q107X0 134 aa4.28□□□□□ -1.72
PNKP-229ENST00000637897 Q5XG85 94 aa4.28□□□□□ -1.72
PNKP-229ENST00000637897 CASC2Q6XLA1 102 aa4.28□□□□□ -1.72
PNKP-229ENST00000637897 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
PNKP-229ENST00000637897 WFDC13Q8IUB5 93 aa4.27□□□□□ -1.73
PNKP-229ENST00000637897 A0A1B0GVX0 72 aa4.26□□□□□ -1.73
PNKP-229ENST00000637897 NDUFC1O43677 76 aa4.26□□□□□ -1.73
PNKP-229ENST00000637897 TMEM258P61165 79 aa4.26□□□□□ -1.73
PNKP-229ENST00000637897 TMEM254Q8TBM7 123 aa4.26□□□□□ -1.73
PNKP-229ENST00000637897 LIMD2Q9BT23 127 aa4.26□□□□□ -1.73
PNKP-229ENST00000637897 MMP24-AS1A0A0U1RRL7 71 aa4.25□□□□□ -1.73
PNKP-229ENST00000637897 C5orf47Q569G3 176 aa4.25□□□□□ -1.73
PNKP-229ENST00000637897 hDV103S1A0JD37 113 aa4.24□□□□□ -1.73
PNKP-229ENST00000637897 C8orf17Q9NRJ1 99 aa4.24□□□□□ -1.73
PNKP-229ENST00000637897 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
PNKP-229ENST00000637897 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
PNKP-229ENST00000637897 CYSTM1Q9H1C7 97 aa4.23□□□□□ -1.73
PNKP-229ENST00000637897 IGHV6-1A0A0B4J1U7 121 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 C9orf92A6NGG3 77 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 C8orf87E5RJ46 101 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 H7BZZ5 65 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 MP68P56378 58 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 MT1HP80294 61 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 PCOTHQ58A44 107 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 C1orf195Q5TG92 126 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 SNURFQ9Y675 71 aa4.22□□□□□ -1.73
PNKP-229ENST00000637897 H3BPC8 53 aa4.21□□□□□ -1.74
PNKP-229ENST00000637897 ATP5EP56381 51 aaPredicted RBP4.2□□□□□ -1.74
PNKP-229ENST00000637897 MRPL34Q9BQ48 92 aaKnown RBP4.2□□□□□ -1.74
PNKP-229ENST00000637897 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
PNKP-229ENST00000637897 FAM236DA0A1B0GTK5 79 aa4.18□□□□□ -1.74
PNKP-229ENST00000637897 H0Y9P7 68 aa4.18□□□□□ -1.74
PNKP-229ENST00000637897 FAM236CP0DP71 79 aa4.18□□□□□ -1.74
PNKP-229ENST00000637897 ZCCHC13Q8WW36 166 aaKnown RBP4.18□□□□□ -1.74
PNKP-229ENST00000637897 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
PNKP-229ENST00000637897 NDUFS5O43920 106 aa4.17□□□□□ -1.74
PNKP-229ENST00000637897 LINC00313P59037 77 aa4.17□□□□□ -1.74
PNKP-229ENST00000637897 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
PNKP-229ENST00000637897 LINC00208Q96KT6 92 aa4.16□□□□□ -1.74
PNKP-229ENST00000637897 NOTCH2NLQ7Z3S9 236 aa4.15□□□□□ -1.75
PNKP-229ENST00000637897 RPL37P61927 97 aaKnown RBP4.14□□□□□ -1.75
PNKP-229ENST00000637897 C1orf64Q8NEQ6 169 aa4.14□□□□□ -1.75
PNKP-229ENST00000637897 KRTAP10-6P60371 365 aaPredicted RBP4.13□□□□□ -1.75
PNKP-229ENST00000637897 SERP1Q9Y6X1 66 aa4.13□□□□□ -1.75
PNKP-229ENST00000637897 Q8N9P0 234 aaPredicted RBP4.12□□□□□ -1.75
PNKP-229ENST00000637897 LOC101927531A0A1B0GV80 90 aa4.1□□□□□ -1.75
PNKP-229ENST00000637897 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
PNKP-229ENST00000637897 SPANXA2-OT1Q8N9U9 137 aa4.1□□□□□ -1.75
PNKP-229ENST00000637897 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
PNKP-229ENST00000637897 Q5W150 140 aa4.06□□□□□ -1.76
PNKP-229ENST00000637897 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms