RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 NEBP20929 6669 aa9.65□□□□□ -0.86
TARDBP-228ENST00000629725 PSMB2P49721 201 aa9.64□□□□□ -0.87
TARDBP-228ENST00000629725 DEFB116Q30KQ4 102 aa9.64□□□□□ -0.87
TARDBP-228ENST00000629725 H3BQ85 93 aa9.63□□□□□ -0.87
TARDBP-228ENST00000629725 K7ERJ3 54 aa9.62□□□□□ -0.87
TARDBP-228ENST00000629725 IGHV6-1A0A0B4J1U7 121 aa9.61□□□□□ -0.87
TARDBP-228ENST00000629725 TMEM256-PLSCR3K7ERE1 68 aa9.61□□□□□ -0.87
TARDBP-228ENST00000629725 CCKP06307 115 aa9.61□□□□□ -0.87
TARDBP-228ENST00000629725 LINC00472Q9H8W2 130 aa9.61□□□□□ -0.87
TARDBP-228ENST00000629725 TRACP01848 142 aa9.6□□□□□ -0.87
TARDBP-228ENST00000629725 HSD52Q0P140 79 aa9.6□□□□□ -0.87
TARDBP-228ENST00000629725 COX6CP09669 75 aa9.59□□□□□ -0.87
TARDBP-228ENST00000629725 SPINK7P58062 85 aa9.58□□□□□ -0.88
TARDBP-228ENST00000629725 MUC12Q9UKN1 5478 aa9.58□□□□□ -0.88
TARDBP-228ENST00000629725 UBE2V1Q13404 147 aa9.55□□□□□ -0.88
TARDBP-228ENST00000629725 ZCCHC13Q8WW36 166 aaKnown RBP9.54□□□□□ -0.88
TARDBP-228ENST00000629725 SMIM6P0DI80 62 aa9.53□□□□□ -0.88
TARDBP-228ENST00000629725 VPS25Q9BRG1 176 aa9.53□□□□□ -0.88
TARDBP-228ENST00000629725 LOC105371267A0A1B0GV96 52 aa9.51□□□□□ -0.89
TARDBP-228ENST00000629725 C8orf87E5RJ46 101 aa9.5□□□□□ -0.89
TARDBP-228ENST00000629725 A0A1B0GVX0 72 aa9.49□□□□□ -0.89
TARDBP-228ENST00000629725 RBM3P98179 157 aaKnown RBP9.48□□□□□ -0.89
TARDBP-228ENST00000629725 WFDC13Q8IUB5 93 aa9.48□□□□□ -0.89
TARDBP-228ENST00000629725 KRTAP20-1Q3LI63 56 aa9.46□□□□□ -0.9
TARDBP-228ENST00000629725 DSCR8Q96T75 97 aa9.46□□□□□ -0.9
TARDBP-228ENST00000629725 UQCR10Q9UDW1 63 aa9.46□□□□□ -0.9
TARDBP-228ENST00000629725 SCGB1C2P0DMR2 95 aa9.45□□□□□ -0.9
TARDBP-228ENST00000629725 C9JAW5 83 aa9.4□□□□□ -0.9
TARDBP-228ENST00000629725 J3KT08 172 aa9.4□□□□□ -0.9
TARDBP-228ENST00000629725 BAALC-AS2P0C853 105 aa9.39□□□□□ -0.91
TARDBP-228ENST00000629725 C21orf62-AS1Q17RA5 79 aa9.38□□□□□ -0.91
TARDBP-228ENST00000629725 Q6ZQT0 140 aa9.37□□□□□ -0.91
TARDBP-228ENST00000629725 NDUFB1O75438 58 aa9.34□□□□□ -0.91
TARDBP-228ENST00000629725 A6NN06 94 aa9.33□□□□□ -0.92
TARDBP-228ENST00000629725 LYRM7Q5U5X0 104 aa9.33□□□□□ -0.92
TARDBP-228ENST00000629725 TSTD3H0UI37 97 aa9.32□□□□□ -0.92
TARDBP-228ENST00000629725 H1FX-AS1Q4G0G2 97 aa9.31□□□□□ -0.92
TARDBP-228ENST00000629725 C8orf17Q9NRJ1 99 aa9.29□□□□□ -0.92
TARDBP-228ENST00000629725 JMJD7-PLA2G4BH0Y9G9 81 aa9.26□□□□□ -0.93
TARDBP-228ENST00000629725 LOC110117498A0A087WWA1 95 aa9.25□□□□□ -0.93
TARDBP-228ENST00000629725 IGKV3D-7A0A0C4DH55 119 aa9.25□□□□□ -0.93
TARDBP-228ENST00000629725 M0R143 59 aa9.25□□□□□ -0.93
TARDBP-228ENST00000629725 ATXN8Q156A1 80 aa9.25□□□□□ -0.93
TARDBP-228ENST00000629725 NAA38Q9BRA0 125 aaKnown RBP9.25□□□□□ -0.93
TARDBP-228ENST00000629725 A0A1B0GW54 56 aa9.24□□□□□ -0.93
TARDBP-228ENST00000629725 Q6ZVQ6 151 aa9.22□□□□□ -0.93
TARDBP-228ENST00000629725 MDN1Q9NU22 5596 aa9.22□□□□□ -0.93
TARDBP-228ENST00000629725 C14orf132Q9NPU4 83 aa9.21□□□□□ -0.94
TARDBP-228ENST00000629725 PDE6GP18545 87 aa9.2□□□□□ -0.94
TARDBP-228ENST00000629725 KRTAP5-9P26371 169 aa9.19□□□□□ -0.94
TARDBP-228ENST00000629725 PRR15Q8IV56 129 aa9.18□□□□□ -0.94
TARDBP-228ENST00000629725 KRTAP3-3Q9BYR6 98 aa9.18□□□□□ -0.94
TARDBP-228ENST00000629725 KRTAP3-2Q9BYR7 98 aa9.18□□□□□ -0.94
TARDBP-228ENST00000629725 KMT2DO14686 5537 aa9.18□□□□□ -0.94
TARDBP-228ENST00000629725 MT1BP07438 61 aa9.16□□□□□ -0.94
TARDBP-228ENST00000629725 NREPQ16612 68 aa9.15□□□□□ -0.94
TARDBP-228ENST00000629725 Q5VV11 94 aa9.14□□□□□ -0.95
TARDBP-228ENST00000629725 MMP24-AS1A0A0U1RRL7 71 aa9.13□□□□□ -0.95
TARDBP-228ENST00000629725 TMEM254Q8TBM7 123 aa9.12□□□□□ -0.95
TARDBP-228ENST00000629725 MRPL34Q9BQ48 92 aaKnown RBP9.12□□□□□ -0.95
TARDBP-228ENST00000629725 FAM236AA0A1B0GUQ0 79 aa9.09□□□□□ -0.95
TARDBP-228ENST00000629725 FAM236BA0A1B0GV22 79 aa9.09□□□□□ -0.95
TARDBP-228ENST00000629725 KRTAP10-5P60370 271 aa9.08□□□□□ -0.96
TARDBP-228ENST00000629725 NDUFS5O43920 106 aa9.07□□□□□ -0.96
TARDBP-228ENST00000629725 hDV103S1A0JD37 113 aa9.06□□□□□ -0.96
TARDBP-228ENST00000629725 K7EQZ3 153 aa9.06□□□□□ -0.96
TARDBP-228ENST00000629725 KRTAP2-3P0C7H8 128 aa9.05□□□□□ -0.96
TARDBP-228ENST00000629725 BATFQ16520 125 aa9.05□□□□□ -0.96
TARDBP-228ENST00000629725 KRTAP2-4Q9BYR9 128 aa9.05□□□□□ -0.96
TARDBP-228ENST00000629725 KRTAP19-8Q3LI54 63 aa9.04□□□□□ -0.96
TARDBP-228ENST00000629725 IGKV2D-30A0A075B6S6 120 aa9.01□□□□□ -0.97
TARDBP-228ENST00000629725 IGKV2-30P06310 120 aa9.01□□□□□ -0.97
TARDBP-228ENST00000629725 SPRR2GQ9BYE4 73 aa9.01□□□□□ -0.97
TARDBP-228ENST00000629725 TAX1BP3O14907 124 aa8.99□□□□□ -0.97
TARDBP-228ENST00000629725 C5orf47Q569G3 176 aa8.99□□□□□ -0.97
TARDBP-228ENST00000629725 C9orf118A6NHY6 69 aa8.98□□□□□ -0.97
TARDBP-228ENST00000629725 Q5W150 140 aa8.97□□□□□ -0.97
TARDBP-228ENST00000629725 C7orf65Q6ZTY9 151 aa8.97□□□□□ -0.97
TARDBP-228ENST00000629725 H3BT86 120 aa8.96□□□□□ -0.98
TARDBP-228ENST00000629725 BPY2O14599 106 aa8.96□□□□□ -0.98
TARDBP-228ENST00000629725 COL5A1-AS1Q5SY13 56 aa8.95□□□□□ -0.98
TARDBP-228ENST00000629725 A0A1W2PPM0 123 aa8.92□□□□□ -0.98
TARDBP-228ENST00000629725 PCP4L1A6NKN8 68 aa8.92□□□□□ -0.98
TARDBP-228ENST00000629725 C4orf26Q17RF5 130 aa8.92□□□□□ -0.98
TARDBP-228ENST00000629725 Q8N9L7 120 aa8.9□□□□□ -0.98
TARDBP-228ENST00000629725 CASC2Q6XLA1 102 aa8.89□□□□□ -0.99
TARDBP-228ENST00000629725 HCG22E2RYF7 251 aa8.87□□□□□ -0.99
TARDBP-228ENST00000629725 IMUPQ9GZP8 106 aa8.86□□□□□ -0.99
TARDBP-228ENST00000629725 CSAG1Q6PB30 78 aa8.84□□□□□ -0.99
TARDBP-228ENST00000629725 S4R3F8 94 aa8.83□□□□□ -1
TARDBP-228ENST00000629725 SPCS1Q9Y6A9 102 aa8.81□□□□□ -1
TARDBP-228ENST00000629725 SPRR2EP22531 72 aa8.8□□□□□ -1
TARDBP-228ENST00000629725 SPRR2BP35325 72 aa8.8□□□□□ -1
TARDBP-228ENST00000629725 SPRR2AP35326 72 aa8.8□□□□□ -1
TARDBP-228ENST00000629725 CXCL6P80162 114 aa8.8□□□□□ -1
TARDBP-228ENST00000629725 KLKP1Q107X0 134 aa8.8□□□□□ -1
TARDBP-228ENST00000629725 SPRR2FQ96RM1 72 aa8.79□□□□□ -1
TARDBP-228ENST00000629725 LCA10Q71F78 164 aa8.76□□□□□ -1.01
TARDBP-228ENST00000629725 KRTAP3-1Q9BYR8 98 aa8.76□□□□□ -1.01
TARDBP-228ENST00000629725 K7EP34 96 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms