RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 MT1HP80294 61 aa11.25□□□□□ -0.61
PMPCA-212ENST00000622209 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
PMPCA-212ENST00000622209 DEFB116Q30KQ4 102 aa11.24□□□□□ -0.61
PMPCA-212ENST00000622209 Q75L30 129 aa11.23□□□□□ -0.61
PMPCA-212ENST00000622209 J3KT08 172 aa11.2□□□□□ -0.62
PMPCA-212ENST00000622209 CRCT1Q9UGL9 99 aa11.2□□□□□ -0.62
PMPCA-212ENST00000622209 DSCR10P59022 87 aa11.19□□□□□ -0.62
PMPCA-212ENST00000622209 LINC00313P59037 77 aa11.19□□□□□ -0.62
PMPCA-212ENST00000622209 K7EP34 96 aa11.18□□□□□ -0.62
PMPCA-212ENST00000622209 C20orf166-AS1Q96NR2 134 aa11.17□□□□□ -0.62
PMPCA-212ENST00000622209 A8MUU9 505 aa11.15□□□□□ -0.62
PMPCA-212ENST00000622209 SMCPP49901 116 aaPredicted RBP11.15□□□□□ -0.62
PMPCA-212ENST00000622209 ATP11AUNQ6ZP68 121 aa11.15□□□□□ -0.62
PMPCA-212ENST00000622209 IGHV6-1A0A0B4J1U7 121 aa11.13□□□□□ -0.63
PMPCA-212ENST00000622209 A0A1B0GVX0 72 aa11.13□□□□□ -0.63
PMPCA-212ENST00000622209 PRO0461Q9UI25 63 aa11.13□□□□□ -0.63
PMPCA-212ENST00000622209 GTF2H5Q6ZYL4 71 aa11.12□□□□□ -0.63
PMPCA-212ENST00000622209 C8orf87E5RJ46 101 aa11.11□□□□□ -0.63
PMPCA-212ENST00000622209 NREPQ16612 68 aa11.11□□□□□ -0.63
PMPCA-212ENST00000622209 NOTCH2NLQ7Z3S9 236 aa11.1□□□□□ -0.63
PMPCA-212ENST00000622209 KRTAP16-1A8MUX0 517 aa11.09□□□□□ -0.63
PMPCA-212ENST00000622209 NDUFB1O75438 58 aa11.09□□□□□ -0.63
PMPCA-212ENST00000622209 KRTAP10-6P60371 365 aaPredicted RBP11.08□□□□□ -0.64
PMPCA-212ENST00000622209 M0R2T5 61 aa11.07□□□□□ -0.64
PMPCA-212ENST00000622209 COX6B2Q6YFQ2 88 aa11.07□□□□□ -0.64
PMPCA-212ENST00000622209 LORP23490 312 aaPredicted RBP11.06□□□□□ -0.64
PMPCA-212ENST00000622209 A8MWP4 228 aa11.05□□□□□ -0.64
PMPCA-212ENST00000622209 F8W1H4 67 aa11.02□□□□□ -0.65
PMPCA-212ENST00000622209 FLGP20930 4061 aaPredicted RBP11□□□□□ -0.65
PMPCA-212ENST00000622209 IGKV3D-7A0A0C4DH55 119 aa10.99□□□□□ -0.65
PMPCA-212ENST00000622209 PRR15Q8IV56 129 aa10.96□□□□□ -0.65
PMPCA-212ENST00000622209 C8orf17Q9NRJ1 99 aa10.96□□□□□ -0.65
PMPCA-212ENST00000622209 Q6ZVQ6 151 aa10.93□□□□□ -0.66
PMPCA-212ENST00000622209 BPY2O14599 106 aa10.92□□□□□ -0.66
PMPCA-212ENST00000622209 ETDBQ3ZM63 59 aa10.9□□□□□ -0.66
PMPCA-212ENST00000622209 Q8N9P0 234 aaPredicted RBP10.89□□□□□ -0.67
PMPCA-212ENST00000622209 UBL5Q9BZL1 73 aa10.87□□□□□ -0.67
PMPCA-212ENST00000622209 LINC00846Q9NV44 126 aa10.87□□□□□ -0.67
PMPCA-212ENST00000622209 K7EQZ3 153 aa10.86□□□□□ -0.67
PMPCA-212ENST00000622209 MMP24-AS1A0A0U1RRL7 71 aa10.84□□□□□ -0.67
PMPCA-212ENST00000622209 ZCCHC13Q8WW36 166 aaKnown RBP10.83□□□□□ -0.68
PMPCA-212ENST00000622209 TMEM254Q8TBM7 123 aa10.82□□□□□ -0.68
PMPCA-212ENST00000622209 MRPL34Q9BQ48 92 aaKnown RBP10.8□□□□□ -0.68
PMPCA-212ENST00000622209 hDV103S1A0JD37 113 aa10.79□□□□□ -0.68
PMPCA-212ENST00000622209 Q8N9L7 120 aa10.75□□□□□ -0.69
PMPCA-212ENST00000622209 A0A1B0GV90 55 aa10.69□□□□□ -0.7
PMPCA-212ENST00000622209 CASC2Q6XLA1 102 aa10.69□□□□□ -0.7
PMPCA-212ENST00000622209 NDUFS5O43920 106 aa10.68□□□□□ -0.7
PMPCA-212ENST00000622209 ACYP1P07311 99 aa10.68□□□□□ -0.7
PMPCA-212ENST00000622209 HRES1P13985 223 aa10.67□□□□□ -0.7
PMPCA-212ENST00000622209 SPINK7P58062 85 aa10.67□□□□□ -0.7
PMPCA-212ENST00000622209 CXCL6P80162 114 aa10.67□□□□□ -0.7
PMPCA-212ENST00000622209 WFDC13Q8IUB5 93 aa10.67□□□□□ -0.7
PMPCA-212ENST00000622209 MPLKIPQ8TAP9 179 aa10.65□□□□□ -0.7
PMPCA-212ENST00000622209 RBM12B-AS1Q9P1G2 102 aa10.65□□□□□ -0.7
PMPCA-212ENST00000622209 USH2AO75445 5202 aa10.63□□□□□ -0.71
PMPCA-212ENST00000622209 FAM240AA0A1B0GVK7 77 aa10.63□□□□□ -0.71
PMPCA-212ENST00000622209 HCG22E2RYF7 251 aa10.62□□□□□ -0.71
PMPCA-212ENST00000622209 KRTAP9-8Q9BYQ0 159 aa10.6□□□□□ -0.71
PMPCA-212ENST00000622209 FAM236DA0A1B0GTK5 79 aa10.59□□□□□ -0.71
PMPCA-212ENST00000622209 FAM236CP0DP71 79 aa10.59□□□□□ -0.71
PMPCA-212ENST00000622209 SSPOA2VEC9 5147 aa10.57□□□□□ -0.72
PMPCA-212ENST00000622209 Q5W150 140 aa10.54□□□□□ -0.72
PMPCA-212ENST00000622209 ATP5EP2Q5VTU8 51 aa10.5□□□□□ -0.73
PMPCA-212ENST00000622209 C7orf65Q6ZTY9 151 aa10.45□□□□□ -0.74
PMPCA-212ENST00000622209 TP53AIP1Q9HCN2 124 aa10.45□□□□□ -0.74
PMPCA-212ENST00000622209 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
PMPCA-212ENST00000622209 MT2AP02795 61 aa10.44□□□□□ -0.74
PMPCA-212ENST00000622209 IGKV2-30P06310 120 aa10.44□□□□□ -0.74
PMPCA-212ENST00000622209 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.42□□□□□ -0.74
PMPCA-212ENST00000622209 LINC00643Q86TS7 51 aa10.42□□□□□ -0.74
PMPCA-212ENST00000622209 J3QR89 54 aa10.39□□□□□ -0.75
PMPCA-212ENST00000622209 KRTAP9-7A8MTY7 169 aa10.38□□□□□ -0.75
PMPCA-212ENST00000622209 FCGBPQ9Y6R7 5405 aaPredicted RBP10.37□□□□□ -0.75
PMPCA-212ENST00000622209 HIST1H4AP62805 103 aaKnown RBP10.37□□□□□ -0.75
PMPCA-212ENST00000622209 MT1FP04733 61 aa10.36□□□□□ -0.75
PMPCA-212ENST00000622209 KRTAP10-10P60014 251 aa10.33□□□□□ -0.76
PMPCA-212ENST00000622209 LCE2BO14633 110 aa10.31□□□□□ -0.76
PMPCA-212ENST00000622209 KRTAP9-3Q9BYQ3 159 aa10.28□□□□□ -0.76
PMPCA-212ENST00000622209 H1FX-AS1Q4G0G2 97 aa10.27□□□□□ -0.77
PMPCA-212ENST00000622209 KRTAP19-1Q8IUB9 90 aa10.25□□□□□ -0.77
PMPCA-212ENST00000622209 A0A087WVE0 104 aa10.24□□□□□ -0.77
PMPCA-212ENST00000622209 C4orf26Q17RF5 130 aa10.23□□□□□ -0.77
PMPCA-212ENST00000622209 TRAV22A0A0B4J277 110 aa10.21□□□□□ -0.77
PMPCA-212ENST00000622209 UQCRQO14949 82 aa10.21□□□□□ -0.77
PMPCA-212ENST00000622209 CYP4F30PQ9H0H9 118 aa10.16□□□□□ -0.78
PMPCA-212ENST00000622209 LOC101927531A0A1B0GV80 90 aa10.15□□□□□ -0.78
PMPCA-212ENST00000622209 MACF1Q9UPN3 7388 aaKnown RBP10.14□□□□□ -0.79
PMPCA-212ENST00000622209 SYNE2Q8WXH0 6885 aaKnown RBP10.12□□□□□ -0.79
PMPCA-212ENST00000622209 K7ERU9 68 aa10.12□□□□□ -0.79
PMPCA-212ENST00000622209 ATOX1O00244 68 aa10.12□□□□□ -0.79
PMPCA-212ENST00000622209 C1orf64Q8NEQ6 169 aa10.11□□□□□ -0.79
PMPCA-212ENST00000622209 H0Y9P7 68 aa10.1□□□□□ -0.79
PMPCA-212ENST00000622209 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
PMPCA-212ENST00000622209 OCR1Q9BZK8 76 aa10.06□□□□□ -0.8
PMPCA-212ENST00000622209 IMUPQ9GZP8 106 aa10.02□□□□□ -0.81
PMPCA-212ENST00000622209 MP68P56378 58 aa9.99□□□□□ -0.81
PMPCA-212ENST00000622209 SCGB1A1P11684 91 aa9.98□□□□□ -0.81
PMPCA-212ENST00000622209 C5orf47Q569G3 176 aa9.98□□□□□ -0.81
PMPCA-212ENST00000622209 LINC00208Q96KT6 92 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms