RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 KRTAP13-2Q52LG2 175 aa12.14□□□□□ -0.47
CNTNAP3B-212ENST00000617422 PRR15Q8IV56 129 aa12.14□□□□□ -0.47
CNTNAP3B-212ENST00000617422 H3BPC8 53 aa12.13□□□□□ -0.47
CNTNAP3B-212ENST00000617422 A8MWP4 228 aa12.13□□□□□ -0.47
CNTNAP3B-212ENST00000617422 KRTAP10-4P60372 401 aaPredicted RBP12.12□□□□□ -0.47
CNTNAP3B-212ENST00000617422 CASC2Q6XLA1 102 aa12.12□□□□□ -0.47
CNTNAP3B-212ENST00000617422 LINC00472Q9H8W2 130 aa12.12□□□□□ -0.47
CNTNAP3B-212ENST00000617422 TRAV22A0A0B4J277 110 aa12.11□□□□□ -0.47
CNTNAP3B-212ENST00000617422 Q1T7F1 81 aa12.11□□□□□ -0.47
CNTNAP3B-212ENST00000617422 BRK1Q8WUW1 75 aa12.11□□□□□ -0.47
CNTNAP3B-212ENST00000617422 LINC00208Q96KT6 92 aa12.08□□□□□ -0.48
CNTNAP3B-212ENST00000617422 HSPG2P98160 4391 aa12.07□□□□□ -0.48
CNTNAP3B-212ENST00000617422 H0Y9P7 68 aa12.06□□□□□ -0.48
CNTNAP3B-212ENST00000617422 Q96NJ1 140 aa12.06□□□□□ -0.48
CNTNAP3B-212ENST00000617422 SPINK6Q6UWN8 80 aa12.05□□□□□ -0.48
CNTNAP3B-212ENST00000617422 SPANXA2-OT1Q8N9U9 137 aa12.05□□□□□ -0.48
CNTNAP3B-212ENST00000617422 SSBP3-AS1Q7Z2R9 100 aa12.04□□□□□ -0.48
CNTNAP3B-212ENST00000617422 PLA2G1BP04054 148 aaKnown RBP12.02□□□□□ -0.48
CNTNAP3B-212ENST00000617422 PRR4Q16378 134 aa12.02□□□□□ -0.49
CNTNAP3B-212ENST00000617422 RYR1P21817 5038 aa12□□□□□ -0.49
CNTNAP3B-212ENST00000617422 EPPK1P58107 5090 aaKnown RBP12□□□□□ -0.49
CNTNAP3B-212ENST00000617422 V9GYY9 64 aa11.99□□□□□ -0.49
CNTNAP3B-212ENST00000617422 CD164Q04900 197 aa11.96□□□□□ -0.49
CNTNAP3B-212ENST00000617422 MMP24-AS1A0A0U1RRL7 71 aa11.96□□□□□ -0.5
CNTNAP3B-212ENST00000617422 PKHD1L1Q86WI1 4243 aa11.96□□□□□ -0.5
CNTNAP3B-212ENST00000617422 KIAA1109Q2LD37 5005 aa11.93□□□□□ -0.5
CNTNAP3B-212ENST00000617422 PRR26Q8N8Z3 221 aa11.93□□□□□ -0.5
CNTNAP3B-212ENST00000617422 KRTAP17-1Q9BYP8 105 aa11.93□□□□□ -0.5
CNTNAP3B-212ENST00000617422 TYMSOSQ8TAI1 123 aa11.89□□□□□ -0.51
CNTNAP3B-212ENST00000617422 TP53AIP1Q9HCN2 124 aa11.89□□□□□ -0.51
CNTNAP3B-212ENST00000617422 CDK2AP2O75956 126 aa11.88□□□□□ -0.51
CNTNAP3B-212ENST00000617422 ASB16-AS1Q495Z4 193 aa11.88□□□□□ -0.51
CNTNAP3B-212ENST00000617422 PSPHP1O15172 72 aa11.86□□□□□ -0.51
CNTNAP3B-212ENST00000617422 C1orf195Q5TG92 126 aa11.83□□□□□ -0.52
CNTNAP3B-212ENST00000617422 IGLV7-46A0A075B6I9 117 aa11.82□□□□□ -0.52
CNTNAP3B-212ENST00000617422 C8orf17Q9NRJ1 99 aa11.82□□□□□ -0.52
CNTNAP3B-212ENST00000617422 FAM229AH3BQW9 127 aa11.82□□□□□ -0.52
CNTNAP3B-212ENST00000617422 Q5VSD8 79 aa11.82□□□□□ -0.52
CNTNAP3B-212ENST00000617422 LRP1Q07954 4544 aaKnown RBP11.82□□□□□ -0.52
CNTNAP3B-212ENST00000617422 LIMD2Q9BT23 127 aa11.81□□□□□ -0.52
CNTNAP3B-212ENST00000617422 IGHV6-1A0A0B4J1U7 121 aa11.78□□□□□ -0.52
CNTNAP3B-212ENST00000617422 A8MUN3 132 aa11.78□□□□□ -0.52
CNTNAP3B-212ENST00000617422 NOTCH2NLQ7Z3S9 236 aa11.78□□□□□ -0.52
CNTNAP3B-212ENST00000617422 A0A1B0GVX0 72 aa11.78□□□□□ -0.52
CNTNAP3B-212ENST00000617422 Q8N9P0 234 aaPredicted RBP11.78□□□□□ -0.52
CNTNAP3B-212ENST00000617422 LINC00304Q8N9R0 145 aa11.75□□□□□ -0.53
CNTNAP3B-212ENST00000617422 C4orf48Q5BLP8 95 aa11.74□□□□□ -0.53
CNTNAP3B-212ENST00000617422 SPINK1P00995 79 aa11.74□□□□□ -0.53
CNTNAP3B-212ENST00000617422 Q5VV11 94 aa11.74□□□□□ -0.53
CNTNAP3B-212ENST00000617422 COA5Q86WW8 74 aa11.74□□□□□ -0.53
CNTNAP3B-212ENST00000617422 TNXBP22105 4242 aa11.73□□□□□ -0.53
CNTNAP3B-212ENST00000617422 MRPL34Q9BQ48 92 aaKnown RBP11.71□□□□□ -0.53
CNTNAP3B-212ENST00000617422 PCOTHQ58A44 107 aa11.69□□□□□ -0.54
CNTNAP3B-212ENST00000617422 NDUFS5O43920 106 aa11.69□□□□□ -0.54
CNTNAP3B-212ENST00000617422 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
CNTNAP3B-212ENST00000617422 PRR15LQ9BU68 103 aa11.66□□□□□ -0.54
CNTNAP3B-212ENST00000617422 MYCBP2O75592 4640 aa11.64□□□□□ -0.55
CNTNAP3B-212ENST00000617422 CHKB-CPT1BH3BT56 60 aa11.64□□□□□ -0.55
CNTNAP3B-212ENST00000617422 SPAG11AQ6PDA7 123 aa11.64□□□□□ -0.55
CNTNAP3B-212ENST00000617422 LOC101927531A0A1B0GV80 90 aa11.64□□□□□ -0.55
CNTNAP3B-212ENST00000617422 FLG2Q5D862 2391 aaPredicted RBP11.63□□□□□ -0.55
CNTNAP3B-212ENST00000617422 RPS29P62273 56 aaKnown RBP11.63□□□□□ -0.55
CNTNAP3B-212ENST00000617422 Q8N1X5 172 aa11.62□□□□□ -0.55
CNTNAP3B-212ENST00000617422 Q75L30 129 aa11.61□□□□□ -0.55
CNTNAP3B-212ENST00000617422 KRTAP10-8P60410 259 aa11.58□□□□□ -0.56
CNTNAP3B-212ENST00000617422 PMAIP1Q13794 54 aa11.55□□□□□ -0.56
CNTNAP3B-212ENST00000617422 LINC01558Q9Y6Z2 57 aa11.55□□□□□ -0.56
CNTNAP3B-212ENST00000617422 C8orf87E5RJ46 101 aa11.54□□□□□ -0.56
CNTNAP3B-212ENST00000617422 LINC00313P59037 77 aa11.54□□□□□ -0.56
CNTNAP3B-212ENST00000617422 HRES1P13985 223 aa11.51□□□□□ -0.57
CNTNAP3B-212ENST00000617422 KRTAP16-1A8MUX0 517 aa11.5□□□□□ -0.57
CNTNAP3B-212ENST00000617422 RETNLBQ9BQ08 111 aa11.5□□□□□ -0.57
CNTNAP3B-212ENST00000617422 KRTAP4-5Q9BYR2 181 aa11.5□□□□□ -0.57
CNTNAP3B-212ENST00000617422 A6NED7 52 aa11.49□□□□□ -0.57
CNTNAP3B-212ENST00000617422 KRTAP13-3Q3SY46 172 aa11.48□□□□□ -0.57
CNTNAP3B-212ENST00000617422 A8MU10 97 aa11.47□□□□□ -0.57
CNTNAP3B-212ENST00000617422 MT1HL1P0DM35 61 aa11.45□□□□□ -0.58
CNTNAP3B-212ENST00000617422 Q5W150 140 aa11.44□□□□□ -0.58
CNTNAP3B-212ENST00000617422 ATP11AUNQ6ZP68 121 aa11.44□□□□□ -0.58
CNTNAP3B-212ENST00000617422 DMBT1Q9UGM3 2413 aaPredicted RBP11.43□□□□□ -0.58
CNTNAP3B-212ENST00000617422 LCA10Q71F78 164 aa11.43□□□□□ -0.58
CNTNAP3B-212ENST00000617422 CDC42SE1Q9NRR8 79 aa11.41□□□□□ -0.58
CNTNAP3B-212ENST00000617422 BIRC6Q9NR09 4857 aa11.39□□□□□ -0.59
CNTNAP3B-212ENST00000617422 ACYP2P14621 99 aa11.37□□□□□ -0.59
CNTNAP3B-212ENST00000617422 ABCA13Q86UQ4 5058 aa11.37□□□□□ -0.59
CNTNAP3B-212ENST00000617422 SPTSSBQ8NFR3 76 aa11.35□□□□□ -0.59
CNTNAP3B-212ENST00000617422 C9orf92A6NGG3 77 aa11.34□□□□□ -0.59
CNTNAP3B-212ENST00000617422 SEC61GP60059 68 aa11.32□□□□□ -0.6
CNTNAP3B-212ENST00000617422 HERC2O95714 4834 aa11.31□□□□□ -0.6
CNTNAP3B-212ENST00000617422 DMAC1Q96GE9 116 aa11.3□□□□□ -0.6
CNTNAP3B-212ENST00000617422 KTN1-AS1Q86SY8 53 aa11.27□□□□□ -0.6
CNTNAP3B-212ENST00000617422 SPINK7P58062 85 aa11.26□□□□□ -0.61
CNTNAP3B-212ENST00000617422 A6NN06 94 aa11.24□□□□□ -0.61
CNTNAP3B-212ENST00000617422 IGKV2-30P06310 120 aa11.24□□□□□ -0.61
CNTNAP3B-212ENST00000617422 C20orf166-AS1Q96NR2 134 aa11.18□□□□□ -0.62
CNTNAP3B-212ENST00000617422 A8MUU9 505 aa11.17□□□□□ -0.62
CNTNAP3B-212ENST00000617422 IGKV2D-30A0A075B6S6 120 aa11.09□□□□□ -0.63
CNTNAP3B-212ENST00000617422 A0A1B0GU69 56 aa11.08□□□□□ -0.64
CNTNAP3B-212ENST00000617422 C7orf65Q6ZTY9 151 aa11.07□□□□□ -0.64
CNTNAP3B-212ENST00000617422 XP32Q5T750 250 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms