RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 CNBPP62633 177 aaKnown RBP5.66□□□□□ -1.5
GGA3-222ENST00000621217 SPACA4Q8TDM5 124 aa5.65□□□□□ -1.5
GGA3-222ENST00000621217 IGLV5-37A0A075B6J1 123 aa5.65□□□□□ -1.51
GGA3-222ENST00000621217 A0A1B0GVX0 72 aa5.65□□□□□ -1.51
GGA3-222ENST00000621217 KRTAP7-1Q8IUC3 87 aa5.63□□□□□ -1.51
GGA3-222ENST00000621217 CSMD3Q7Z407 3707 aa5.63□□□□□ -1.51
GGA3-222ENST00000621217 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
GGA3-222ENST00000621217 SPRR1AP35321 89 aa5.62□□□□□ -1.51
GGA3-222ENST00000621217 KRTAP11-1Q8IUC1 163 aa5.61□□□□□ -1.51
GGA3-222ENST00000621217 SPINK7P58062 85 aa5.6□□□□□ -1.51
GGA3-222ENST00000621217 KRTAP10-2P60368 255 aa5.59□□□□□ -1.51
GGA3-222ENST00000621217 KRTAP4-16G5E9R7 235 aaPredicted RBP5.59□□□□□ -1.52
GGA3-222ENST00000621217 ZNF861PO60384 105 aa5.59□□□□□ -1.52
GGA3-222ENST00000621217 PLA2G1BP04054 148 aaKnown RBP5.59□□□□□ -1.52
GGA3-222ENST00000621217 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
GGA3-222ENST00000621217 FBN3Q75N90 2809 aa5.57□□□□□ -1.52
GGA3-222ENST00000621217 CSAG1Q6PB30 78 aa5.56□□□□□ -1.52
GGA3-222ENST00000621217 TYMSOSQ8TAI1 123 aa5.55□□□□□ -1.52
GGA3-222ENST00000621217 IGLV7-43P04211 117 aa5.55□□□□□ -1.52
GGA3-222ENST00000621217 HRES1P13985 223 aa5.54□□□□□ -1.52
GGA3-222ENST00000621217 ZCCHC13Q8WW36 166 aaKnown RBP5.53□□□□□ -1.52
GGA3-222ENST00000621217 ASB16-AS1Q495Z4 193 aa5.52□□□□□ -1.53
GGA3-222ENST00000621217 A8MU10 97 aa5.52□□□□□ -1.53
GGA3-222ENST00000621217 A6NN06 94 aa5.51□□□□□ -1.53
GGA3-222ENST00000621217 KRTAP10-1P60331 282 aa5.51□□□□□ -1.53
GGA3-222ENST00000621217 MMP24-AS1A0A0U1RRL7 71 aa5.5□□□□□ -1.53
GGA3-222ENST00000621217 Q96NJ1 140 aa5.5□□□□□ -1.53
GGA3-222ENST00000621217 Q6ZRN7 208 aaPredicted RBP5.49□□□□□ -1.53
GGA3-222ENST00000621217 Q6ZR54 194 aa5.49□□□□□ -1.53
GGA3-222ENST00000621217 MEGF8Q7Z7M0 2845 aa5.46□□□□□ -1.54
GGA3-222ENST00000621217 PLAC8Q9NZF1 115 aa5.45□□□□□ -1.54
GGA3-222ENST00000621217 SPRR1BP22528 89 aa5.45□□□□□ -1.54
GGA3-222ENST00000621217 LINC00472Q9H8W2 130 aa5.45□□□□□ -1.54
GGA3-222ENST00000621217 C9orf92A6NGG3 77 aa5.45□□□□□ -1.54
GGA3-222ENST00000621217 LCE6AA0A183 80 aa5.43□□□□□ -1.54
GGA3-222ENST00000621217 A0A1B0GU33 70 aa5.43□□□□□ -1.54
GGA3-222ENST00000621217 DMAC1Q96GE9 116 aa5.43□□□□□ -1.54
GGA3-222ENST00000621217 Q8N1X5 172 aa5.42□□□□□ -1.54
GGA3-222ENST00000621217 A0A087X002 238 aa5.4□□□□□ -1.54
GGA3-222ENST00000621217 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.54
GGA3-222ENST00000621217 NOTCH2NLQ7Z3S9 236 aa5.4□□□□□ -1.54
GGA3-222ENST00000621217 LINC00304Q8N9R0 145 aa5.4□□□□□ -1.55
GGA3-222ENST00000621217 KRTAP21-3Q3LHN1 58 aa5.38□□□□□ -1.55
GGA3-222ENST00000621217 A0A0D9SG42 100 aa5.37□□□□□ -1.55
GGA3-222ENST00000621217 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
GGA3-222ENST00000621217 SPATA8Q6RVD6 105 aa5.37□□□□□ -1.55
GGA3-222ENST00000621217 ADM2Q7Z4H4 148 aa5.34□□□□□ -1.55
GGA3-222ENST00000621217 Q5W150 140 aa5.33□□□□□ -1.56
GGA3-222ENST00000621217 DNHD1Q96M86 4753 aa5.32□□□□□ -1.56
GGA3-222ENST00000621217 HUWE1Q7Z6Z7 4374 aaKnown RBP5.32□□□□□ -1.56
GGA3-222ENST00000621217 KRTAP13-1Q8IUC0 172 aa5.31□□□□□ -1.56
GGA3-222ENST00000621217 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
GGA3-222ENST00000621217 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
GGA3-222ENST00000621217 LINC00483Q53H64 154 aa5.28□□□□□ -1.56
GGA3-222ENST00000621217 ANK2Q01484 3957 aa5.27□□□□□ -1.57
GGA3-222ENST00000621217 KRTAP25-1Q3LHN0 102 aa5.26□□□□□ -1.57
GGA3-222ENST00000621217 J3QL48 77 aa5.26□□□□□ -1.57
GGA3-222ENST00000621217 ROMO1P60602 79 aa5.26□□□□□ -1.57
GGA3-222ENST00000621217 Q5VSD8 79 aa5.25□□□□□ -1.57
GGA3-222ENST00000621217 DNAH10Q8IVF4 4471 aa5.24□□□□□ -1.57
GGA3-222ENST00000621217 KRTAP13-2Q52LG2 175 aa5.23□□□□□ -1.57
GGA3-222ENST00000621217 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
GGA3-222ENST00000621217 DNAH9Q9NYC9 4486 aa5.2□□□□□ -1.58
GGA3-222ENST00000621217 H1FX-AS1Q4G0G2 97 aa5.19□□□□□ -1.58
GGA3-222ENST00000621217 PRKDCP78527 4128 aaKnown RBP5.17□□□□□ -1.58
GGA3-222ENST00000621217 PLECQ15149 4684 aaKnown RBP5.17□□□□□ -1.58
GGA3-222ENST00000621217 NDUFAF8A1L188 74 aa5.15□□□□□ -1.58
GGA3-222ENST00000621217 LYSTQ99698 3801 aa5.15□□□□□ -1.59
GGA3-222ENST00000621217 Q6ZSA8 131 aa5.13□□□□□ -1.59
GGA3-222ENST00000621217 KRTAP1-4P0C5Y4 121 aa5.09□□□□□ -1.59
GGA3-222ENST00000621217 STARD9Q9P2P6 4700 aa5.08□□□□□ -1.6
GGA3-222ENST00000621217 A8MUU9 505 aa5.08□□□□□ -1.6
GGA3-222ENST00000621217 DNAH11Q96DT5 4516 aa5.03□□□□□ -1.6
GGA3-222ENST00000621217 KMT2AQ03164 3969 aa5.03□□□□□ -1.6
GGA3-222ENST00000621217 CAMK2N1Q7Z7J9 78 aa5.02□□□□□ -1.61
GGA3-222ENST00000621217 COX6B2Q6YFQ2 88 aa5.02□□□□□ -1.61
GGA3-222ENST00000621217 S4R3F8 94 aa5.01□□□□□ -1.61
GGA3-222ENST00000621217 C20orf166-AS1Q96NR2 134 aa5.01□□□□□ -1.61
GGA3-222ENST00000621217 DNAH1Q9P2D7 4330 aa5□□□□□ -1.61
GGA3-222ENST00000621217 CMYA5Q8N3K9 4069 aa5□□□□□ -1.61
GGA3-222ENST00000621217 DNAH7Q8WXX0 4024 aa4.98□□□□□ -1.61
GGA3-222ENST00000621217 A0A1B0GVY2 172 aa4.96□□□□□ -1.62
GGA3-222ENST00000621217 R4GN34 69 aa4.94□□□□□ -1.62
GGA3-222ENST00000621217 KRTAP13-3Q3SY46 172 aa4.93□□□□□ -1.62
GGA3-222ENST00000621217 FAT1Q14517 4588 aa4.92□□□□□ -1.62
GGA3-222ENST00000621217 DNAH5Q8TE73 4624 aa4.91□□□□□ -1.62
GGA3-222ENST00000621217 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.63
GGA3-222ENST00000621217 VPS13DQ5THJ4 4388 aa4.89□□□□□ -1.63
GGA3-222ENST00000621217 DNAH3Q8TD57 4116 aa4.88□□□□□ -1.63
GGA3-222ENST00000621217 M0QZ58 72 aa4.87□□□□□ -1.63
GGA3-222ENST00000621217 H0YAA0 97 aa4.86□□□□□ -1.63
GGA3-222ENST00000621217 FRAS1Q86XX4 4008 aa4.86□□□□□ -1.63
GGA3-222ENST00000621217 DNAH8Q96JB1 4490 aa4.86□□□□□ -1.63
GGA3-222ENST00000621217 LRP1BQ9NZR2 4599 aa4.83□□□□□ -1.64
GGA3-222ENST00000621217 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
GGA3-222ENST00000621217 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
GGA3-222ENST00000621217 PLAC4Q8WY50 150 aa4.82□□□□□ -1.64
GGA3-222ENST00000621217 DNAH17Q9UFH2 4485 aa4.81□□□□□ -1.64
GGA3-222ENST00000621217 HYDINQ4G0P3 5121 aa4.81□□□□□ -1.64
GGA3-222ENST00000621217 DNAH6Q9C0G6 4158 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 241.2 ms