RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 LYRM7Q5U5X0 104 aa3.46□□□□□ -1.86
TCF4-249ENST00000625716 Q6Q795 121 aa3.46□□□□□ -1.86
TCF4-249ENST00000625716 ORMDL1Q9P0S3 153 aa3.46□□□□□ -1.86
TCF4-249ENST00000625716 TMEM256-PLSCR3K7ERE1 68 aa3.45□□□□□ -1.86
TCF4-249ENST00000625716 KRTAP4-1Q9BYQ7 146 aa3.45□□□□□ -1.86
TCF4-249ENST00000625716 A0A087WSZ3 146 aa3.44□□□□□ -1.86
TCF4-249ENST00000625716 RPL37P61927 97 aaKnown RBP3.44□□□□□ -1.86
TCF4-249ENST00000625716 ANKRD29Q8N6D5 301 aa3.44□□□□□ -1.86
TCF4-249ENST00000625716 TRBV20-1A0A075B6N2 111 aa3.43□□□□□ -1.86
TCF4-249ENST00000625716 A0A1B0GV72 72 aa3.43□□□□□ -1.86
TCF4-249ENST00000625716 TRACP01848 142 aa3.43□□□□□ -1.86
TCF4-249ENST00000625716 ATP11AUNQ6ZP68 121 aa3.43□□□□□ -1.86
TCF4-249ENST00000625716 OBSCN-AS1Q96MR7 158 aa3.43□□□□□ -1.86
TCF4-249ENST00000625716 BATFQ16520 125 aa3.42□□□□□ -1.86
TCF4-249ENST00000625716 COL5A1-AS1Q5SY13 56 aa3.42□□□□□ -1.86
TCF4-249ENST00000625716 Q96NJ1 140 aa3.42□□□□□ -1.86
TCF4-249ENST00000625716 UBE2V1Q13404 147 aa3.41□□□□□ -1.86
TCF4-249ENST00000625716 ATXN8Q156A1 80 aa3.41□□□□□ -1.86
TCF4-249ENST00000625716 SIGMAR1Q99720 223 aa3.41□□□□□ -1.86
TCF4-249ENST00000625716 TRBV7-4A0A0J9YYF1 115 aa3.4□□□□□ -1.87
TCF4-249ENST00000625716 A0A1W2PNM2 257 aa3.4□□□□□ -1.87
TCF4-249ENST00000625716 CCKP06307 115 aa3.4□□□□□ -1.87
TCF4-249ENST00000625716 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
TCF4-249ENST00000625716 RBM3P98179 157 aaKnown RBP3.4□□□□□ -1.87
TCF4-249ENST00000625716 DSCR8Q96T75 97 aa3.4□□□□□ -1.87
TCF4-249ENST00000625716 VPS25Q9BRG1 176 aa3.4□□□□□ -1.87
TCF4-249ENST00000625716 A0A1W2PPM0 123 aa3.39□□□□□ -1.87
TCF4-249ENST00000625716 TAX1BP3O14907 124 aa3.39□□□□□ -1.87
TCF4-249ENST00000625716 IGKV4-1P06312 121 aa3.39□□□□□ -1.87
TCF4-249ENST00000625716 BAALC-AS2P0C853 105 aa3.39□□□□□ -1.87
TCF4-249ENST00000625716 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
TCF4-249ENST00000625716 Q75L30 129 aa3.39□□□□□ -1.87
TCF4-249ENST00000625716 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
TCF4-249ENST00000625716 PCP4L1A6NKN8 68 aa3.38□□□□□ -1.87
TCF4-249ENST00000625716 C9JAW5 83 aa3.37□□□□□ -1.87
TCF4-249ENST00000625716 DSCR10P59022 87 aa3.37□□□□□ -1.87
TCF4-249ENST00000625716 LINC00313P59037 77 aa3.37□□□□□ -1.87
TCF4-249ENST00000625716 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
TCF4-249ENST00000625716 DEFB116Q30KQ4 102 aa3.36□□□□□ -1.87
TCF4-249ENST00000625716 IGHV6-1A0A0B4J1U7 121 aa3.35□□□□□ -1.87
TCF4-249ENST00000625716 A8MUU9 505 aa3.35□□□□□ -1.87
TCF4-249ENST00000625716 JMJD7-PLA2G4BH0Y9G9 81 aa3.35□□□□□ -1.87
TCF4-249ENST00000625716 H3BT86 120 aa3.35□□□□□ -1.87
TCF4-249ENST00000625716 M0R2T5 61 aa3.35□□□□□ -1.87
TCF4-249ENST00000625716 C20orf166-AS1Q96NR2 134 aa3.35□□□□□ -1.87
TCF4-249ENST00000625716 NAA38Q9BRA0 125 aaKnown RBP3.35□□□□□ -1.87
TCF4-249ENST00000625716 A0A1B0GW54 56 aa3.34□□□□□ -1.87
TCF4-249ENST00000625716 PDE6GP18545 87 aa3.34□□□□□ -1.87
TCF4-249ENST00000625716 GTF2H5Q6ZYL4 71 aa3.34□□□□□ -1.87
TCF4-249ENST00000625716 LINC00472Q9H8W2 130 aa3.34□□□□□ -1.87
TCF4-249ENST00000625716 SPCS1Q9Y6A9 102 aa3.34□□□□□ -1.87
TCF4-249ENST00000625716 J3KT08 172 aa3.33□□□□□ -1.88
TCF4-249ENST00000625716 NDUFB1O75438 58 aa3.33□□□□□ -1.88
TCF4-249ENST00000625716 MT1HP80294 61 aa3.33□□□□□ -1.88
TCF4-249ENST00000625716 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
TCF4-249ENST00000625716 A0A1B0GVX0 72 aa3.32□□□□□ -1.88
TCF4-249ENST00000625716 C8orf87E5RJ46 101 aa3.32□□□□□ -1.88
TCF4-249ENST00000625716 K7EP34 96 aa3.32□□□□□ -1.88
TCF4-249ENST00000625716 LOC110117498A0A087WWA1 95 aa3.31□□□□□ -1.88
TCF4-249ENST00000625716 Q6ZQT0 140 aa3.31□□□□□ -1.88
TCF4-249ENST00000625716 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
TCF4-249ENST00000625716 F8W1H4 67 aa3.3□□□□□ -1.88
TCF4-249ENST00000625716 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
TCF4-249ENST00000625716 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
TCF4-249ENST00000625716 C14orf132Q9NPU4 83 aa3.3□□□□□ -1.88
TCF4-249ENST00000625716 KRTAP16-1A8MUX0 517 aa3.29□□□□□ -1.88
TCF4-249ENST00000625716 NREPQ16612 68 aa3.29□□□□□ -1.88
TCF4-249ENST00000625716 FAM236DA0A1B0GTK5 79 aa3.28□□□□□ -1.88
TCF4-249ENST00000625716 FAM236CP0DP71 79 aa3.28□□□□□ -1.88
TCF4-249ENST00000625716 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
TCF4-249ENST00000625716 PRO0461Q9UI25 63 aa3.28□□□□□ -1.88
TCF4-249ENST00000625716 A8MWP4 228 aa3.27□□□□□ -1.89
TCF4-249ENST00000625716 RBM12B-AS1Q9P1G2 102 aa3.27□□□□□ -1.89
TCF4-249ENST00000625716 C8orf17Q9NRJ1 99 aa3.26□□□□□ -1.89
TCF4-249ENST00000625716 MTURNQ8N3F0 131 aa3.25□□□□□ -1.89
TCF4-249ENST00000625716 ZCCHC13Q8WW36 166 aaKnown RBP3.25□□□□□ -1.89
TCF4-249ENST00000625716 IGKV3D-7A0A0C4DH55 119 aa3.24□□□□□ -1.89
TCF4-249ENST00000625716 Q6ZVQ6 151 aa3.24□□□□□ -1.89
TCF4-249ENST00000625716 PRR15Q8IV56 129 aa3.24□□□□□ -1.89
TCF4-249ENST00000625716 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
TCF4-249ENST00000625716 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
TCF4-249ENST00000625716 BPY2O14599 106 aa3.22□□□□□ -1.89
TCF4-249ENST00000625716 NDUFS5O43920 106 aa3.22□□□□□ -1.89
TCF4-249ENST00000625716 SPINK7P58062 85 aa3.22□□□□□ -1.89
TCF4-249ENST00000625716 A0A1B0GV90 55 aa3.21□□□□□ -1.9
TCF4-249ENST00000625716 ACYP1P07311 99 aa3.21□□□□□ -1.9
TCF4-249ENST00000625716 HRES1P13985 223 aa3.21□□□□□ -1.9
TCF4-249ENST00000625716 ETDBQ3ZM63 59 aa3.21□□□□□ -1.9
TCF4-249ENST00000625716 TMEM254Q8TBM7 123 aa3.21□□□□□ -1.9
TCF4-249ENST00000625716 MRPL34Q9BQ48 92 aaKnown RBP3.21□□□□□ -1.9
TCF4-249ENST00000625716 hDV103S1A0JD37 113 aa3.2□□□□□ -1.9
TCF4-249ENST00000625716 UBL5Q9BZL1 73 aa3.2□□□□□ -1.9
TCF4-249ENST00000625716 MMP24-AS1A0A0U1RRL7 71 aa3.19□□□□□ -1.9
TCF4-249ENST00000625716 FAM240AA0A1B0GVK7 77 aa3.19□□□□□ -1.9
TCF4-249ENST00000625716 K7EQZ3 153 aa3.19□□□□□ -1.9
TCF4-249ENST00000625716 CRCT1Q9UGL9 99 aa3.19□□□□□ -1.9
TCF4-249ENST00000625716 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
TCF4-249ENST00000625716 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
TCF4-249ENST00000625716 J3QR89 54 aa3.17□□□□□ -1.9
TCF4-249ENST00000625716 CASC2Q6XLA1 102 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms