RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 HRES1P13985 223 aa5.26□□□□□ -1.57
VCL-207ENST00000624354 Q96NJ1 140 aa5.26□□□□□ -1.57
VCL-207ENST00000624354 H3BS24 57 aa5.26□□□□□ -1.57
VCL-207ENST00000624354 C8orf17Q9NRJ1 99 aa5.25□□□□□ -1.57
VCL-207ENST00000624354 ASB16-AS1Q495Z4 193 aa5.25□□□□□ -1.57
VCL-207ENST00000624354 LINC01554Q52M75 96 aa5.25□□□□□ -1.57
VCL-207ENST00000624354 CDK2AP2O75956 126 aa5.24□□□□□ -1.57
VCL-207ENST00000624354 KMT2AQ03164 3969 aa5.23□□□□□ -1.57
VCL-207ENST00000624354 IGHV6-1A0A0B4J1U7 121 aa5.23□□□□□ -1.57
VCL-207ENST00000624354 SPACA4Q8TDM5 124 aa5.23□□□□□ -1.57
VCL-207ENST00000624354 ZNF706Q9Y5V0 76 aaPredicted RBP5.23□□□□□ -1.57
VCL-207ENST00000624354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
VCL-207ENST00000624354 LINC00483Q53H64 154 aa5.23□□□□□ -1.57
VCL-207ENST00000624354 Q6ZRN7 208 aaPredicted RBP5.23□□□□□ -1.57
VCL-207ENST00000624354 DMBT1Q9UGM3 2413 aaPredicted RBP5.23□□□□□ -1.57
VCL-207ENST00000624354 A0A1B0GVX0 72 aa5.23□□□□□ -1.57
VCL-207ENST00000624354 Q6ZR54 194 aa5.23□□□□□ -1.57
VCL-207ENST00000624354 ADM2Q7Z4H4 148 aa5.23□□□□□ -1.57
VCL-207ENST00000624354 PLA2G1BP04054 148 aaKnown RBP5.22□□□□□ -1.57
VCL-207ENST00000624354 LY6G6CO95867 125 aa5.21□□□□□ -1.58
VCL-207ENST00000624354 WWC2-AS2Q96NR7 200 aa5.21□□□□□ -1.58
VCL-207ENST00000624354 MRPL34Q9BQ48 92 aaKnown RBP5.21□□□□□ -1.58
VCL-207ENST00000624354 FLG2Q5D862 2391 aaPredicted RBP5.2□□□□□ -1.58
VCL-207ENST00000624354 PRR26Q8N8Z3 221 aa5.2□□□□□ -1.58
VCL-207ENST00000624354 NUPR2A6NF83 97 aa5.2□□□□□ -1.58
VCL-207ENST00000624354 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
VCL-207ENST00000624354 PSORS1C2Q9UIG4 136 aa5.18□□□□□ -1.58
VCL-207ENST00000624354 IGLV5-52A0A0A0MRZ9 124 aa5.18□□□□□ -1.58
VCL-207ENST00000624354 A0A087WTM6 91 aa5.18□□□□□ -1.58
VCL-207ENST00000624354 ANAPC11Q9NYG5 84 aa5.18□□□□□ -1.58
VCL-207ENST00000624354 ZNF861PO60384 105 aa5.17□□□□□ -1.58
VCL-207ENST00000624354 RTL8CO15255 209 aa5.16□□□□□ -1.58
VCL-207ENST00000624354 A0A087X002 238 aa5.15□□□□□ -1.58
VCL-207ENST00000624354 NOTCH2NLQ7Z3S9 236 aa5.15□□□□□ -1.58
VCL-207ENST00000624354 SPINK6Q6UWN8 80 aa5.15□□□□□ -1.59
VCL-207ENST00000624354 HYDINQ4G0P3 5121 aa5.14□□□□□ -1.59
VCL-207ENST00000624354 ACYP2P14621 99 aa5.13□□□□□ -1.59
VCL-207ENST00000624354 DYNC2H1Q8NCM8 4307 aaKnown RBP5.13□□□□□ -1.59
VCL-207ENST00000624354 A0A1B0GU69 56 aa5.12□□□□□ -1.59
VCL-207ENST00000624354 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
VCL-207ENST00000624354 CIRBP-AS1Q8TBR5 109 aa5.11□□□□□ -1.59
VCL-207ENST00000624354 FRAS1Q86XX4 4008 aa5.11□□□□□ -1.59
VCL-207ENST00000624354 Q5W150 140 aa5.1□□□□□ -1.59
VCL-207ENST00000624354 KMT2CQ8NEZ4 4911 aaKnown RBP5.09□□□□□ -1.59
VCL-207ENST00000624354 MIR22HGQ0VDD5 57 aa5.09□□□□□ -1.59
VCL-207ENST00000624354 CSAG1Q6PB30 78 aa5.09□□□□□ -1.59
VCL-207ENST00000624354 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
VCL-207ENST00000624354 VPS13DQ5THJ4 4388 aa5.09□□□□□ -1.59
VCL-207ENST00000624354 KRTAP13-3Q3SY46 172 aa5.08□□□□□ -1.6
VCL-207ENST00000624354 UQCR11O14957 56 aa5.07□□□□□ -1.6
VCL-207ENST00000624354 SSBP3-AS1Q7Z2R9 100 aa5.07□□□□□ -1.6
VCL-207ENST00000624354 DNAH8Q96JB1 4490 aa5.06□□□□□ -1.6
VCL-207ENST00000624354 DNAH2Q9P225 4427 aa5.05□□□□□ -1.6
VCL-207ENST00000624354 C1orf134Q5TEV5 83 aa5.04□□□□□ -1.6
VCL-207ENST00000624354 DMAC1Q96GE9 116 aa5.04□□□□□ -1.6
VCL-207ENST00000624354 FAM229AH3BQW9 127 aa5.03□□□□□ -1.6
VCL-207ENST00000624354 ALMS1Q8TCU4 4167 aa5.02□□□□□ -1.61
VCL-207ENST00000624354 DNAH11Q96DT5 4516 aa5.01□□□□□ -1.61
VCL-207ENST00000624354 DNAH6Q9C0G6 4158 aa5.01□□□□□ -1.61
VCL-207ENST00000624354 HECTD4Q9Y4D8 3996 aa5□□□□□ -1.61
VCL-207ENST00000624354 DNAH17Q9UFH2 4485 aa5□□□□□ -1.61
VCL-207ENST00000624354 SPINK1P00995 79 aa4.98□□□□□ -1.61
VCL-207ENST00000624354 IGKV2-30P06310 120 aa4.98□□□□□ -1.61
VCL-207ENST00000624354 KRTAP10-2P60368 255 aa4.96□□□□□ -1.62
VCL-207ENST00000624354 SACSQ9NZJ4 4579 aa4.96□□□□□ -1.62
VCL-207ENST00000624354 PKHD1P08F94 4074 aa4.96□□□□□ -1.62
VCL-207ENST00000624354 KRTAP13-2Q52LG2 175 aa4.96□□□□□ -1.62
VCL-207ENST00000624354 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
VCL-207ENST00000624354 KRTAP16-1A8MUX0 517 aa4.93□□□□□ -1.62
VCL-207ENST00000624354 RYR3Q15413 4870 aa4.93□□□□□ -1.62
VCL-207ENST00000624354 SMR3BP02814 79 aaPredicted RBP4.92□□□□□ -1.62
VCL-207ENST00000624354 CRIPTQ9P021 101 aa4.9□□□□□ -1.62
VCL-207ENST00000624354 ROMO1P60602 79 aa4.9□□□□□ -1.62
VCL-207ENST00000624354 KRTAP25-1Q3LHN0 102 aa4.9□□□□□ -1.63
VCL-207ENST00000624354 FAT1Q14517 4588 aa4.89□□□□□ -1.63
VCL-207ENST00000624354 Q6ZSA8 131 aa4.89□□□□□ -1.63
VCL-207ENST00000624354 KRTAP1-4P0C5Y4 121 aa4.88□□□□□ -1.63
VCL-207ENST00000624354 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
VCL-207ENST00000624354 DNAH5Q8TE73 4624 aa4.86□□□□□ -1.63
VCL-207ENST00000624354 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
VCL-207ENST00000624354 TYMSOSQ8TAI1 123 aa4.86□□□□□ -1.63
VCL-207ENST00000624354 FAT2Q9NYQ8 4349 aa4.85□□□□□ -1.63
VCL-207ENST00000624354 A8MUU9 505 aa4.85□□□□□ -1.63
VCL-207ENST00000624354 LINC00304Q8N9R0 145 aa4.83□□□□□ -1.64
VCL-207ENST00000624354 RYR2Q92736 4967 aa4.83□□□□□ -1.64
VCL-207ENST00000624354 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
VCL-207ENST00000624354 EPPK1P58107 5090 aaKnown RBP4.81□□□□□ -1.64
VCL-207ENST00000624354 DYNC1H1Q14204 4646 aaKnown RBP4.81□□□□□ -1.64
VCL-207ENST00000624354 Q8N1X5 172 aa4.8□□□□□ -1.64
VCL-207ENST00000624354 H0YAA0 97 aa4.8□□□□□ -1.64
VCL-207ENST00000624354 PKD1P98161 4303 aa4.79□□□□□ -1.64
VCL-207ENST00000624354 RPS29P62273 56 aaKnown RBP4.77□□□□□ -1.65
VCL-207ENST00000624354 P0C880 135 aa4.75□□□□□ -1.65
VCL-207ENST00000624354 A0A1B0GU33 70 aa4.75□□□□□ -1.65
VCL-207ENST00000624354 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
VCL-207ENST00000624354 VPS13BQ7Z7G8 4022 aa4.74□□□□□ -1.65
VCL-207ENST00000624354 K7ERS5 55 aa4.72□□□□□ -1.65
VCL-207ENST00000624354 LRP1Q07954 4544 aaKnown RBP4.72□□□□□ -1.65
VCL-207ENST00000624354 C9orf92A6NGG3 77 aa4.71□□□□□ -1.66
VCL-207ENST00000624354 H1FX-AS1Q4G0G2 97 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms