RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 LINC00846Q9NV44 126 aa9.25□□□□□ -0.93
SMN1-211ENST00000625245 C8orf87E5RJ46 101 aa9.24□□□□□ -0.93
SMN1-211ENST00000625245 S100A1P23297 94 aa9.24□□□□□ -0.93
SMN1-211ENST00000625245 A0A1B0GVX0 72 aa9.23□□□□□ -0.93
SMN1-211ENST00000625245 VPS25Q9BRG1 176 aa9.23□□□□□ -0.93
SMN1-211ENST00000625245 SPINK7P58062 85 aa9.21□□□□□ -0.94
SMN1-211ENST00000625245 ZCCHC13Q8WW36 166 aaKnown RBP9.21□□□□□ -0.94
SMN1-211ENST00000625245 SYNE2Q8WXH0 6885 aaKnown RBP9.2□□□□□ -0.94
SMN1-211ENST00000625245 MACF1Q9UPN3 7388 aaKnown RBP9.19□□□□□ -0.94
SMN1-211ENST00000625245 COX6CP09669 75 aa9.18□□□□□ -0.94
SMN1-211ENST00000625245 K7ERJ3 54 aa9.17□□□□□ -0.94
SMN1-211ENST00000625245 UBE2V1Q13404 147 aa9.17□□□□□ -0.94
SMN1-211ENST00000625245 KRTAP19-6Q3LI70 58 aa9.17□□□□□ -0.94
SMN1-211ENST00000625245 A8MWP4 228 aa9.13□□□□□ -0.95
SMN1-211ENST00000625245 RBM3P98179 157 aaKnown RBP9.13□□□□□ -0.95
SMN1-211ENST00000625245 DSCR8Q96T75 97 aa9.12□□□□□ -0.95
SMN1-211ENST00000625245 J3KT08 172 aa9.11□□□□□ -0.95
SMN1-211ENST00000625245 HSD52Q0P140 79 aa9.11□□□□□ -0.95
SMN1-211ENST00000625245 LYRM7Q5U5X0 104 aa9.11□□□□□ -0.95
SMN1-211ENST00000625245 WFDC13Q8IUB5 93 aa9.1□□□□□ -0.95
SMN1-211ENST00000625245 NDUFB1O75438 58 aa9.08□□□□□ -0.96
SMN1-211ENST00000625245 Q8N9P0 234 aaPredicted RBP9.07□□□□□ -0.96
SMN1-211ENST00000625245 SCGB1C2P0DMR2 95 aa9.06□□□□□ -0.96
SMN1-211ENST00000625245 C9JAW5 83 aa9.05□□□□□ -0.96
SMN1-211ENST00000625245 C21orf62-AS1Q17RA5 79 aa9.04□□□□□ -0.96
SMN1-211ENST00000625245 Q6ZQT0 140 aa9.04□□□□□ -0.96
SMN1-211ENST00000625245 C8orf17Q9NRJ1 99 aa9.02□□□□□ -0.97
SMN1-211ENST00000625245 BAALC-AS2P0C853 105 aa9.01□□□□□ -0.97
SMN1-211ENST00000625245 IGKV3D-7A0A0C4DH55 119 aa8.95□□□□□ -0.98
SMN1-211ENST00000625245 KRTAP6-3Q3LI67 103 aa8.95□□□□□ -0.98
SMN1-211ENST00000625245 Q6ZVQ6 151 aa8.95□□□□□ -0.98
SMN1-211ENST00000625245 PYY3Q5JQD4 70 aa8.93□□□□□ -0.98
SMN1-211ENST00000625245 H1FX-AS1Q4G0G2 97 aa8.92□□□□□ -0.98
SMN1-211ENST00000625245 UQCR10Q9UDW1 63 aa8.91□□□□□ -0.98
SMN1-211ENST00000625245 JMJD7-PLA2G4BH0Y9G9 81 aa8.87□□□□□ -0.99
SMN1-211ENST00000625245 PRR15Q8IV56 129 aa8.87□□□□□ -0.99
SMN1-211ENST00000625245 A0A1B0GW54 56 aa8.86□□□□□ -0.99
SMN1-211ENST00000625245 LOC110117498A0A087WWA1 95 aa8.85□□□□□ -0.99
SMN1-211ENST00000625245 MRPL34Q9BQ48 92 aaKnown RBP8.85□□□□□ -0.99
SMN1-211ENST00000625245 TMEM254Q8TBM7 123 aa8.84□□□□□ -0.99
SMN1-211ENST00000625245 NDUFS5O43920 106 aa8.83□□□□□ -1
SMN1-211ENST00000625245 ATXN8Q156A1 80 aa8.83□□□□□ -1
SMN1-211ENST00000625245 MMP24-AS1A0A0U1RRL7 71 aa8.82□□□□□ -1
SMN1-211ENST00000625245 NREPQ16612 68 aa8.82□□□□□ -1
SMN1-211ENST00000625245 C14orf132Q9NPU4 83 aa8.82□□□□□ -1
SMN1-211ENST00000625245 PDE6GP18545 87 aa8.81□□□□□ -1
SMN1-211ENST00000625245 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
SMN1-211ENST00000625245 IGKV2-30P06310 120 aa8.79□□□□□ -1
SMN1-211ENST00000625245 NAA38Q9BRA0 125 aaKnown RBP8.79□□□□□ -1
SMN1-211ENST00000625245 SMCPP49901 116 aaPredicted RBP8.78□□□□□ -1
SMN1-211ENST00000625245 hDV103S1A0JD37 113 aa8.77□□□□□ -1.01
SMN1-211ENST00000625245 K7EQZ3 153 aa8.73□□□□□ -1.01
SMN1-211ENST00000625245 C7orf65Q6ZTY9 151 aa8.72□□□□□ -1.01
SMN1-211ENST00000625245 Q5W150 140 aa8.71□□□□□ -1.02
SMN1-211ENST00000625245 C4orf26Q17RF5 130 aa8.67□□□□□ -1.02
SMN1-211ENST00000625245 FAM236AA0A1B0GUQ0 79 aa8.66□□□□□ -1.02
SMN1-211ENST00000625245 FAM236BA0A1B0GV22 79 aa8.66□□□□□ -1.02
SMN1-211ENST00000625245 A6NN06 94 aa8.66□□□□□ -1.02
SMN1-211ENST00000625245 M0R143 59 aa8.66□□□□□ -1.02
SMN1-211ENST00000625245 NEBP20929 6669 aa8.65□□□□□ -1.02
SMN1-211ENST00000625245 C5orf47Q569G3 176 aa8.64□□□□□ -1.03
SMN1-211ENST00000625245 TMA7Q9Y2S6 64 aaKnown RBP8.63□□□□□ -1.03
SMN1-211ENST00000625245 BPY2O14599 106 aa8.62□□□□□ -1.03
SMN1-211ENST00000625245 HCG22E2RYF7 251 aa8.6□□□□□ -1.03
SMN1-211ENST00000625245 MT1BP07438 61 aa8.58□□□□□ -1.04
SMN1-211ENST00000625245 Q5VV11 94 aa8.58□□□□□ -1.04
SMN1-211ENST00000625245 CASC2Q6XLA1 102 aa8.58□□□□□ -1.04
SMN1-211ENST00000625245 Q8N9L7 120 aa8.56□□□□□ -1.04
SMN1-211ENST00000625245 MUC12Q9UKN1 5478 aa8.55□□□□□ -1.04
SMN1-211ENST00000625245 S4R3F8 94 aa8.53□□□□□ -1.04
SMN1-211ENST00000625245 CXCL6P80162 114 aa8.52□□□□□ -1.05
SMN1-211ENST00000625245 CSAG1Q6PB30 78 aa8.51□□□□□ -1.05
SMN1-211ENST00000625245 KRTAP19-8Q3LI54 63 aa8.5□□□□□ -1.05
SMN1-211ENST00000625245 H3BT86 120 aa8.49□□□□□ -1.05
SMN1-211ENST00000625245 KRTAP20-1Q3LI63 56 aa8.49□□□□□ -1.05
SMN1-211ENST00000625245 SPRR2GQ9BYE4 73 aa8.49□□□□□ -1.05
SMN1-211ENST00000625245 KRTAP3-1Q9BYR8 98 aa8.49□□□□□ -1.05
SMN1-211ENST00000625245 TSTD3H0UI37 97 aa8.48□□□□□ -1.05
SMN1-211ENST00000625245 BATFQ16520 125 aa8.47□□□□□ -1.05
SMN1-211ENST00000625245 KRTAP10-5P60370 271 aa8.46□□□□□ -1.06
SMN1-211ENST00000625245 C1orf64Q8NEQ6 169 aa8.46□□□□□ -1.06
SMN1-211ENST00000625245 LCA10Q71F78 164 aa8.45□□□□□ -1.06
SMN1-211ENST00000625245 KLKP1Q107X0 134 aa8.39□□□□□ -1.07
SMN1-211ENST00000625245 C9orf118A6NHY6 69 aa8.38□□□□□ -1.07
SMN1-211ENST00000625245 KRTAP5-9P26371 169 aa8.36□□□□□ -1.07
SMN1-211ENST00000625245 A0A1W2PPM0 123 aa8.35□□□□□ -1.07
SMN1-211ENST00000625245 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
SMN1-211ENST00000625245 TAX1BP3O14907 124 aa8.31□□□□□ -1.08
SMN1-211ENST00000625245 UBL5Q9BZL1 73 aa8.3□□□□□ -1.08
SMN1-211ENST00000625245 SMIM6P0DI80 62 aa8.28□□□□□ -1.08
SMN1-211ENST00000625245 KMT2DO14686 5537 aa8.28□□□□□ -1.08
SMN1-211ENST00000625245 MDN1Q9NU22 5596 aa8.24□□□□□ -1.09
SMN1-211ENST00000625245 TP53AIP1Q9HCN2 124 aa8.23□□□□□ -1.09
SMN1-211ENST00000625245 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
SMN1-211ENST00000625245 SPCS1Q9Y6A9 102 aa8.23□□□□□ -1.09
SMN1-211ENST00000625245 A0A087WVE0 104 aa8.18□□□□□ -1.1
SMN1-211ENST00000625245 KRTAP2-3P0C7H8 128 aa8.16□□□□□ -1.1
SMN1-211ENST00000625245 KRTAP2-4Q9BYR9 128 aa8.16□□□□□ -1.1
SMN1-211ENST00000625245 CYP4F30PQ9H0H9 118 aa8.15□□□□□ -1.1
SMN1-211ENST00000625245 SPRR2FQ96RM1 72 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms