RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 C8orf87E5RJ46 101 aa11.06□□□□□ -0.64
NEDD4L-237ENST00000617539 DSCR8Q96T75 97 aa11.06□□□□□ -0.64
NEDD4L-237ENST00000617539 RBM12B-AS1Q9P1G2 102 aa11.04□□□□□ -0.64
NEDD4L-237ENST00000617539 BAALC-AS2P0C853 105 aa11.03□□□□□ -0.64
NEDD4L-237ENST00000617539 C9JAW5 83 aa11□□□□□ -0.65
NEDD4L-237ENST00000617539 Q6ZQT0 140 aa11□□□□□ -0.65
NEDD4L-237ENST00000617539 MT1FP04733 61 aa10.99□□□□□ -0.65
NEDD4L-237ENST00000617539 J3KT08 172 aa10.97□□□□□ -0.65
NEDD4L-237ENST00000617539 ZCCHC13Q8WW36 166 aaKnown RBP10.97□□□□□ -0.65
NEDD4L-237ENST00000617539 NAA38Q9BRA0 125 aaKnown RBP10.96□□□□□ -0.65
NEDD4L-237ENST00000617539 C21orf62-AS1Q17RA5 79 aa10.94□□□□□ -0.66
NEDD4L-237ENST00000617539 Q8N9P0 234 aaPredicted RBP10.92□□□□□ -0.66
NEDD4L-237ENST00000617539 SPINK7P58062 85 aa10.91□□□□□ -0.66
NEDD4L-237ENST00000617539 LCE2BO14633 110 aa10.9□□□□□ -0.66
NEDD4L-237ENST00000617539 ATXN8Q156A1 80 aa10.9□□□□□ -0.66
NEDD4L-237ENST00000617539 KRTAP9-3Q9BYQ3 159 aa10.9□□□□□ -0.66
NEDD4L-237ENST00000617539 LOC110117498A0A087WWA1 95 aa10.89□□□□□ -0.67
NEDD4L-237ENST00000617539 A8MWP4 228 aa10.87□□□□□ -0.67
NEDD4L-237ENST00000617539 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.87□□□□□ -0.67
NEDD4L-237ENST00000617539 JMJD7-PLA2G4BH0Y9G9 81 aa10.87□□□□□ -0.67
NEDD4L-237ENST00000617539 M0R143 59 aa10.87□□□□□ -0.67
NEDD4L-237ENST00000617539 IGKV3D-7A0A0C4DH55 119 aa10.86□□□□□ -0.67
NEDD4L-237ENST00000617539 NDUFB1O75438 58 aa10.86□□□□□ -0.67
NEDD4L-237ENST00000617539 KRTAP10-10P60014 251 aa10.86□□□□□ -0.67
NEDD4L-237ENST00000617539 C8orf17Q9NRJ1 99 aa10.86□□□□□ -0.67
NEDD4L-237ENST00000617539 FCGBPQ9Y6R7 5405 aaPredicted RBP10.83□□□□□ -0.68
NEDD4L-237ENST00000617539 A0A1B0GW54 56 aa10.83□□□□□ -0.68
NEDD4L-237ENST00000617539 C14orf132Q9NPU4 83 aa10.83□□□□□ -0.68
NEDD4L-237ENST00000617539 MTURNQ8N3F0 131 aa10.82□□□□□ -0.68
NEDD4L-237ENST00000617539 PDE6GP18545 87 aa10.78□□□□□ -0.68
NEDD4L-237ENST00000617539 Q6ZVQ6 151 aa10.77□□□□□ -0.69
NEDD4L-237ENST00000617539 WFDC13Q8IUB5 93 aa10.77□□□□□ -0.69
NEDD4L-237ENST00000617539 KRTAP9-7A8MTY7 169 aa10.76□□□□□ -0.69
NEDD4L-237ENST00000617539 KRTAP19-1Q8IUB9 90 aa10.76□□□□□ -0.69
NEDD4L-237ENST00000617539 PRR15Q8IV56 129 aa10.75□□□□□ -0.69
NEDD4L-237ENST00000617539 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
NEDD4L-237ENST00000617539 SMIM6P0DI80 62 aa10.72□□□□□ -0.69
NEDD4L-237ENST00000617539 MMP24-AS1A0A0U1RRL7 71 aa10.71□□□□□ -0.69
NEDD4L-237ENST00000617539 NREPQ16612 68 aa10.7□□□□□ -0.7
NEDD4L-237ENST00000617539 TMEM254Q8TBM7 123 aa10.66□□□□□ -0.7
NEDD4L-237ENST00000617539 MRPL34Q9BQ48 92 aaKnown RBP10.66□□□□□ -0.7
NEDD4L-237ENST00000617539 K7EQZ3 153 aa10.64□□□□□ -0.71
NEDD4L-237ENST00000617539 BATFQ16520 125 aa10.64□□□□□ -0.71
NEDD4L-237ENST00000617539 hDV103S1A0JD37 113 aa10.59□□□□□ -0.71
NEDD4L-237ENST00000617539 H3BT86 120 aa10.59□□□□□ -0.71
NEDD4L-237ENST00000617539 TSTD3H0UI37 97 aa10.58□□□□□ -0.72
NEDD4L-237ENST00000617539 C9orf118A6NHY6 69 aa10.57□□□□□ -0.72
NEDD4L-237ENST00000617539 TAX1BP3O14907 124 aa10.55□□□□□ -0.72
NEDD4L-237ENST00000617539 A0A1W2PPM0 123 aa10.54□□□□□ -0.72
NEDD4L-237ENST00000617539 NDUFS5O43920 106 aa10.54□□□□□ -0.72
NEDD4L-237ENST00000617539 H1FX-AS1Q4G0G2 97 aa10.52□□□□□ -0.73
NEDD4L-237ENST00000617539 Q5W150 140 aa10.52□□□□□ -0.73
NEDD4L-237ENST00000617539 KRTAP19-6Q3LI70 58 aa10.51□□□□□ -0.73
NEDD4L-237ENST00000617539 BPY2O14599 106 aa10.5□□□□□ -0.73
NEDD4L-237ENST00000617539 IGKV2D-30A0A075B6S6 120 aa10.47□□□□□ -0.73
NEDD4L-237ENST00000617539 IGKV2-30P06310 120 aa10.47□□□□□ -0.73
NEDD4L-237ENST00000617539 Q8N9L7 120 aa10.47□□□□□ -0.73
NEDD4L-237ENST00000617539 MACF1Q9UPN3 7388 aaKnown RBP10.45□□□□□ -0.74
NEDD4L-237ENST00000617539 C7orf65Q6ZTY9 151 aa10.44□□□□□ -0.74
NEDD4L-237ENST00000617539 LOC105371267A0A1B0GV96 52 aa10.41□□□□□ -0.74
NEDD4L-237ENST00000617539 CASC2Q6XLA1 102 aa10.4□□□□□ -0.74
NEDD4L-237ENST00000617539 SMCPP49901 116 aaPredicted RBP10.39□□□□□ -0.75
NEDD4L-237ENST00000617539 HCG22E2RYF7 251 aa10.37□□□□□ -0.75
NEDD4L-237ENST00000617539 LINC00846Q9NV44 126 aa10.36□□□□□ -0.75
NEDD4L-237ENST00000617539 SPCS1Q9Y6A9 102 aa10.36□□□□□ -0.75
NEDD4L-237ENST00000617539 SYNE2Q8WXH0 6885 aaKnown RBP10.35□□□□□ -0.75
NEDD4L-237ENST00000617539 C4orf26Q17RF5 130 aa10.33□□□□□ -0.76
NEDD4L-237ENST00000617539 CXCL6P80162 114 aa10.29□□□□□ -0.76
NEDD4L-237ENST00000617539 PRO0461Q9UI25 63 aa10.27□□□□□ -0.77
NEDD4L-237ENST00000617539 KRTAP3-1Q9BYR8 98 aa10.23□□□□□ -0.77
NEDD4L-237ENST00000617539 UBL5Q9BZL1 73 aa10.21□□□□□ -0.77
NEDD4L-237ENST00000617539 C5orf47Q569G3 176 aa10.19□□□□□ -0.78
NEDD4L-237ENST00000617539 K7EP34 96 aa10.16□□□□□ -0.78
NEDD4L-237ENST00000617539 COL5A1-AS1Q5SY13 56 aa10.16□□□□□ -0.78
NEDD4L-237ENST00000617539 S4R3F8 94 aa10.11□□□□□ -0.79
NEDD4L-237ENST00000617539 C1orf64Q8NEQ6 169 aa10.09□□□□□ -0.79
NEDD4L-237ENST00000617539 KRTAP6-3Q3LI67 103 aa10.08□□□□□ -0.8
NEDD4L-237ENST00000617539 LCA10Q71F78 164 aa10.08□□□□□ -0.8
NEDD4L-237ENST00000617539 FAM236AA0A1B0GUQ0 79 aa10.06□□□□□ -0.8
NEDD4L-237ENST00000617539 FAM236BA0A1B0GV22 79 aa10.06□□□□□ -0.8
NEDD4L-237ENST00000617539 MT1BP07438 61 aa10.05□□□□□ -0.8
NEDD4L-237ENST00000617539 TP53AIP1Q9HCN2 124 aa10.03□□□□□ -0.8
NEDD4L-237ENST00000617539 CSAG1Q6PB30 78 aa10.02□□□□□ -0.81
NEDD4L-237ENST00000617539 SPRR2GQ9BYE4 73 aa10□□□□□ -0.81
NEDD4L-237ENST00000617539 KRTAP19-8Q3LI54 63 aa9.98□□□□□ -0.81
NEDD4L-237ENST00000617539 ETDBQ3ZM63 59 aa9.96□□□□□ -0.82
NEDD4L-237ENST00000617539 KRTAP3-3Q9BYR6 98 aa9.96□□□□□ -0.82
NEDD4L-237ENST00000617539 Q5VV11 94 aa9.95□□□□□ -0.82
NEDD4L-237ENST00000617539 GTF2H5Q6ZYL4 71 aa9.94□□□□□ -0.82
NEDD4L-237ENST00000617539 F8W1H4 67 aa9.93□□□□□ -0.82
NEDD4L-237ENST00000617539 A6NN06 94 aa9.92□□□□□ -0.82
NEDD4L-237ENST00000617539 CYP4F30PQ9H0H9 118 aa9.91□□□□□ -0.82
NEDD4L-237ENST00000617539 A0A087WVE0 104 aa9.88□□□□□ -0.83
NEDD4L-237ENST00000617539 KLKP1Q107X0 134 aa9.88□□□□□ -0.83
NEDD4L-237ENST00000617539 TRAV22A0A0B4J277 110 aa9.82□□□□□ -0.84
NEDD4L-237ENST00000617539 KRTAP10-5P60370 271 aa9.82□□□□□ -0.84
NEDD4L-237ENST00000617539 LOC101927531A0A1B0GV80 90 aa9.78□□□□□ -0.84
NEDD4L-237ENST00000617539 PCP4L1A6NKN8 68 aa9.77□□□□□ -0.85
NEDD4L-237ENST00000617539 MUC12Q9UKN1 5478 aa9.74□□□□□ -0.85
NEDD4L-237ENST00000617539 NEBP20929 6669 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms