RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 SPACA4Q8TDM5 124 aa7.83□□□□□ -1.16
CHD1L-210ENST00000622533 A0A087X002 238 aa7.82□□□□□ -1.16
CHD1L-210ENST00000622533 NOTCH2NLQ7Z3S9 236 aa7.82□□□□□ -1.16
CHD1L-210ENST00000622533 DNHD1Q96M86 4753 aa7.81□□□□□ -1.16
CHD1L-210ENST00000622533 MEGF8Q7Z7M0 2845 aa7.81□□□□□ -1.16
CHD1L-210ENST00000622533 CDK2AP2O75956 126 aa7.81□□□□□ -1.16
CHD1L-210ENST00000622533 Q6ZRN7 208 aaPredicted RBP7.81□□□□□ -1.16
CHD1L-210ENST00000622533 PANO1I0J062 215 aa7.8□□□□□ -1.16
CHD1L-210ENST00000622533 NUPR2A6NF83 97 aa7.8□□□□□ -1.16
CHD1L-210ENST00000622533 A0A1B0GVX0 72 aa7.79□□□□□ -1.16
CHD1L-210ENST00000622533 C4orf48Q5BLP8 95 aa7.79□□□□□ -1.16
CHD1L-210ENST00000622533 MRPL34Q9BQ48 92 aaKnown RBP7.77□□□□□ -1.17
CHD1L-210ENST00000622533 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
CHD1L-210ENST00000622533 Q5W150 140 aa7.75□□□□□ -1.17
CHD1L-210ENST00000622533 WWC2-AS2Q96NR7 200 aa7.75□□□□□ -1.17
CHD1L-210ENST00000622533 DNAH9Q9NYC9 4486 aa7.75□□□□□ -1.17
CHD1L-210ENST00000622533 IGLV5-52A0A0A0MRZ9 124 aa7.74□□□□□ -1.17
CHD1L-210ENST00000622533 PRKDCP78527 4128 aaKnown RBP7.73□□□□□ -1.17
CHD1L-210ENST00000622533 DYNC2H1Q8NCM8 4307 aaKnown RBP7.72□□□□□ -1.17
CHD1L-210ENST00000622533 ZNF861PO60384 105 aa7.72□□□□□ -1.17
CHD1L-210ENST00000622533 A0A087WTM6 91 aa7.72□□□□□ -1.17
CHD1L-210ENST00000622533 ANAPC11Q9NYG5 84 aa7.71□□□□□ -1.18
CHD1L-210ENST00000622533 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.18
CHD1L-210ENST00000622533 LINC01554Q52M75 96 aa7.7□□□□□ -1.18
CHD1L-210ENST00000622533 PLA2G1BP04054 148 aaKnown RBP7.69□□□□□ -1.18
CHD1L-210ENST00000622533 SPINK6Q6UWN8 80 aa7.69□□□□□ -1.18
CHD1L-210ENST00000622533 ALMS1Q8TCU4 4167 aa7.69□□□□□ -1.18
CHD1L-210ENST00000622533 RTL8CO15255 209 aa7.68□□□□□ -1.18
CHD1L-210ENST00000622533 ACYP2P14621 99 aa7.68□□□□□ -1.18
CHD1L-210ENST00000622533 PLECQ15149 4684 aaKnown RBP7.67□□□□□ -1.18
CHD1L-210ENST00000622533 A0A1B0GU69 56 aa7.66□□□□□ -1.18
CHD1L-210ENST00000622533 RETNLBQ9BQ08 111 aa7.65□□□□□ -1.18
CHD1L-210ENST00000622533 KMT2AQ03164 3969 aa7.65□□□□□ -1.19
CHD1L-210ENST00000622533 H3BS24 57 aa7.64□□□□□ -1.19
CHD1L-210ENST00000622533 KRTAP13-3Q3SY46 172 aa7.64□□□□□ -1.19
CHD1L-210ENST00000622533 FBN3Q75N90 2809 aa7.63□□□□□ -1.19
CHD1L-210ENST00000622533 SPATA8Q6RVD6 105 aa7.62□□□□□ -1.19
CHD1L-210ENST00000622533 STARD9Q9P2P6 4700 aa7.61□□□□□ -1.19
CHD1L-210ENST00000622533 IGLV7-43P04211 117 aa7.6□□□□□ -1.19
CHD1L-210ENST00000622533 MIR22HGQ0VDD5 57 aa7.6□□□□□ -1.19
CHD1L-210ENST00000622533 SSBP3-AS1Q7Z2R9 100 aa7.6□□□□□ -1.19
CHD1L-210ENST00000622533 DMAC1Q96GE9 116 aa7.59□□□□□ -1.19
CHD1L-210ENST00000622533 FRAS1Q86XX4 4008 aa7.59□□□□□ -1.19
CHD1L-210ENST00000622533 CSAG1Q6PB30 78 aa7.58□□□□□ -1.2
CHD1L-210ENST00000622533 CIRBP-AS1Q8TBR5 109 aa7.57□□□□□ -1.2
CHD1L-210ENST00000622533 UQCR11O14957 56 aa7.55□□□□□ -1.2
CHD1L-210ENST00000622533 C1orf134Q5TEV5 83 aa7.53□□□□□ -1.2
CHD1L-210ENST00000622533 DNAH8Q96JB1 4490 aa7.52□□□□□ -1.2
CHD1L-210ENST00000622533 FAM229AH3BQW9 127 aa7.52□□□□□ -1.21
CHD1L-210ENST00000622533 HECTD4Q9Y4D8 3996 aa7.51□□□□□ -1.21
CHD1L-210ENST00000622533 VPS13DQ5THJ4 4388 aa7.5□□□□□ -1.21
CHD1L-210ENST00000622533 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
CHD1L-210ENST00000622533 DNAH17Q9UFH2 4485 aa7.43□□□□□ -1.22
CHD1L-210ENST00000622533 IGKV2D-30A0A075B6S6 120 aa7.43□□□□□ -1.22
CHD1L-210ENST00000622533 SPINK1P00995 79 aa7.41□□□□□ -1.22
CHD1L-210ENST00000622533 LY6G6CO95867 125 aa7.41□□□□□ -1.22
CHD1L-210ENST00000622533 DNAH2Q9P225 4427 aa7.4□□□□□ -1.22
CHD1L-210ENST00000622533 DNAH6Q9C0G6 4158 aa7.39□□□□□ -1.23
CHD1L-210ENST00000622533 KRTAP13-2Q52LG2 175 aa7.38□□□□□ -1.23
CHD1L-210ENST00000622533 KRTAP16-1A8MUX0 517 aa7.36□□□□□ -1.23
CHD1L-210ENST00000622533 HYDINQ4G0P3 5121 aa7.34□□□□□ -1.23
CHD1L-210ENST00000622533 Q6ZSA8 131 aa7.33□□□□□ -1.24
CHD1L-210ENST00000622533 KRTAP10-2P60368 255 aa7.32□□□□□ -1.24
CHD1L-210ENST00000622533 FLG2Q5D862 2391 aaPredicted RBP7.31□□□□□ -1.24
CHD1L-210ENST00000622533 Q8N1X5 172 aa7.31□□□□□ -1.24
CHD1L-210ENST00000622533 DNAH11Q96DT5 4516 aa7.29□□□□□ -1.24
CHD1L-210ENST00000622533 KRTAP1-4P0C5Y4 121 aa7.28□□□□□ -1.24
CHD1L-210ENST00000622533 H0YAA0 97 aa7.26□□□□□ -1.25
CHD1L-210ENST00000622533 KRTAP10-1P60331 282 aa7.25□□□□□ -1.25
CHD1L-210ENST00000622533 KRTAP25-1Q3LHN0 102 aa7.25□□□□□ -1.25
CHD1L-210ENST00000622533 A8MUU9 505 aa7.25□□□□□ -1.25
CHD1L-210ENST00000622533 LINC00304Q8N9R0 145 aa7.24□□□□□ -1.25
CHD1L-210ENST00000622533 CRIPTQ9P021 101 aa7.24□□□□□ -1.25
CHD1L-210ENST00000622533 TYMSOSQ8TAI1 123 aa7.24□□□□□ -1.25
CHD1L-210ENST00000622533 ROMO1P60602 79 aa7.22□□□□□ -1.25
CHD1L-210ENST00000622533 RPS29P62273 56 aaKnown RBP7.21□□□□□ -1.26
CHD1L-210ENST00000622533 DNAH5Q8TE73 4624 aa7.2□□□□□ -1.26
CHD1L-210ENST00000622533 PKHD1P08F94 4074 aa7.2□□□□□ -1.26
CHD1L-210ENST00000622533 FAT2Q9NYQ8 4349 aa7.15□□□□□ -1.26
CHD1L-210ENST00000622533 LRP1BQ9NZR2 4599 aa7.14□□□□□ -1.27
CHD1L-210ENST00000622533 A0A1B0GU33 70 aa7.13□□□□□ -1.27
CHD1L-210ENST00000622533 P0C880 135 aa7.07□□□□□ -1.28
CHD1L-210ENST00000622533 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
CHD1L-210ENST00000622533 PKD1P98161 4303 aa7.07□□□□□ -1.28
CHD1L-210ENST00000622533 KMT2CQ8NEZ4 4911 aaKnown RBP7.06□□□□□ -1.28
CHD1L-210ENST00000622533 VPS13BQ7Z7G8 4022 aa7.06□□□□□ -1.28
CHD1L-210ENST00000622533 SMR3BP02814 79 aaPredicted RBP7.05□□□□□ -1.28
CHD1L-210ENST00000622533 C20orf166-AS1Q96NR2 134 aa7.04□□□□□ -1.28
CHD1L-210ENST00000622533 FAT1Q14517 4588 aa7.02□□□□□ -1.29
CHD1L-210ENST00000622533 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
CHD1L-210ENST00000622533 K7ERS5 55 aa6.96□□□□□ -1.3
CHD1L-210ENST00000622533 C9orf92A6NGG3 77 aa6.96□□□□□ -1.3
CHD1L-210ENST00000622533 SACSQ9NZJ4 4579 aa6.96□□□□□ -1.3
CHD1L-210ENST00000622533 COX6B2Q6YFQ2 88 aa6.95□□□□□ -1.3
CHD1L-210ENST00000622533 DMBT1Q9UGM3 2413 aaPredicted RBP6.95□□□□□ -1.3
CHD1L-210ENST00000622533 SPINT4Q6UDR6 99 aa6.9□□□□□ -1.3
CHD1L-210ENST00000622533 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
CHD1L-210ENST00000622533 KRTAP21-3Q3LHN1 58 aa6.87□□□□□ -1.31
CHD1L-210ENST00000622533 A0A0D9SG42 100 aa6.86□□□□□ -1.31
CHD1L-210ENST00000622533 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms