RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 LAMA5O15230 3695 aa6.45□□□□□ -1.38
SLC6A6-210ENST00000622186 LOC400499M0QZD8 3231 aa6.44□□□□□ -1.38
SLC6A6-210ENST00000622186 TPRXLQ17RH7 258 aa6.42□□□□□ -1.38
SLC6A6-210ENST00000622186 KRTAP13-1Q8IUC0 172 aa6.41□□□□□ -1.38
SLC6A6-210ENST00000622186 CSMD1Q96PZ7 3565 aa6.39□□□□□ -1.39
SLC6A6-210ENST00000622186 PRRC2CQ9Y520 2896 aaKnown RBP6.39□□□□□ -1.39
SLC6A6-210ENST00000622186 KRTAP7-1Q8IUC3 87 aa6.38□□□□□ -1.39
SLC6A6-210ENST00000622186 BOD1L1Q8NFC6 3051 aa6.38□□□□□ -1.39
SLC6A6-210ENST00000622186 TEP1Q99973 2627 aaKnown RBP6.38□□□□□ -1.39
SLC6A6-210ENST00000622186 TEX15Q9BXT5 2789 aa6.34□□□□□ -1.4
SLC6A6-210ENST00000622186 CFAP47Q6ZTR5 3102 aa6.33□□□□□ -1.4
SLC6A6-210ENST00000622186 DSPP15924 2871 aaKnown RBP6.31□□□□□ -1.4
SLC6A6-210ENST00000622186 BSNQ9UPA5 3926 aa6.3□□□□□ -1.4
SLC6A6-210ENST00000622186 ZFHX3Q15911 3703 aa6.3□□□□□ -1.4
SLC6A6-210ENST00000622186 UNC79Q9P2D8 2635 aa6.28□□□□□ -1.4
SLC6A6-210ENST00000622186 BAHCC1Q9P281 2608 aa6.28□□□□□ -1.4
SLC6A6-210ENST00000622186 MGAQ8IWI9 3026 aa6.26□□□□□ -1.41
SLC6A6-210ENST00000622186 NBEAQ8NFP9 2946 aa6.26□□□□□ -1.41
SLC6A6-210ENST00000622186 DMXL2Q8TDJ6 3036 aa6.25□□□□□ -1.41
SLC6A6-210ENST00000622186 DMXL1Q9Y485 3027 aa6.25□□□□□ -1.41
SLC6A6-210ENST00000622186 NOTCH1P46531 2555 aa6.22□□□□□ -1.41
SLC6A6-210ENST00000622186 SVEP1Q4LDE5 3571 aa6.22□□□□□ -1.41
SLC6A6-210ENST00000622186 COL6A5A8TX70 2615 aa6.21□□□□□ -1.41
SLC6A6-210ENST00000622186 KRTAP1-4P0C5Y4 121 aa6.21□□□□□ -1.42
SLC6A6-210ENST00000622186 CENPEQ02224 2701 aa6.21□□□□□ -1.42
SLC6A6-210ENST00000622186 AKAP13Q12802 2813 aa6.21□□□□□ -1.42
SLC6A6-210ENST00000622186 RELNP78509 3460 aa6.2□□□□□ -1.42
SLC6A6-210ENST00000622186 LRBAP50851 2863 aa6.19□□□□□ -1.42
SLC6A6-210ENST00000622186 KRTAP13-3Q3SY46 172 aa6.18□□□□□ -1.42
SLC6A6-210ENST00000622186 ATMQ13315 3056 aa6.17□□□□□ -1.42
SLC6A6-210ENST00000622186 ZZEF1O43149 2961 aa6.17□□□□□ -1.42
SLC6A6-210ENST00000622186 CHD6Q8TD26 2715 aa6.16□□□□□ -1.42
SLC6A6-210ENST00000622186 KRTAP12-2P59991 146 aa6.15□□□□□ -1.43
SLC6A6-210ENST00000622186 H0YAA0 97 aa6.14□□□□□ -1.43
SLC6A6-210ENST00000622186 KALRNO60229 2985 aa6.13□□□□□ -1.43
SLC6A6-210ENST00000622186 ADGRG4Q8IZF6 3080 aa6.13□□□□□ -1.43
SLC6A6-210ENST00000622186 VPS13CQ709C8 3753 aa6.11□□□□□ -1.43
SLC6A6-210ENST00000622186 IGSF10Q6WRI0 2623 aa6.11□□□□□ -1.43
SLC6A6-210ENST00000622186 KMT2BQ9UMN6 2715 aaPredicted RBP6.1□□□□□ -1.43
SLC6A6-210ENST00000622186 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
SLC6A6-210ENST00000622186 CRYBG3Q68DQ2 2970 aa6.07□□□□□ -1.44
SLC6A6-210ENST00000622186 TACC2O95359 2948 aa6.05□□□□□ -1.44
SLC6A6-210ENST00000622186 GCN1Q92616 2671 aaKnown RBP5.96□□□□□ -1.45
SLC6A6-210ENST00000622186 COL12A1Q99715 3063 aa5.94□□□□□ -1.46
SLC6A6-210ENST00000622186 MAP1AP78559 2803 aaPredicted RBP5.94□□□□□ -1.46
SLC6A6-210ENST00000622186 KRTAP13-4Q3LI77 160 aa5.94□□□□□ -1.46
SLC6A6-210ENST00000622186 LORP23490 312 aaPredicted RBP5.93□□□□□ -1.46
SLC6A6-210ENST00000622186 DCHS2Q6V1P9 2916 aa5.92□□□□□ -1.46
SLC6A6-210ENST00000622186 NSD1Q96L73 2696 aaPredicted RBP5.92□□□□□ -1.46
SLC6A6-210ENST00000622186 CELSR1Q9NYQ6 3014 aa5.88□□□□□ -1.47
SLC6A6-210ENST00000622186 CSMD2Q7Z408 3487 aa5.88□□□□□ -1.47
SLC6A6-210ENST00000622186 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
SLC6A6-210ENST00000622186 ZNF292O60281 2723 aa5.87□□□□□ -1.47
SLC6A6-210ENST00000622186 ITPR2Q14571 2701 aa5.85□□□□□ -1.47
SLC6A6-210ENST00000622186 HRNRQ86YZ3 2850 aaPredicted RBP5.83□□□□□ -1.48
SLC6A6-210ENST00000622186 NBEAL2Q6ZNJ1 2754 aa5.83□□□□□ -1.48
SLC6A6-210ENST00000622186 ASH1LQ9NR48 2969 aaKnown RBP5.83□□□□□ -1.48
SLC6A6-210ENST00000622186 CUBNO60494 3623 aa5.8□□□□□ -1.48
SLC6A6-210ENST00000622186 NBPF19A0A087WUL8 3843 aa5.77□□□□□ -1.49
SLC6A6-210ENST00000622186 UBR5O95071 2799 aaPredicted RBP5.75□□□□□ -1.49
SLC6A6-210ENST00000622186 TENM4Q6N022 2769 aa5.73□□□□□ -1.49
SLC6A6-210ENST00000622186 AKAP9Q99996 3911 aa5.73□□□□□ -1.49
SLC6A6-210ENST00000622186 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
SLC6A6-210ENST00000622186 UTP20O75691 2785 aaKnown RBP5.7□□□□□ -1.5
SLC6A6-210ENST00000622186 ZNF469Q96JG9 3925 aaPredicted RBP5.65□□□□□ -1.5
SLC6A6-210ENST00000622186 KRTAP10-12P60413 245 aa5.64□□□□□ -1.51
SLC6A6-210ENST00000622186 FLNCQ14315 2725 aa5.57□□□□□ -1.52
SLC6A6-210ENST00000622186 APCP25054 2843 aa5.57□□□□□ -1.52
SLC6A6-210ENST00000622186 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
SLC6A6-210ENST00000622186 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
SLC6A6-210ENST00000622186 CELSR2Q9HCU4 2923 aa5.54□□□□□ -1.52
SLC6A6-210ENST00000622186 HIVEP1P15822 2718 aa5.52□□□□□ -1.53
SLC6A6-210ENST00000622186 INE1O15225 51 aa5.51□□□□□ -1.53
SLC6A6-210ENST00000622186 TENM2Q9NT68 2774 aa5.5□□□□□ -1.53
SLC6A6-210ENST00000622186 ANK3Q12955 4377 aaKnown RBP5.49□□□□□ -1.53
SLC6A6-210ENST00000622186 FBN2P35556 2912 aa5.49□□□□□ -1.53
SLC6A6-210ENST00000622186 ITPR1Q14643 2758 aa5.48□□□□□ -1.53
SLC6A6-210ENST00000622186 TENM3Q9P273 2699 aa5.47□□□□□ -1.53
SLC6A6-210ENST00000622186 ZANQ9Y493 2812 aa5.46□□□□□ -1.54
SLC6A6-210ENST00000622186 TENM1Q9UKZ4 2725 aa5.44□□□□□ -1.54
SLC6A6-210ENST00000622186 KRTAP12-3P60328 96 aa5.4□□□□□ -1.55
SLC6A6-210ENST00000622186 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
SLC6A6-210ENST00000622186 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
SLC6A6-210ENST00000622186 MXRA5Q9NR99 2828 aa5.36□□□□□ -1.55
SLC6A6-210ENST00000622186 TRRAPQ9Y4A5 3859 aa5.32□□□□□ -1.56
SLC6A6-210ENST00000622186 TGP01266 2768 aa5.29□□□□□ -1.56
SLC6A6-210ENST00000622186 NF1P21359 2839 aa5.27□□□□□ -1.57
SLC6A6-210ENST00000622186 KRTAP10-7P60409 375 aaPredicted RBP5.26□□□□□ -1.57
SLC6A6-210ENST00000622186 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
SLC6A6-210ENST00000622186 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
SLC6A6-210ENST00000622186 CMYA5Q8N3K9 4069 aa5.23□□□□□ -1.57
SLC6A6-210ENST00000622186 ANK2Q01484 3957 aa5.23□□□□□ -1.57
SLC6A6-210ENST00000622186 MT1HL1P0DM35 61 aa5.23□□□□□ -1.57
SLC6A6-210ENST00000622186 PDZD2O15018 2839 aa5.2□□□□□ -1.58
SLC6A6-210ENST00000622186 NIPBLQ6KC79 2804 aaeCLIP5.14□□□□□ -1.596e-6■□□□□ 9
SLC6A6-210ENST00000622186 CSMD3Q7Z407 3707 aa5.14□□□□□ -1.59
SLC6A6-210ENST00000622186 LYSTQ99698 3801 aa5.12□□□□□ -1.59
SLC6A6-210ENST00000622186 FBN3Q75N90 2809 aa5.12□□□□□ -1.59
SLC6A6-210ENST00000622186 SPRR2EP22531 72 aa5.11□□□□□ -1.59
SLC6A6-210ENST00000622186 SPRR2BP35325 72 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms