RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 IGLV7-46A0A075B6I9 117 aa6.69□□□□□ -1.34
VARS2-213ENST00000625423 C1orf195Q5TG92 126 aa6.69□□□□□ -1.34
VARS2-213ENST00000625423 V9GYY9 64 aa6.69□□□□□ -1.34
VARS2-213ENST00000625423 SEC61GP60059 68 aa6.68□□□□□ -1.34
VARS2-213ENST00000625423 CD164Q04900 197 aa6.68□□□□□ -1.34
VARS2-213ENST00000625423 SPINK6Q6UWN8 80 aa6.68□□□□□ -1.34
VARS2-213ENST00000625423 MRPL34Q9BQ48 92 aaKnown RBP6.68□□□□□ -1.34
VARS2-213ENST00000625423 C1orf134Q5TEV5 83 aa6.67□□□□□ -1.34
VARS2-213ENST00000625423 Q8N9P0 234 aaPredicted RBP6.67□□□□□ -1.34
VARS2-213ENST00000625423 COA5Q86WW8 74 aa6.67□□□□□ -1.34
VARS2-213ENST00000625423 Q5VV11 94 aa6.65□□□□□ -1.34
VARS2-213ENST00000625423 IGLV7-43P04211 117 aa6.65□□□□□ -1.35
VARS2-213ENST00000625423 A8MU10 97 aa6.65□□□□□ -1.35
VARS2-213ENST00000625423 CHKB-CPT1BH3BT56 60 aa6.65□□□□□ -1.35
VARS2-213ENST00000625423 CIRBP-AS1Q8TBR5 109 aa6.64□□□□□ -1.35
VARS2-213ENST00000625423 LIMD2Q9BT23 127 aa6.63□□□□□ -1.35
VARS2-213ENST00000625423 PRR15LQ9BU68 103 aa6.62□□□□□ -1.35
VARS2-213ENST00000625423 RETNLBQ9BQ08 111 aa6.61□□□□□ -1.35
VARS2-213ENST00000625423 ALMS1Q8TCU4 4167 aa6.6□□□□□ -1.35
VARS2-213ENST00000625423 DNAH11Q96DT5 4516 aa6.6□□□□□ -1.35
VARS2-213ENST00000625423 DNAH6Q9C0G6 4158 aa6.6□□□□□ -1.35
VARS2-213ENST00000625423 Q5W150 140 aa6.59□□□□□ -1.35
VARS2-213ENST00000625423 PMAIP1Q13794 54 aa6.58□□□□□ -1.36
VARS2-213ENST00000625423 DNAH5Q8TE73 4624 aa6.58□□□□□ -1.36
VARS2-213ENST00000625423 A6NED7 52 aa6.57□□□□□ -1.36
VARS2-213ENST00000625423 SPAG11AQ6PDA7 123 aa6.57□□□□□ -1.36
VARS2-213ENST00000625423 KRTAP10-2P60368 255 aa6.57□□□□□ -1.36
VARS2-213ENST00000625423 HRES1P13985 223 aa6.56□□□□□ -1.36
VARS2-213ENST00000625423 SSBP3-AS1Q7Z2R9 100 aa6.56□□□□□ -1.36
VARS2-213ENST00000625423 LOC101927531A0A1B0GV80 90 aa6.55□□□□□ -1.36
VARS2-213ENST00000625423 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
VARS2-213ENST00000625423 Q75L30 129 aa6.53□□□□□ -1.36
VARS2-213ENST00000625423 C8orf87E5RJ46 101 aa6.52□□□□□ -1.37
VARS2-213ENST00000625423 LRP1BQ9NZR2 4599 aa6.52□□□□□ -1.37
VARS2-213ENST00000625423 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
VARS2-213ENST00000625423 KRTAP13-2Q52LG2 175 aa6.51□□□□□ -1.37
VARS2-213ENST00000625423 LINC00313P59037 77 aa6.5□□□□□ -1.37
VARS2-213ENST00000625423 LCA10Q71F78 164 aa6.49□□□□□ -1.37
VARS2-213ENST00000625423 KRTAP10-1P60331 282 aa6.48□□□□□ -1.37
VARS2-213ENST00000625423 PRR26Q8N8Z3 221 aa6.47□□□□□ -1.37
VARS2-213ENST00000625423 Q6ZSA8 131 aa6.45□□□□□ -1.38
VARS2-213ENST00000625423 PKD1P98161 4303 aa6.45□□□□□ -1.38
VARS2-213ENST00000625423 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
VARS2-213ENST00000625423 ACYP2P14621 99 aa6.44□□□□□ -1.38
VARS2-213ENST00000625423 HYDINQ4G0P3 5121 aa6.43□□□□□ -1.38
VARS2-213ENST00000625423 FAT2Q9NYQ8 4349 aa6.43□□□□□ -1.38
VARS2-213ENST00000625423 KRTAP1-4P0C5Y4 121 aa6.42□□□□□ -1.38
VARS2-213ENST00000625423 SPINK7P58062 85 aa6.42□□□□□ -1.38
VARS2-213ENST00000625423 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
VARS2-213ENST00000625423 ATP11AUNQ6ZP68 121 aa6.41□□□□□ -1.38
VARS2-213ENST00000625423 KRTAP16-1A8MUX0 517 aa6.41□□□□□ -1.38
VARS2-213ENST00000625423 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
VARS2-213ENST00000625423 IGKV2-30P06310 120 aa6.4□□□□□ -1.38
VARS2-213ENST00000625423 VPS13BQ7Z7G8 4022 aa6.4□□□□□ -1.39
VARS2-213ENST00000625423 SMR3BP02814 79 aaPredicted RBP6.37□□□□□ -1.39
VARS2-213ENST00000625423 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
VARS2-213ENST00000625423 SPINK1P00995 79 aa6.35□□□□□ -1.39
VARS2-213ENST00000625423 C4orf48Q5BLP8 95 aa6.35□□□□□ -1.39
VARS2-213ENST00000625423 IGKV2D-30A0A075B6S6 120 aa6.35□□□□□ -1.39
VARS2-213ENST00000625423 DMBT1Q9UGM3 2413 aaPredicted RBP6.35□□□□□ -1.39
VARS2-213ENST00000625423 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
VARS2-213ENST00000625423 A6NN06 94 aa6.33□□□□□ -1.4
VARS2-213ENST00000625423 KTN1-AS1Q86SY8 53 aa6.31□□□□□ -1.4
VARS2-213ENST00000625423 A0A1B0GU69 56 aa6.28□□□□□ -1.4
VARS2-213ENST00000625423 FLG2Q5D862 2391 aaPredicted RBP6.28□□□□□ -1.4
VARS2-213ENST00000625423 C7orf65Q6ZTY9 151 aa6.27□□□□□ -1.4
VARS2-213ENST00000625423 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
VARS2-213ENST00000625423 LINC00304Q8N9R0 145 aa6.24□□□□□ -1.41
VARS2-213ENST00000625423 PRAC1Q96KF2 57 aa6.24□□□□□ -1.41
VARS2-213ENST00000625423 SACSQ9NZJ4 4579 aa6.22□□□□□ -1.41
VARS2-213ENST00000625423 Q8N1X5 172 aa6.2□□□□□ -1.42
VARS2-213ENST00000625423 DYNC1H1Q14204 4646 aaKnown RBP6.2□□□□□ -1.42
VARS2-213ENST00000625423 RBM12B-AS1Q9P1G2 102 aa6.2□□□□□ -1.42
VARS2-213ENST00000625423 RPS29P62273 56 aaKnown RBP6.19□□□□□ -1.42
VARS2-213ENST00000625423 FAT1Q14517 4588 aa6.18□□□□□ -1.42
VARS2-213ENST00000625423 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
VARS2-213ENST00000625423 ADM2Q7Z4H4 148 aa6.17□□□□□ -1.42
VARS2-213ENST00000625423 C9orf92A6NGG3 77 aa6.17□□□□□ -1.42
VARS2-213ENST00000625423 UQCR11O14957 56 aa6.17□□□□□ -1.42
VARS2-213ENST00000625423 MIR22HGQ0VDD5 57 aa6.16□□□□□ -1.42
VARS2-213ENST00000625423 APOBP04114 4563 aaKnown RBP6.11□□□□□ -1.43
VARS2-213ENST00000625423 C20orf166-AS1Q96NR2 134 aa6.1□□□□□ -1.43
VARS2-213ENST00000625423 PKHD1L1Q86WI1 4243 aa6.1□□□□□ -1.43
VARS2-213ENST00000625423 A8MUU9 505 aa6.1□□□□□ -1.43
VARS2-213ENST00000625423 KRTAP10-4P60372 401 aaPredicted RBP6.09□□□□□ -1.43
VARS2-213ENST00000625423 RYR3Q15413 4870 aa6.09□□□□□ -1.43
VARS2-213ENST00000625423 A0A1B0GVY2 172 aa6.07□□□□□ -1.44
VARS2-213ENST00000625423 KMT2CQ8NEZ4 4911 aaKnown RBP6.07□□□□□ -1.44
VARS2-213ENST00000625423 KRTAP3-1Q9BYR8 98 aa6.05□□□□□ -1.44
VARS2-213ENST00000625423 H3BS24 57 aa6.03□□□□□ -1.44
VARS2-213ENST00000625423 CRIPTQ9P021 101 aa6.01□□□□□ -1.45
VARS2-213ENST00000625423 RYR2Q92736 4967 aa5.99□□□□□ -1.45
VARS2-213ENST00000625423 Q5VSD8 79 aa5.98□□□□□ -1.45
VARS2-213ENST00000625423 H0YAA0 97 aa5.97□□□□□ -1.45
VARS2-213ENST00000625423 CSAG1Q6PB30 78 aa5.95□□□□□ -1.46
VARS2-213ENST00000625423 FAT3Q8TDW7 4589 aa5.94□□□□□ -1.46
VARS2-213ENST00000625423 A0A1B0GU33 70 aa5.94□□□□□ -1.46
VARS2-213ENST00000625423 LRP1Q07954 4544 aaKnown RBP5.94□□□□□ -1.46
VARS2-213ENST00000625423 COX6B2Q6YFQ2 88 aa5.93□□□□□ -1.46
VARS2-213ENST00000625423 H1FX-AS1Q4G0G2 97 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms