RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 K7EQZ3 153 aa5.98□□□□□ -1.45
VTA1-205ENST00000620996 LINC00483Q53H64 154 aa5.96□□□□□ -1.45
VTA1-205ENST00000620996 FAT2Q9NYQ8 4349 aa5.96□□□□□ -1.45
VTA1-205ENST00000620996 Q6ZSA8 131 aa5.96□□□□□ -1.46
VTA1-205ENST00000620996 DSCR10P59022 87 aa5.96□□□□□ -1.46
VTA1-205ENST00000620996 C7orf65Q6ZTY9 151 aa5.96□□□□□ -1.46
VTA1-205ENST00000620996 SACSQ9NZJ4 4579 aa5.96□□□□□ -1.46
VTA1-205ENST00000620996 PKD1P98161 4303 aa5.95□□□□□ -1.46
VTA1-205ENST00000620996 A6NN06 94 aa5.95□□□□□ -1.46
VTA1-205ENST00000620996 ATP11AUNQ6ZP68 121 aa5.95□□□□□ -1.46
VTA1-205ENST00000620996 SMR3BP02814 79 aaPredicted RBP5.94□□□□□ -1.46
VTA1-205ENST00000620996 WFDC13Q8IUB5 93 aa5.94□□□□□ -1.46
VTA1-205ENST00000620996 PRR26Q8N8Z3 221 aa5.94□□□□□ -1.46
VTA1-205ENST00000620996 ADM2Q7Z4H4 148 aa5.93□□□□□ -1.46
VTA1-205ENST00000620996 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
VTA1-205ENST00000620996 SPINK6Q6UWN8 80 aa5.91□□□□□ -1.46
VTA1-205ENST00000620996 LINC00208Q96KT6 92 aa5.9□□□□□ -1.46
VTA1-205ENST00000620996 LRP1BQ9NZR2 4599 aa5.9□□□□□ -1.47
VTA1-205ENST00000620996 PKHD1P08F94 4074 aa5.89□□□□□ -1.47
VTA1-205ENST00000620996 CDK2AP2O75956 126 aa5.89□□□□□ -1.47
VTA1-205ENST00000620996 LINC00313P59037 77 aa5.89□□□□□ -1.47
VTA1-205ENST00000620996 A0A087X002 238 aa5.88□□□□□ -1.47
VTA1-205ENST00000620996 LINC00472Q9H8W2 130 aa5.88□□□□□ -1.47
VTA1-205ENST00000620996 NDUFB1O75438 58 aa5.88□□□□□ -1.47
VTA1-205ENST00000620996 SPAG11AQ6PDA7 123 aa5.88□□□□□ -1.47
VTA1-205ENST00000620996 LIMD2Q9BT23 127 aa5.87□□□□□ -1.47
VTA1-205ENST00000620996 A8MWP4 228 aa5.87□□□□□ -1.47
VTA1-205ENST00000620996 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
VTA1-205ENST00000620996 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
VTA1-205ENST00000620996 KMT2CQ8NEZ4 4911 aaKnown RBP5.85□□□□□ -1.47
VTA1-205ENST00000620996 CASC2Q6XLA1 102 aa5.85□□□□□ -1.47
VTA1-205ENST00000620996 RYR2Q92736 4967 aa5.85□□□□□ -1.47
VTA1-205ENST00000620996 A0A1B0GVY2 172 aa5.84□□□□□ -1.47
VTA1-205ENST00000620996 LINC01554Q52M75 96 aa5.84□□□□□ -1.47
VTA1-205ENST00000620996 SSBP3-AS1Q7Z2R9 100 aa5.84□□□□□ -1.47
VTA1-205ENST00000620996 SPINK7P58062 85 aa5.84□□□□□ -1.48
VTA1-205ENST00000620996 KRTAP13-2Q52LG2 175 aa5.84□□□□□ -1.48
VTA1-205ENST00000620996 ZCCHC13Q8WW36 166 aaKnown RBP5.84□□□□□ -1.48
VTA1-205ENST00000620996 CYP4F30PQ9H0H9 118 aa5.84□□□□□ -1.48
VTA1-205ENST00000620996 CDC42SE1Q9NRR8 79 aa5.84□□□□□ -1.48
VTA1-205ENST00000620996 MP68P56378 58 aa5.83□□□□□ -1.48
VTA1-205ENST00000620996 DYNC1H1Q14204 4646 aaKnown RBP5.83□□□□□ -1.48
VTA1-205ENST00000620996 Q96NJ1 140 aa5.82□□□□□ -1.48
VTA1-205ENST00000620996 VPS13BQ7Z7G8 4022 aa5.82□□□□□ -1.48
VTA1-205ENST00000620996 TYMSOSQ8TAI1 123 aa5.81□□□□□ -1.48
VTA1-205ENST00000620996 Q75L30 129 aa5.81□□□□□ -1.48
VTA1-205ENST00000620996 LOC101927531A0A1B0GV80 90 aa5.8□□□□□ -1.48
VTA1-205ENST00000620996 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
VTA1-205ENST00000620996 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
VTA1-205ENST00000620996 COA5Q86WW8 74 aa5.79□□□□□ -1.48
VTA1-205ENST00000620996 A0A1B0GVX0 72 aa5.79□□□□□ -1.48
VTA1-205ENST00000620996 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
VTA1-205ENST00000620996 C8orf17Q9NRJ1 99 aa5.78□□□□□ -1.48
VTA1-205ENST00000620996 H0Y9P7 68 aa5.76□□□□□ -1.49
VTA1-205ENST00000620996 KRTAP29-1A8MX34 341 aaPredicted RBP5.76□□□□□ -1.49
VTA1-205ENST00000620996 NOTCH2NLQ7Z3S9 236 aa5.75□□□□□ -1.49
VTA1-205ENST00000620996 RETNLBQ9BQ08 111 aa5.74□□□□□ -1.49
VTA1-205ENST00000620996 FAT1Q14517 4588 aa5.74□□□□□ -1.49
VTA1-205ENST00000620996 LINC00304Q8N9R0 145 aa5.72□□□□□ -1.49
VTA1-205ENST00000620996 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
VTA1-205ENST00000620996 FAM229AH3BQW9 127 aa5.72□□□□□ -1.49
VTA1-205ENST00000620996 MRPL34Q9BQ48 92 aaKnown RBP5.71□□□□□ -1.5
VTA1-205ENST00000620996 RYR3Q15413 4870 aa5.7□□□□□ -1.5
VTA1-205ENST00000620996 SPINK1P00995 79 aa5.69□□□□□ -1.5
VTA1-205ENST00000620996 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
VTA1-205ENST00000620996 ASB16-AS1Q495Z4 193 aa5.67□□□□□ -1.5
VTA1-205ENST00000620996 Q5VSD8 79 aa5.67□□□□□ -1.5
VTA1-205ENST00000620996 KRTAP10-4P60372 401 aaPredicted RBP5.66□□□□□ -1.5
VTA1-205ENST00000620996 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
VTA1-205ENST00000620996 FLG2Q5D862 2391 aaPredicted RBP5.65□□□□□ -1.51
VTA1-205ENST00000620996 SPANXA2-OT1Q8N9U9 137 aa5.64□□□□□ -1.51
VTA1-205ENST00000620996 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
VTA1-205ENST00000620996 H3BPC8 53 aa5.6□□□□□ -1.51
VTA1-205ENST00000620996 C9orf92A6NGG3 77 aa5.59□□□□□ -1.51
VTA1-205ENST00000620996 Q5W150 140 aa5.59□□□□□ -1.52
VTA1-205ENST00000620996 HRES1P13985 223 aa5.57□□□□□ -1.52
VTA1-205ENST00000620996 IGLV7-46A0A075B6I9 117 aa5.57□□□□□ -1.52
VTA1-205ENST00000620996 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
VTA1-205ENST00000620996 HSPG2P98160 4391 aa5.55□□□□□ -1.52
VTA1-205ENST00000620996 RPS29P62273 56 aaKnown RBP5.55□□□□□ -1.52
VTA1-205ENST00000620996 KIAA1109Q2LD37 5005 aa5.54□□□□□ -1.52
VTA1-205ENST00000620996 RYR1P21817 5038 aa5.54□□□□□ -1.52
VTA1-205ENST00000620996 Q8N1X5 172 aa5.54□□□□□ -1.52
VTA1-205ENST00000620996 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
VTA1-205ENST00000620996 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
VTA1-205ENST00000620996 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
VTA1-205ENST00000620996 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
VTA1-205ENST00000620996 EPPK1P58107 5090 aaKnown RBP5.52□□□□□ -1.53
VTA1-205ENST00000620996 KRTAP17-1Q9BYP8 105 aa5.52□□□□□ -1.53
VTA1-205ENST00000620996 DMBT1Q9UGM3 2413 aaPredicted RBP5.49□□□□□ -1.53
VTA1-205ENST00000620996 PKHD1L1Q86WI1 4243 aa5.49□□□□□ -1.53
VTA1-205ENST00000620996 CRIPTQ9P021 101 aa5.48□□□□□ -1.53
VTA1-205ENST00000620996 A0A1B0GU69 56 aa5.48□□□□□ -1.53
VTA1-205ENST00000620996 KRTAP13-3Q3SY46 172 aa5.47□□□□□ -1.53
VTA1-205ENST00000620996 MIR22HGQ0VDD5 57 aa5.47□□□□□ -1.53
VTA1-205ENST00000620996 KRTAP10-8P60410 259 aa5.47□□□□□ -1.53
VTA1-205ENST00000620996 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
VTA1-205ENST00000620996 ROMO1P60602 79 aa5.45□□□□□ -1.54
VTA1-205ENST00000620996 MYCBP2O75592 4640 aa5.44□□□□□ -1.54
VTA1-205ENST00000620996 TNXBP22105 4242 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms