RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
TNFAIP3-211ENST00000621150 BPY2O14599 106 aa7.27□□□□□ -1.25
TNFAIP3-211ENST00000621150 SPINK6Q6UWN8 80 aa7.27□□□□□ -1.25
TNFAIP3-211ENST00000621150 SSBP3-AS1Q7Z2R9 100 aa7.27□□□□□ -1.25
TNFAIP3-211ENST00000621150 TNXBP22105 4242 aa7.26□□□□□ -1.25
TNFAIP3-211ENST00000621150 IGKV4-1P06312 121 aa7.26□□□□□ -1.25
TNFAIP3-211ENST00000621150 MT1HL1P0DM35 61 aa7.26□□□□□ -1.25
TNFAIP3-211ENST00000621150 DSCR10P59022 87 aa7.26□□□□□ -1.25
TNFAIP3-211ENST00000621150 LINC00472Q9H8W2 130 aa7.26□□□□□ -1.25
TNFAIP3-211ENST00000621150 CD164Q04900 197 aa7.23□□□□□ -1.25
TNFAIP3-211ENST00000621150 Q8N9L7 120 aa7.23□□□□□ -1.25
TNFAIP3-211ENST00000621150 Q96NJ1 140 aa7.23□□□□□ -1.25
TNFAIP3-211ENST00000621150 HRCT1Q6UXD1 115 aa7.19□□□□□ -1.26
TNFAIP3-211ENST00000621150 OCR1Q9BZK8 76 aa7.19□□□□□ -1.26
TNFAIP3-211ENST00000621150 K7EQZ3 153 aa7.19□□□□□ -1.26
TNFAIP3-211ENST00000621150 ANAPC13Q9BS18 74 aa7.19□□□□□ -1.26
TNFAIP3-211ENST00000621150 ATOX1O00244 68 aa7.18□□□□□ -1.26
TNFAIP3-211ENST00000621150 DEFB116Q30KQ4 102 aa7.18□□□□□ -1.26
TNFAIP3-211ENST00000621150 SS18L2Q9UHA2 77 aa7.18□□□□□ -1.26
TNFAIP3-211ENST00000621150 ASB16-AS1Q495Z4 193 aa7.16□□□□□ -1.26
TNFAIP3-211ENST00000621150 Q5XG85 94 aa7.16□□□□□ -1.26
TNFAIP3-211ENST00000621150 J3KT08 172 aa7.16□□□□□ -1.26
TNFAIP3-211ENST00000621150 A8MWP4 228 aa7.15□□□□□ -1.27
TNFAIP3-211ENST00000621150 PRR15Q8IV56 129 aa7.14□□□□□ -1.27
TNFAIP3-211ENST00000621150 LRP2P98164 4655 aa7.14□□□□□ -1.27
TNFAIP3-211ENST00000621150 RNF213Q63HN8 5207 aa7.13□□□□□ -1.27
TNFAIP3-211ENST00000621150 KRTAP10-8P60410 259 aa7.12□□□□□ -1.27
TNFAIP3-211ENST00000621150 TYMSOSQ8TAI1 123 aa7.12□□□□□ -1.27
TNFAIP3-211ENST00000621150 SERP2Q8N6R1 65 aa7.1□□□□□ -1.27
TNFAIP3-211ENST00000621150 COX7CP15954 63 aa7.09□□□□□ -1.27
TNFAIP3-211ENST00000621150 HCG22E2RYF7 251 aa7.09□□□□□ -1.28
TNFAIP3-211ENST00000621150 CCDC179H3BU77 68 aa7.09□□□□□ -1.28
TNFAIP3-211ENST00000621150 TRAV7A0A075B6U4 112 aa7.07□□□□□ -1.28
TNFAIP3-211ENST00000621150 MMP24-AS1A0A0U1RRL7 71 aa7.07□□□□□ -1.28
TNFAIP3-211ENST00000621150 RPS29P62273 56 aaKnown RBP7.07□□□□□ -1.28
TNFAIP3-211ENST00000621150 SMIM20Q8N5G0 67 aa7.07□□□□□ -1.28
TNFAIP3-211ENST00000621150 UQCRQO14949 82 aa7.06□□□□□ -1.28
TNFAIP3-211ENST00000621150 SPINK1P00995 79 aa7.06□□□□□ -1.28
TNFAIP3-211ENST00000621150 KRTAP15-1Q3LI76 137 aa7.06□□□□□ -1.28
TNFAIP3-211ENST00000621150 C1orf195Q5TG92 126 aa7.06□□□□□ -1.28
TNFAIP3-211ENST00000621150 A0A1B0GVX0 72 aa7.05□□□□□ -1.28
TNFAIP3-211ENST00000621150 LINC00304Q8N9R0 145 aa7.05□□□□□ -1.28
TNFAIP3-211ENST00000621150 LIMD2Q9BT23 127 aa7.05□□□□□ -1.28
TNFAIP3-211ENST00000621150 NDUFB1O75438 58 aa7.04□□□□□ -1.28
TNFAIP3-211ENST00000621150 SPAG11AQ6PDA7 123 aa7.04□□□□□ -1.28
TNFAIP3-211ENST00000621150 C8orf17Q9NRJ1 99 aa7.02□□□□□ -1.29
TNFAIP3-211ENST00000621150 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
TNFAIP3-211ENST00000621150 CASC2Q6XLA1 102 aa7.01□□□□□ -1.29
TNFAIP3-211ENST00000621150 NOTCH2NLQ7Z3S9 236 aa7.01□□□□□ -1.29
TNFAIP3-211ENST00000621150 LPAP08519 4548 aa6.99□□□□□ -1.29
TNFAIP3-211ENST00000621150 IGHV6-1A0A0B4J1U7 121 aa6.98□□□□□ -1.29
TNFAIP3-211ENST00000621150 hDV103S1A0JD37 113 aa6.98□□□□□ -1.29
TNFAIP3-211ENST00000621150 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
TNFAIP3-211ENST00000621150 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
TNFAIP3-211ENST00000621150 KLKP1Q107X0 134 aa6.94□□□□□ -1.3
TNFAIP3-211ENST00000621150 TMEM254Q8TBM7 123 aa6.94□□□□□ -1.3
TNFAIP3-211ENST00000621150 PRR4Q16378 134 aa6.94□□□□□ -1.3
TNFAIP3-211ENST00000621150 C20orf197Q8N268 126 aa6.94□□□□□ -1.3
TNFAIP3-211ENST00000621150 MRPL34Q9BQ48 92 aaKnown RBP6.93□□□□□ -1.3
TNFAIP3-211ENST00000621150 A0A0U1RQV1 116 aa6.92□□□□□ -1.3
TNFAIP3-211ENST00000621150 KRTAP16-1A8MUX0 517 aa6.92□□□□□ -1.3
TNFAIP3-211ENST00000621150 ZCCHC13Q8WW36 166 aaKnown RBP6.9□□□□□ -1.31
TNFAIP3-211ENST00000621150 LINC00313P59037 77 aa6.89□□□□□ -1.31
TNFAIP3-211ENST00000621150 IGLV7-46A0A075B6I9 117 aa6.88□□□□□ -1.31
TNFAIP3-211ENST00000621150 Q8N9P0 234 aaPredicted RBP6.88□□□□□ -1.31
TNFAIP3-211ENST00000621150 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
TNFAIP3-211ENST00000621150 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
TNFAIP3-211ENST00000621150 H7BZZ5 65 aa6.87□□□□□ -1.31
TNFAIP3-211ENST00000621150 MUC2Q02817 5179 aa6.86□□□□□ -1.31
TNFAIP3-211ENST00000621150 KRTAP13-3Q3SY46 172 aa6.85□□□□□ -1.31
TNFAIP3-211ENST00000621150 C4orf26Q17RF5 130 aa6.84□□□□□ -1.31
TNFAIP3-211ENST00000621150 TRAV22A0A0B4J277 110 aa6.83□□□□□ -1.32
TNFAIP3-211ENST00000621150 H3BPC8 53 aa6.83□□□□□ -1.32
TNFAIP3-211ENST00000621150 H0Y9P7 68 aa6.82□□□□□ -1.32
TNFAIP3-211ENST00000621150 NDUFC1O43677 76 aa6.82□□□□□ -1.32
TNFAIP3-211ENST00000621150 MP68P56378 58 aa6.81□□□□□ -1.32
TNFAIP3-211ENST00000621150 RETNLBQ9BQ08 111 aa6.81□□□□□ -1.32
TNFAIP3-211ENST00000621150 TMEM258P61165 79 aa6.8□□□□□ -1.32
TNFAIP3-211ENST00000621150 Q5W150 140 aa6.8□□□□□ -1.32
TNFAIP3-211ENST00000621150 NDUFS5O43920 106 aa6.79□□□□□ -1.32
TNFAIP3-211ENST00000621150 IGKV2-30P06310 120 aa6.79□□□□□ -1.32
TNFAIP3-211ENST00000621150 LINC00208Q96KT6 92 aa6.78□□□□□ -1.32
TNFAIP3-211ENST00000621150 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
TNFAIP3-211ENST00000621150 C1orf64Q8NEQ6 169 aa6.76□□□□□ -1.33
TNFAIP3-211ENST00000621150 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
TNFAIP3-211ENST00000621150 A8MUU9 505 aa6.74□□□□□ -1.33
TNFAIP3-211ENST00000621150 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
TNFAIP3-211ENST00000621150 C9orf92A6NGG3 77 aa6.72□□□□□ -1.33
TNFAIP3-211ENST00000621150 FAM236DA0A1B0GTK5 79 aa6.71□□□□□ -1.34
TNFAIP3-211ENST00000621150 FAM236CP0DP71 79 aa6.71□□□□□ -1.34
TNFAIP3-211ENST00000621150 LOC101927531A0A1B0GV80 90 aa6.69□□□□□ -1.34
TNFAIP3-211ENST00000621150 ATP5EP56381 51 aaPredicted RBP6.68□□□□□ -1.34
TNFAIP3-211ENST00000621150 PSPHP1O15172 72 aa6.67□□□□□ -1.34
TNFAIP3-211ENST00000621150 CYP4F30PQ9H0H9 118 aa6.67□□□□□ -1.34
TNFAIP3-211ENST00000621150 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
TNFAIP3-211ENST00000621150 XP32Q5T750 250 aa6.65□□□□□ -1.35
TNFAIP3-211ENST00000621150 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
TNFAIP3-211ENST00000621150 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
TNFAIP3-211ENST00000621150 PCOTHQ58A44 107 aa6.62□□□□□ -1.35
TNFAIP3-211ENST00000621150 MUC17Q685J3 4493 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms