RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 NOTCH2NLQ7Z3S9 236 aa10.87□□□□□ -0.67
CDH23-212ENST00000616684 FBN2P35556 2912 aa10.82□□□□□ -0.68
CDH23-212ENST00000616684 M0R2T5 61 aa10.82□□□□□ -0.68
CDH23-212ENST00000616684 TNRC18O15417 2968 aaPredicted RBP10.79□□□□□ -0.68
CDH23-212ENST00000616684 HRNRQ86YZ3 2850 aaPredicted RBP10.79□□□□□ -0.68
CDH23-212ENST00000616684 LOC400499M0QZD8 3231 aa10.77□□□□□ -0.68
CDH23-212ENST00000616684 SEC61BP60468 96 aaKnown RBP10.77□□□□□ -0.68
CDH23-212ENST00000616684 R4GN34 69 aa10.77□□□□□ -0.69
CDH23-212ENST00000616684 LUZP6Q538Z0 58 aa10.77□□□□□ -0.69
CDH23-212ENST00000616684 ASB16-AS1Q495Z4 193 aa10.72□□□□□ -0.69
CDH23-212ENST00000616684 USP34Q70CQ2 3546 aa10.72□□□□□ -0.69
CDH23-212ENST00000616684 RPL37P61927 97 aaKnown RBP10.71□□□□□ -0.69
CDH23-212ENST00000616684 KRTAP13-1Q8IUC0 172 aa10.7□□□□□ -0.7
CDH23-212ENST00000616684 H1FX-AS1Q4G0G2 97 aa10.68□□□□□ -0.7
CDH23-212ENST00000616684 SPTBN5Q9NRC6 3674 aaKnown RBP10.67□□□□□ -0.7
CDH23-212ENST00000616684 MYO15AQ9UKN7 3530 aa10.66□□□□□ -0.7
CDH23-212ENST00000616684 TENM3Q9P273 2699 aa10.64□□□□□ -0.71
CDH23-212ENST00000616684 KRTAP13-2Q52LG2 175 aa10.62□□□□□ -0.71
CDH23-212ENST00000616684 SPATA8Q6RVD6 105 aa10.59□□□□□ -0.71
CDH23-212ENST00000616684 H3BS24 57 aa10.58□□□□□ -0.72
CDH23-212ENST00000616684 M0QZ58 72 aa10.57□□□□□ -0.72
CDH23-212ENST00000616684 RPS29P62273 56 aaKnown RBP10.57□□□□□ -0.72
CDH23-212ENST00000616684 ROMO1P60602 79 aa10.56□□□□□ -0.72
CDH23-212ENST00000616684 MXRA5Q9NR99 2828 aa10.51□□□□□ -0.73
CDH23-212ENST00000616684 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
CDH23-212ENST00000616684 TENM1Q9UKZ4 2725 aa10.48□□□□□ -0.73
CDH23-212ENST00000616684 A6NN06 94 aa10.38□□□□□ -0.75
CDH23-212ENST00000616684 CELSR1Q9NYQ6 3014 aa10.36□□□□□ -0.75
CDH23-212ENST00000616684 A8MU10 97 aa10.34□□□□□ -0.75
CDH23-212ENST00000616684 DCHS1Q96JQ0 3298 aa10.33□□□□□ -0.76
CDH23-212ENST00000616684 WDFY3Q8IZQ1 3526 aa10.28□□□□□ -0.76
CDH23-212ENST00000616684 PKD1L1Q8TDX9 2849 aa10.28□□□□□ -0.76
CDH23-212ENST00000616684 A0A0A0MQY5 61 aa10.26□□□□□ -0.77
CDH23-212ENST00000616684 RELNP78509 3460 aa10.23□□□□□ -0.77
CDH23-212ENST00000616684 A8MUU9 505 aa10.22□□□□□ -0.77
CDH23-212ENST00000616684 KRTAP21-3Q3LHN1 58 aa10.22□□□□□ -0.77
CDH23-212ENST00000616684 TENM2Q9NT68 2774 aa10.19□□□□□ -0.78
CDH23-212ENST00000616684 PLAC4Q8WY50 150 aa10.19□□□□□ -0.78
CDH23-212ENST00000616684 C20orf166-AS1Q96NR2 134 aa10.18□□□□□ -0.78
CDH23-212ENST00000616684 KRTAP1-4P0C5Y4 121 aa10.17□□□□□ -0.78
CDH23-212ENST00000616684 KRTAP25-1Q3LHN0 102 aa10.14□□□□□ -0.79
CDH23-212ENST00000616684 PDZD2O15018 2839 aa10.13□□□□□ -0.79
CDH23-212ENST00000616684 TGP01266 2768 aa10.08□□□□□ -0.8
CDH23-212ENST00000616684 VWFP04275 2813 aa10.08□□□□□ -0.8
CDH23-212ENST00000616684 FBN1P35555 2871 aaKnown RBP10.01□□□□□ -0.81
CDH23-212ENST00000616684 ASPMQ8IZT6 3477 aa10.01□□□□□ -0.81
CDH23-212ENST00000616684 ZFHX4Q86UP3 3567 aa9.95□□□□□ -0.82
CDH23-212ENST00000616684 XP32Q5T750 250 aa9.93□□□□□ -0.82
CDH23-212ENST00000616684 LAMA5O15230 3695 aa9.92□□□□□ -0.82
CDH23-212ENST00000616684 KRTAP16-1A8MUX0 517 aa9.89□□□□□ -0.83
CDH23-212ENST00000616684 SRRM2Q9UQ35 2752 aaKnown RBP9.81□□□□□ -0.84
CDH23-212ENST00000616684 OTOGQ6ZRI0 2925 aa9.78□□□□□ -0.84
CDH23-212ENST00000616684 TNP1P09430 55 aa9.77□□□□□ -0.85
CDH23-212ENST00000616684 MUC3AQ02505 3323 aa9.76□□□□□ -0.85
CDH23-212ENST00000616684 H0YAA0 97 aa9.76□□□□□ -0.85
CDH23-212ENST00000616684 NDUFAF8A1L188 74 aa9.74□□□□□ -0.85
CDH23-212ENST00000616684 CSMD1Q96PZ7 3565 aa9.72□□□□□ -0.85
CDH23-212ENST00000616684 DMDP11532 3685 aa9.71□□□□□ -0.85
CDH23-212ENST00000616684 TPRXLQ17RH7 258 aa9.7□□□□□ -0.86
CDH23-212ENST00000616684 SMG1Q96Q15 3661 aaKnown RBP9.65□□□□□ -0.86
CDH23-212ENST00000616684 C10orf95Q9H7T3 257 aa9.64□□□□□ -0.87
CDH23-212ENST00000616684 KRTAP13-3Q3SY46 172 aa9.64□□□□□ -0.87
CDH23-212ENST00000616684 A0A1B0GVY2 172 aa9.58□□□□□ -0.88
CDH23-212ENST00000616684 P0C880 135 aa9.57□□□□□ -0.88
CDH23-212ENST00000616684 ZFHX3Q15911 3703 aa9.56□□□□□ -0.88
CDH23-212ENST00000616684 FBN3Q75N90 2809 aa9.55□□□□□ -0.88
CDH23-212ENST00000616684 NBPF19A0A087WUL8 3843 aa9.54□□□□□ -0.88
CDH23-212ENST00000616684 PP632Q6XCG6 107 aa9.52□□□□□ -0.89
CDH23-212ENST00000616684 KRTAP10-8P60410 259 aa9.52□□□□□ -0.89
CDH23-212ENST00000616684 CUBNO60494 3623 aa9.51□□□□□ -0.89
CDH23-212ENST00000616684 SVEP1Q4LDE5 3571 aa9.5□□□□□ -0.89
CDH23-212ENST00000616684 COL7A1Q02388 2944 aa9.36□□□□□ -0.91
CDH23-212ENST00000616684 MEGF8Q7Z7M0 2845 aa9.35□□□□□ -0.91
CDH23-212ENST00000616684 KRTAP10-10P60014 251 aa9.34□□□□□ -0.91
CDH23-212ENST00000616684 CSMD2Q7Z408 3487 aa9.32□□□□□ -0.92
CDH23-212ENST00000616684 SPENQ96T58 3664 aaKnown RBP9.25□□□□□ -0.93
CDH23-212ENST00000616684 KRTAP3-1Q9BYR8 98 aa9.18□□□□□ -0.94
CDH23-212ENST00000616684 KRTAP12-2P59991 146 aa9.14□□□□□ -0.95
CDH23-212ENST00000616684 TRRAPQ9Y4A5 3859 aa9.14□□□□□ -0.95
CDH23-212ENST00000616684 ANK3Q12955 4377 aaKnown RBP9.11□□□□□ -0.95
CDH23-212ENST00000616684 PRO2289Q9P1D8 64 aa9.08□□□□□ -0.96
CDH23-212ENST00000616684 KRTAP12-1P59990 96 aa9.03□□□□□ -0.96
CDH23-212ENST00000616684 KRTAP13-4Q3LI77 160 aa8.91□□□□□ -0.98
CDH23-212ENST00000616684 KRTAP10-6P60371 365 aaPredicted RBP8.89□□□□□ -0.99
CDH23-212ENST00000616684 MT1HL1P0DM35 61 aa8.77□□□□□ -1.01
CDH23-212ENST00000616684 BSNQ9UPA5 3926 aa8.75□□□□□ -1.01
CDH23-212ENST00000616684 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
CDH23-212ENST00000616684 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
CDH23-212ENST00000616684 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
CDH23-212ENST00000616684 VPS13CQ709C8 3753 aa8.56□□□□□ -1.04
CDH23-212ENST00000616684 HUWE1Q7Z6Z7 4374 aaKnown RBP8.54□□□□□ -1.04
CDH23-212ENST00000616684 KRTAP4-5Q9BYR2 181 aa8.45□□□□□ -1.06
CDH23-212ENST00000616684 KRTAP15-1Q3LI76 137 aa8.41□□□□□ -1.06
CDH23-212ENST00000616684 CSMD3Q7Z407 3707 aa8.35□□□□□ -1.07
CDH23-212ENST00000616684 ZNF469Q96JG9 3925 aaPredicted RBP8.24□□□□□ -1.09
CDH23-212ENST00000616684 DNAH5Q8TE73 4624 aa8.2□□□□□ -1.1
CDH23-212ENST00000616684 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
CDH23-212ENST00000616684 KRTAP10-12P60413 245 aa8.15□□□□□ -1.1
CDH23-212ENST00000616684 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
CDH23-212ENST00000616684 PLECQ15149 4684 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms