RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 KRTAP13-1Q8IUC0 172 aa10.66□□□□□ -0.7
PCF11-207ENST00000624931 Q8N9P0 234 aaPredicted RBP10.66□□□□□ -0.7
PCF11-207ENST00000624931 A8MUN3 132 aa10.65□□□□□ -0.7
PCF11-207ENST00000624931 Q5VV11 94 aa10.64□□□□□ -0.71
PCF11-207ENST00000624931 Q6ZSA8 131 aa10.64□□□□□ -0.71
PCF11-207ENST00000624931 CIRBP-AS1Q8TBR5 109 aa10.64□□□□□ -0.71
PCF11-207ENST00000624931 PMAIP1Q13794 54 aa10.61□□□□□ -0.71
PCF11-207ENST00000624931 ZNF706Q9Y5V0 76 aaPredicted RBP10.61□□□□□ -0.71
PCF11-207ENST00000624931 PKHD1P08F94 4074 aa10.6□□□□□ -0.71
PCF11-207ENST00000624931 LINC00483Q53H64 154 aa10.6□□□□□ -0.71
PCF11-207ENST00000624931 RYR3Q15413 4870 aa10.6□□□□□ -0.71
PCF11-207ENST00000624931 COA5Q86WW8 74 aa10.58□□□□□ -0.72
PCF11-207ENST00000624931 LOC101927531A0A1B0GV80 90 aa10.58□□□□□ -0.72
PCF11-207ENST00000624931 C8orf17Q9NRJ1 99 aa10.58□□□□□ -0.72
PCF11-207ENST00000624931 PSORS1C2Q9UIG4 136 aa10.58□□□□□ -0.72
PCF11-207ENST00000624931 Q96NJ1 140 aa10.57□□□□□ -0.72
PCF11-207ENST00000624931 DYNC1H1Q14204 4646 aaKnown RBP10.57□□□□□ -0.72
PCF11-207ENST00000624931 Q75L30 129 aa10.56□□□□□ -0.72
PCF11-207ENST00000624931 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
PCF11-207ENST00000624931 LRP1BQ9NZR2 4599 aa10.55□□□□□ -0.72
PCF11-207ENST00000624931 CDK2AP2O75956 126 aa10.55□□□□□ -0.72
PCF11-207ENST00000624931 PRR15LQ9BU68 103 aa10.54□□□□□ -0.72
PCF11-207ENST00000624931 A0A1B0GVX0 72 aa10.53□□□□□ -0.72
PCF11-207ENST00000624931 IGLV9-49A0A0B4J1Y8 123 aa10.5□□□□□ -0.73
PCF11-207ENST00000624931 SEC61GP60059 68 aa10.49□□□□□ -0.73
PCF11-207ENST00000624931 MRPL34Q9BQ48 92 aaKnown RBP10.49□□□□□ -0.73
PCF11-207ENST00000624931 LINC01558Q9Y6Z2 57 aa10.49□□□□□ -0.73
PCF11-207ENST00000624931 CD164Q04900 197 aa10.47□□□□□ -0.73
PCF11-207ENST00000624931 ATP11AUNQ6ZP68 121 aa10.47□□□□□ -0.73
PCF11-207ENST00000624931 PCOTHQ58A44 107 aa10.45□□□□□ -0.74
PCF11-207ENST00000624931 SRRM2Q9UQ35 2752 aaKnown RBP10.44□□□□□ -0.74
PCF11-207ENST00000624931 IGHV6-1A0A0B4J1U7 121 aa10.43□□□□□ -0.74
PCF11-207ENST00000624931 NDUFS5O43920 106 aa10.43□□□□□ -0.74
PCF11-207ENST00000624931 IGLV7-43P04211 117 aa10.43□□□□□ -0.74
PCF11-207ENST00000624931 APOBP04114 4563 aaKnown RBP10.43□□□□□ -0.74
PCF11-207ENST00000624931 A6NED7 52 aa10.41□□□□□ -0.74
PCF11-207ENST00000624931 ZNF861PO60384 105 aa10.41□□□□□ -0.74
PCF11-207ENST00000624931 SMR3BP02814 79 aaPredicted RBP10.4□□□□□ -0.74
PCF11-207ENST00000624931 CDC42SE1Q9NRR8 79 aa10.4□□□□□ -0.74
PCF11-207ENST00000624931 LCA10Q71F78 164 aa10.35□□□□□ -0.75
PCF11-207ENST00000624931 HRES1P13985 223 aa10.34□□□□□ -0.75
PCF11-207ENST00000624931 ANAPC11Q9NYG5 84 aa10.34□□□□□ -0.75
PCF11-207ENST00000624931 C8orf87E5RJ46 101 aa10.33□□□□□ -0.76
PCF11-207ENST00000624931 KTN1-AS1Q86SY8 53 aa10.33□□□□□ -0.76
PCF11-207ENST00000624931 SPAG11AQ6PDA7 123 aa10.32□□□□□ -0.76
PCF11-207ENST00000624931 A8MU10 97 aa10.29□□□□□ -0.76
PCF11-207ENST00000624931 SPTSSBQ8NFR3 76 aa10.29□□□□□ -0.76
PCF11-207ENST00000624931 VPS13BQ7Z7G8 4022 aa10.29□□□□□ -0.76
PCF11-207ENST00000624931 ACYP2P14621 99 aa10.27□□□□□ -0.76
PCF11-207ENST00000624931 SSBP3-AS1Q7Z2R9 100 aa10.27□□□□□ -0.76
PCF11-207ENST00000624931 KRTAP13-3Q3SY46 172 aa10.26□□□□□ -0.77
PCF11-207ENST00000624931 FAT1Q14517 4588 aa10.26□□□□□ -0.77
PCF11-207ENST00000624931 A6NN06 94 aa10.24□□□□□ -0.77
PCF11-207ENST00000624931 KRTAP10-4P60372 401 aaPredicted RBP10.24□□□□□ -0.77
PCF11-207ENST00000624931 A0A087X002 238 aa10.24□□□□□ -0.77
PCF11-207ENST00000624931 NOTCH2NLQ7Z3S9 236 aa10.24□□□□□ -0.77
PCF11-207ENST00000624931 EPPK1P58107 5090 aaKnown RBP10.23□□□□□ -0.77
PCF11-207ENST00000624931 HSPG2P98160 4391 aa10.2□□□□□ -0.78
PCF11-207ENST00000624931 KRTAP17-1Q9BYP8 105 aa10.19□□□□□ -0.78
PCF11-207ENST00000624931 Q5W150 140 aa10.19□□□□□ -0.78
PCF11-207ENST00000624931 FAM229AH3BQW9 127 aa10.18□□□□□ -0.78
PCF11-207ENST00000624931 KRTAP1-4P0C5Y4 121 aa10.18□□□□□ -0.78
PCF11-207ENST00000624931 SPINK6Q6UWN8 80 aa10.17□□□□□ -0.78
PCF11-207ENST00000624931 DMAC1Q96GE9 116 aa10.16□□□□□ -0.78
PCF11-207ENST00000624931 RYR1P21817 5038 aa10.15□□□□□ -0.78
PCF11-207ENST00000624931 SPINK7P58062 85 aa10.14□□□□□ -0.79
PCF11-207ENST00000624931 C7orf65Q6ZTY9 151 aa10.14□□□□□ -0.79
PCF11-207ENST00000624931 LINC00313P59037 77 aa10.13□□□□□ -0.79
PCF11-207ENST00000624931 KRTAP13-2Q52LG2 175 aa10.13□□□□□ -0.79
PCF11-207ENST00000624931 Q5VSD8 79 aa10.13□□□□□ -0.79
PCF11-207ENST00000624931 KIAA1109Q2LD37 5005 aa10.12□□□□□ -0.79
PCF11-207ENST00000624931 PRR26Q8N8Z3 221 aa10.11□□□□□ -0.79
PCF11-207ENST00000624931 PLA2G1BP04054 148 aaKnown RBP10.09□□□□□ -0.79
PCF11-207ENST00000624931 IGKV2-30P06310 120 aa10.07□□□□□ -0.8
PCF11-207ENST00000624931 PKHD1L1Q86WI1 4243 aa10.07□□□□□ -0.8
PCF11-207ENST00000624931 RBM12B-AS1Q9P1G2 102 aa10.06□□□□□ -0.8
PCF11-207ENST00000624931 A0A1B0GU69 56 aa10.01□□□□□ -0.81
PCF11-207ENST00000624931 Q8N1X5 172 aa9.99□□□□□ -0.81
PCF11-207ENST00000624931 TYMSOSQ8TAI1 123 aa9.98□□□□□ -0.81
PCF11-207ENST00000624931 BIRC6Q9NR09 4857 aa9.97□□□□□ -0.81
PCF11-207ENST00000624931 SPATA8Q6RVD6 105 aa9.96□□□□□ -0.82
PCF11-207ENST00000624931 KRTAP16-1A8MUX0 517 aa9.93□□□□□ -0.82
PCF11-207ENST00000624931 KRTAP4-5Q9BYR2 181 aa9.9□□□□□ -0.82
PCF11-207ENST00000624931 UQCR11O14957 56 aa9.9□□□□□ -0.83
PCF11-207ENST00000624931 FLG2Q5D862 2391 aaPredicted RBP9.87□□□□□ -0.83
PCF11-207ENST00000624931 LRP1Q07954 4544 aaKnown RBP9.87□□□□□ -0.83
PCF11-207ENST00000624931 LINC00304Q8N9R0 145 aa9.87□□□□□ -0.83
PCF11-207ENST00000624931 MIR22HGQ0VDD5 57 aa9.85□□□□□ -0.83
PCF11-207ENST00000624931 IGKV2D-30A0A075B6S6 120 aa9.85□□□□□ -0.83
PCF11-207ENST00000624931 RETNLBQ9BQ08 111 aa9.85□□□□□ -0.83
PCF11-207ENST00000624931 C4orf48Q5BLP8 95 aa9.83□□□□□ -0.84
PCF11-207ENST00000624931 FAT3Q8TDW7 4589 aa9.81□□□□□ -0.84
PCF11-207ENST00000624931 SPINK1P00995 79 aa9.79□□□□□ -0.84
PCF11-207ENST00000624931 KRTAP10-8P60410 259 aa9.79□□□□□ -0.84
PCF11-207ENST00000624931 TNXBP22105 4242 aa9.77□□□□□ -0.85
PCF11-207ENST00000624931 MYCBP2O75592 4640 aa9.74□□□□□ -0.85
PCF11-207ENST00000624931 RPS29P62273 56 aaKnown RBP9.74□□□□□ -0.85
PCF11-207ENST00000624931 HERC2O95714 4834 aa9.74□□□□□ -0.85
PCF11-207ENST00000624931 MT1HL1P0DM35 61 aa9.73□□□□□ -0.85
PCF11-207ENST00000624931 ABCA13Q86UQ4 5058 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms