RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 TPRXLQ17RH7 258 aa9.77□□□□□ -0.85
SPTAN1-217ENST00000629089 IGKV3D-7A0A0C4DH55 119 aa9.75□□□□□ -0.85
SPTAN1-217ENST00000629089 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
SPTAN1-217ENST00000629089 CXCL6P80162 114 aa9.74□□□□□ -0.85
SPTAN1-217ENST00000629089 LINC00643Q86TS7 51 aa9.74□□□□□ -0.85
SPTAN1-217ENST00000629089 K7EQZ3 153 aa9.73□□□□□ -0.85
SPTAN1-217ENST00000629089 PRR15Q8IV56 129 aa9.73□□□□□ -0.85
SPTAN1-217ENST00000629089 Q8N9L7 120 aa9.72□□□□□ -0.85
SPTAN1-217ENST00000629089 LINC00313P59037 77 aa9.72□□□□□ -0.85
SPTAN1-217ENST00000629089 ATP5EP2Q5VTU8 51 aa9.72□□□□□ -0.85
SPTAN1-217ENST00000629089 CDIP1Q9H305 208 aa9.72□□□□□ -0.85
SPTAN1-217ENST00000629089 C8orf87E5RJ46 101 aa9.7□□□□□ -0.86
SPTAN1-217ENST00000629089 NOTCH2NLQ7Z3S9 236 aa9.68□□□□□ -0.86
SPTAN1-217ENST00000629089 C8orf17Q9NRJ1 99 aa9.66□□□□□ -0.86
SPTAN1-217ENST00000629089 LPAP08519 4548 aa9.64□□□□□ -0.87
SPTAN1-217ENST00000629089 HMCN2Q8NDA2 5059 aa9.63□□□□□ -0.87
SPTAN1-217ENST00000629089 XP32Q5T750 250 aa9.63□□□□□ -0.87
SPTAN1-217ENST00000629089 MMP24-AS1A0A0U1RRL7 71 aa9.62□□□□□ -0.87
SPTAN1-217ENST00000629089 HIST1H4AP62805 103 aaKnown RBP9.62□□□□□ -0.87
SPTAN1-217ENST00000629089 hDV103S1A0JD37 113 aa9.59□□□□□ -0.87
SPTAN1-217ENST00000629089 KRTAP16-1A8MUX0 517 aa9.59□□□□□ -0.87
SPTAN1-217ENST00000629089 WFDC13Q8IUB5 93 aa9.58□□□□□ -0.88
SPTAN1-217ENST00000629089 HCG22E2RYF7 251 aa9.57□□□□□ -0.88
SPTAN1-217ENST00000629089 CASC2Q6XLA1 102 aa9.56□□□□□ -0.88
SPTAN1-217ENST00000629089 TMEM254Q8TBM7 123 aa9.56□□□□□ -0.88
SPTAN1-217ENST00000629089 MRPL34Q9BQ48 92 aaKnown RBP9.55□□□□□ -0.88
SPTAN1-217ENST00000629089 MT-ATP8P03928 68 aa9.54□□□□□ -0.88
SPTAN1-217ENST00000629089 C20orf166-AS1Q96NR2 134 aa9.54□□□□□ -0.88
SPTAN1-217ENST00000629089 Q75L30 129 aa9.53□□□□□ -0.88
SPTAN1-217ENST00000629089 A0A087WVE0 104 aa9.52□□□□□ -0.88
SPTAN1-217ENST00000629089 A8MUU9 505 aa9.52□□□□□ -0.88
SPTAN1-217ENST00000629089 RPL37P61927 97 aaKnown RBP9.52□□□□□ -0.88
SPTAN1-217ENST00000629089 LRP2P98164 4655 aa9.5□□□□□ -0.89
SPTAN1-217ENST00000629089 Q8N9P0 234 aaPredicted RBP9.5□□□□□ -0.89
SPTAN1-217ENST00000629089 NDUFS5O43920 106 aa9.49□□□□□ -0.89
SPTAN1-217ENST00000629089 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
SPTAN1-217ENST00000629089 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.9
SPTAN1-217ENST00000629089 ATP11AUNQ6ZP68 121 aa9.46□□□□□ -0.9
SPTAN1-217ENST00000629089 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
SPTAN1-217ENST00000629089 ZCCHC13Q8WW36 166 aaKnown RBP9.37□□□□□ -0.91
SPTAN1-217ENST00000629089 SCGB1A1P11684 91 aa9.35□□□□□ -0.91
SPTAN1-217ENST00000629089 TP53AIP1Q9HCN2 124 aa9.35□□□□□ -0.91
SPTAN1-217ENST00000629089 FAM236AA0A1B0GUQ0 79 aa9.33□□□□□ -0.92
SPTAN1-217ENST00000629089 FAM236BA0A1B0GV22 79 aa9.33□□□□□ -0.92
SPTAN1-217ENST00000629089 MUC17Q685J3 4493 aa9.31□□□□□ -0.92
SPTAN1-217ENST00000629089 Q5W150 140 aa9.29□□□□□ -0.92
SPTAN1-217ENST00000629089 UBR4Q5T4S7 5183 aa9.27□□□□□ -0.93
SPTAN1-217ENST00000629089 UQCRQO14949 82 aa9.26□□□□□ -0.93
SPTAN1-217ENST00000629089 OCR1Q9BZK8 76 aa9.25□□□□□ -0.93
SPTAN1-217ENST00000629089 TRAV22A0A0B4J277 110 aa9.22□□□□□ -0.93
SPTAN1-217ENST00000629089 KRTAP4-1Q9BYQ7 146 aa9.22□□□□□ -0.93
SPTAN1-217ENST00000629089 ATOX1O00244 68 aa9.21□□□□□ -0.94
SPTAN1-217ENST00000629089 SMIM20Q8N5G0 67 aa9.2□□□□□ -0.94
SPTAN1-217ENST00000629089 H0Y9P7 68 aa9.18□□□□□ -0.94
SPTAN1-217ENST00000629089 SPINK7P58062 85 aa9.18□□□□□ -0.94
SPTAN1-217ENST00000629089 IGKV2D-30A0A075B6S6 120 aa9.17□□□□□ -0.94
SPTAN1-217ENST00000629089 IGKV2-30P06310 120 aa9.17□□□□□ -0.94
SPTAN1-217ENST00000629089 C5orf47Q569G3 176 aa9.15□□□□□ -0.95
SPTAN1-217ENST00000629089 C7orf65Q6ZTY9 151 aa9.15□□□□□ -0.95
SPTAN1-217ENST00000629089 TRAV7A0A075B6U4 112 aa9.14□□□□□ -0.95
SPTAN1-217ENST00000629089 MP68P56378 58 aa9.14□□□□□ -0.95
SPTAN1-217ENST00000629089 RNF213Q63HN8 5207 aa9.11□□□□□ -0.95
SPTAN1-217ENST00000629089 MUC2Q02817 5179 aa9.1□□□□□ -0.95
SPTAN1-217ENST00000629089 LOC101927531A0A1B0GV80 90 aa9.09□□□□□ -0.95
SPTAN1-217ENST00000629089 LINC00208Q96KT6 92 aa9.09□□□□□ -0.95
SPTAN1-217ENST00000629089 C1orf64Q8NEQ6 169 aa9.08□□□□□ -0.96
SPTAN1-217ENST00000629089 SERP2Q8N6R1 65 aa9.06□□□□□ -0.96
SPTAN1-217ENST00000629089 HRES1P13985 223 aa9.05□□□□□ -0.96
SPTAN1-217ENST00000629089 H3BPC8 53 aa9.05□□□□□ -0.96
SPTAN1-217ENST00000629089 CYP4F30PQ9H0H9 118 aa9.05□□□□□ -0.96
SPTAN1-217ENST00000629089 RBM12B-AS1Q9P1G2 102 aa9.01□□□□□ -0.97
SPTAN1-217ENST00000629089 ANAPC13Q9BS18 74 aa9□□□□□ -0.97
SPTAN1-217ENST00000629089 MPLKIPQ8TAP9 179 aa8.97□□□□□ -0.97
SPTAN1-217ENST00000629089 A0A0U1RQV1 116 aa8.96□□□□□ -0.97
SPTAN1-217ENST00000629089 FAM236DA0A1B0GTK5 79 aa8.96□□□□□ -0.97
SPTAN1-217ENST00000629089 FAM236CP0DP71 79 aa8.96□□□□□ -0.97
SPTAN1-217ENST00000629089 COX7CP15954 63 aa8.96□□□□□ -0.97
SPTAN1-217ENST00000629089 COX6B2Q6YFQ2 88 aa8.96□□□□□ -0.97
SPTAN1-217ENST00000629089 C4orf26Q17RF5 130 aa8.95□□□□□ -0.98
SPTAN1-217ENST00000629089 C20orf197Q8N268 126 aa8.95□□□□□ -0.98
SPTAN1-217ENST00000629089 KLKP1Q107X0 134 aa8.93□□□□□ -0.98
SPTAN1-217ENST00000629089 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
SPTAN1-217ENST00000629089 KRTAP19-2Q3LHN2 52 aa8.91□□□□□ -0.98
SPTAN1-217ENST00000629089 LCE2CQ5TA81 110 aa8.84□□□□□ -0.99
SPTAN1-217ENST00000629089 H1FX-AS1Q4G0G2 97 aa8.79□□□□□ -1
SPTAN1-217ENST00000629089 CCDC179H3BU77 68 aa8.78□□□□□ -1
SPTAN1-217ENST00000629089 KRTAP3-1Q9BYR8 98 aa8.78□□□□□ -1
SPTAN1-217ENST00000629089 FAT4Q6V0I7 4981 aa8.76□□□□□ -1.01
SPTAN1-217ENST00000629089 NDUFC1O43677 76 aa8.74□□□□□ -1.01
SPTAN1-217ENST00000629089 A8MUN3 132 aa8.72□□□□□ -1.01
SPTAN1-217ENST00000629089 MT1HP80294 61 aa8.72□□□□□ -1.01
SPTAN1-217ENST00000629089 CYSTM1Q9H1C7 97 aa8.72□□□□□ -1.01
SPTAN1-217ENST00000629089 SPANXA2-OT1Q8N9U9 137 aa8.69□□□□□ -1.02
SPTAN1-217ENST00000629089 H7BZZ5 65 aa8.68□□□□□ -1.02
SPTAN1-217ENST00000629089 M0R2T5 61 aa8.68□□□□□ -1.02
SPTAN1-217ENST00000629089 DMAC1Q96GE9 116 aa8.68□□□□□ -1.02
SPTAN1-217ENST00000629089 S4R3F8 94 aa8.65□□□□□ -1.02
SPTAN1-217ENST00000629089 FLGP20930 4061 aaPredicted RBP8.63□□□□□ -1.03
SPTAN1-217ENST00000629089 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
SPTAN1-217ENST00000629089 ACYP2P14621 99 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms