RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 FAM236CP0DP71 79 aa8.96□□□□□ -0.98
CLN6-212ENST00000636020 SMCPP49901 116 aaPredicted RBP8.95□□□□□ -0.98
CLN6-212ENST00000636020 H3BT86 120 aa8.94□□□□□ -0.98
CLN6-212ENST00000636020 ORMDL1Q9P0S3 153 aa8.94□□□□□ -0.98
CLN6-212ENST00000636020 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
CLN6-212ENST00000636020 Q96NJ1 140 aa8.93□□□□□ -0.98
CLN6-212ENST00000636020 F8W1H4 67 aa8.92□□□□□ -0.98
CLN6-212ENST00000636020 BAALC-AS2P0C853 105 aa8.92□□□□□ -0.98
CLN6-212ENST00000636020 OCIAD2Q56VL3 154 aa8.92□□□□□ -0.98
CLN6-212ENST00000636020 ANKRD29Q8N6D5 301 aa8.91□□□□□ -0.98
CLN6-212ENST00000636020 A8MUU9 505 aa8.89□□□□□ -0.99
CLN6-212ENST00000636020 H3BQ85 93 aa8.89□□□□□ -0.99
CLN6-212ENST00000636020 PPDPFLQ8WWR9 84 aa8.88□□□□□ -0.99
CLN6-212ENST00000636020 TMEM256-PLSCR3K7ERE1 68 aa8.87□□□□□ -0.99
CLN6-212ENST00000636020 GHRHP01286 108 aa8.87□□□□□ -0.99
CLN6-212ENST00000636020 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
CLN6-212ENST00000636020 MPLKIPQ8TAP9 179 aa8.87□□□□□ -0.99
CLN6-212ENST00000636020 RBM12B-AS1Q9P1G2 102 aa8.83□□□□□ -1
CLN6-212ENST00000636020 TRBV7-7A0A0K0K1E9 115 aa8.82□□□□□ -1
CLN6-212ENST00000636020 ETDBQ3ZM63 59 aa8.82□□□□□ -1
CLN6-212ENST00000636020 TEN1Q86WV5 123 aa8.82□□□□□ -1
CLN6-212ENST00000636020 KRTAP16-1A8MUX0 517 aa8.81□□□□□ -1
CLN6-212ENST00000636020 HRES1P13985 223 aa8.81□□□□□ -1
CLN6-212ENST00000636020 NDUFV3P56181 108 aaKnown RBP8.81□□□□□ -1
CLN6-212ENST00000636020 MDN1Q9NU22 5596 aa8.8□□□□□ -1
CLN6-212ENST00000636020 JMJD7-PLA2G4BH0Y9G9 81 aa8.77□□□□□ -1.01
CLN6-212ENST00000636020 A0A1B0GV72 72 aa8.75□□□□□ -1.01
CLN6-212ENST00000636020 F8WEM9 126 aa8.74□□□□□ -1.01
CLN6-212ENST00000636020 RBM3P98179 157 aaKnown RBP8.73□□□□□ -1.01
CLN6-212ENST00000636020 Q6JHZ5 121 aa8.73□□□□□ -1.01
CLN6-212ENST00000636020 C14orf132Q9NPU4 83 aa8.73□□□□□ -1.01
CLN6-212ENST00000636020 TRBV7-4A0A0J9YYF1 115 aa8.72□□□□□ -1.01
CLN6-212ENST00000636020 Q8N9P0 234 aaPredicted RBP8.72□□□□□ -1.01
CLN6-212ENST00000636020 KMT2DO14686 5537 aa8.71□□□□□ -1.01
CLN6-212ENST00000636020 LOC110117498A0A087WWA1 95 aa8.7□□□□□ -1.02
CLN6-212ENST00000636020 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
CLN6-212ENST00000636020 Q6ZQT0 140 aa8.69□□□□□ -1.02
CLN6-212ENST00000636020 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
CLN6-212ENST00000636020 A8MWP4 228 aa8.67□□□□□ -1.02
CLN6-212ENST00000636020 CCKP06307 115 aa8.65□□□□□ -1.02
CLN6-212ENST00000636020 PDE6GP18545 87 aa8.65□□□□□ -1.02
CLN6-212ENST00000636020 A0A1W2PNM2 257 aa8.63□□□□□ -1.03
CLN6-212ENST00000636020 KRTAP2-3P0C7H8 128 aa8.62□□□□□ -1.03
CLN6-212ENST00000636020 DSCR10P59022 87 aa8.62□□□□□ -1.03
CLN6-212ENST00000636020 C21orf62-AS1Q17RA5 79 aa8.62□□□□□ -1.03
CLN6-212ENST00000636020 KRTAP2-4Q9BYR9 128 aa8.62□□□□□ -1.03
CLN6-212ENST00000636020 KRTAP5-9P26371 169 aa8.61□□□□□ -1.03
CLN6-212ENST00000636020 FAM240AA0A1B0GVK7 77 aa8.58□□□□□ -1.04
CLN6-212ENST00000636020 J3QR89 54 aa8.58□□□□□ -1.04
CLN6-212ENST00000636020 VPS25Q9BRG1 176 aa8.58□□□□□ -1.04
CLN6-212ENST00000636020 K7ERU9 68 aa8.57□□□□□ -1.04
CLN6-212ENST00000636020 SS18L2Q9UHA2 77 aa8.56□□□□□ -1.04
CLN6-212ENST00000636020 A0A1B0GW54 56 aa8.55□□□□□ -1.04
CLN6-212ENST00000636020 ACYP1P07311 99 aa8.54□□□□□ -1.04
CLN6-212ENST00000636020 A6NN06 94 aa8.53□□□□□ -1.04
CLN6-212ENST00000636020 A0A087WSZ3 146 aa8.5□□□□□ -1.05
CLN6-212ENST00000636020 LINC00313P59037 77 aa8.5□□□□□ -1.05
CLN6-212ENST00000636020 Q6ZVQ6 151 aa8.46□□□□□ -1.06
CLN6-212ENST00000636020 UBL5Q9BZL1 73 aa8.44□□□□□ -1.06
CLN6-212ENST00000636020 NREPQ16612 68 aa8.42□□□□□ -1.06
CLN6-212ENST00000636020 SIGMAR1Q99720 223 aa8.42□□□□□ -1.06
CLN6-212ENST00000636020 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
CLN6-212ENST00000636020 LINC00472Q9H8W2 130 aa8.39□□□□□ -1.07
CLN6-212ENST00000636020 SPINK7P58062 85 aa8.38□□□□□ -1.07
CLN6-212ENST00000636020 MT1BP07438 61 aa8.34□□□□□ -1.07
CLN6-212ENST00000636020 ATP5EP2Q5VTU8 51 aa8.34□□□□□ -1.07
CLN6-212ENST00000636020 BPY2O14599 106 aa8.33□□□□□ -1.08
CLN6-212ENST00000636020 CXCL6P80162 114 aa8.33□□□□□ -1.08
CLN6-212ENST00000636020 DEFB116Q30KQ4 102 aa8.33□□□□□ -1.08
CLN6-212ENST00000636020 IGKV3D-7A0A0C4DH55 119 aa8.32□□□□□ -1.08
CLN6-212ENST00000636020 IGKV4-1P06312 121 aa8.32□□□□□ -1.08
CLN6-212ENST00000636020 J3KT08 172 aa8.31□□□□□ -1.08
CLN6-212ENST00000636020 KRTAP10-5P60370 271 aa8.31□□□□□ -1.08
CLN6-212ENST00000636020 MT-ATP8P03928 68 aa8.3□□□□□ -1.08
CLN6-212ENST00000636020 WFDC13Q8IUB5 93 aa8.29□□□□□ -1.08
CLN6-212ENST00000636020 ZCCHC13Q8WW36 166 aaKnown RBP8.29□□□□□ -1.08
CLN6-212ENST00000636020 KRTAP2-2Q9BYT5 123 aa8.29□□□□□ -1.08
CLN6-212ENST00000636020 KRTAP2-1Q9BYU5 128 aa8.29□□□□□ -1.08
CLN6-212ENST00000636020 K7EQZ3 153 aa8.25□□□□□ -1.09
CLN6-212ENST00000636020 Q8N9L7 120 aa8.25□□□□□ -1.09
CLN6-212ENST00000636020 GPR98Q8WXG9 6306 aa8.25□□□□□ -1.09
CLN6-212ENST00000636020 IGHV6-1A0A0B4J1U7 121 aa8.24□□□□□ -1.09
CLN6-212ENST00000636020 Q5VV11 94 aa8.23□□□□□ -1.09
CLN6-212ENST00000636020 A0A1B0GVX0 72 aa8.22□□□□□ -1.09
CLN6-212ENST00000636020 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
CLN6-212ENST00000636020 IMUPQ9GZP8 106 aa8.22□□□□□ -1.09
CLN6-212ENST00000636020 SPRR2EP22531 72 aa8.21□□□□□ -1.1
CLN6-212ENST00000636020 SPRR2BP35325 72 aa8.21□□□□□ -1.1
CLN6-212ENST00000636020 SPRR2AP35326 72 aa8.21□□□□□ -1.1
CLN6-212ENST00000636020 NDUFB1O75438 58 aa8.2□□□□□ -1.1
CLN6-212ENST00000636020 HIST1H4AP62805 103 aaKnown RBP8.19□□□□□ -1.1
CLN6-212ENST00000636020 KRTAP19-8Q3LI54 63 aa8.19□□□□□ -1.1
CLN6-212ENST00000636020 A0A087WVE0 104 aa8.18□□□□□ -1.1
CLN6-212ENST00000636020 H1FX-AS1Q4G0G2 97 aa8.18□□□□□ -1.1
CLN6-212ENST00000636020 MMP24-AS1A0A0U1RRL7 71 aa8.16□□□□□ -1.1
CLN6-212ENST00000636020 C8orf87E5RJ46 101 aa8.15□□□□□ -1.1
CLN6-212ENST00000636020 C8orf17Q9NRJ1 99 aa8.15□□□□□ -1.1
CLN6-212ENST00000636020 SPRR2FQ96RM1 72 aa8.13□□□□□ -1.11
CLN6-212ENST00000636020 HCG22E2RYF7 251 aa8.12□□□□□ -1.11
CLN6-212ENST00000636020 SPRR2GQ9BYE4 73 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 299 ms